RNA–Protein interactions for RNA: ENST00000575333.5

TOM1L1-220, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene TOM1L1, Length 1,849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-220ENST00000575333 HNRNPH1P31943 449 aaKnown RBP9.28□□□□□ -0.92
TOM1L1-220ENST00000575333 DHX8Q14562 1220 aaKnown RBP9.28□□□□□ -0.92
TOM1L1-220ENST00000575333 ARSIQ5FYB1 569 aa9.28□□□□□ -0.92
TOM1L1-220ENST00000575333 ANKRD45Q5TZF3 282 aa9.28□□□□□ -0.92
TOM1L1-220ENST00000575333 SMYD5Q6GMV2 418 aa9.28□□□□□ -0.92
TOM1L1-220ENST00000575333 RBM12BQ8IXT5 1001 aaKnown RBP9.28□□□□□ -0.92
TOM1L1-220ENST00000575333 CTCFLQ8NI51 663 aaPredicted RBP9.28□□□□□ -0.92
TOM1L1-220ENST00000575333 CRACR2AQ9BSW2 395 aa9.28□□□□□ -0.92
TOM1L1-220ENST00000575333 ACBD3Q9H3P7 528 aa9.28□□□□□ -0.92
TOM1L1-220ENST00000575333 PDRG1Q9NUG6 133 aa9.28□□□□□ -0.92
TOM1L1-220ENST00000575333 PCDHB15Q9Y5E8 787 aa9.28□□□□□ -0.92
TOM1L1-220ENST00000575333 ATXN2Q99700 1313 aaKnown RBP9.28□□□□□ -0.92
TOM1L1-220ENST00000575333 CDC42BPAQ5VT25 1732 aa9.27□□□□□ -0.92
TOM1L1-220ENST00000575333 BCAR3O75815 825 aa9.27□□□□□ -0.93
TOM1L1-220ENST00000575333 CDKL5O76039 1030 aa9.27□□□□□ -0.93
TOM1L1-220ENST00000575333 CD2BP2O95400 341 aaKnown RBP9.27□□□□□ -0.93
TOM1L1-220ENST00000575333 CASTP20810 708 aaKnown RBP9.27□□□□□ -0.93
TOM1L1-220ENST00000575333 PREPLQ4J6C6 727 aaPredicted RBP9.27□□□□□ -0.93
TOM1L1-220ENST00000575333 AMOTQ4VCS5 1084 aa9.27□□□□□ -0.93
TOM1L1-220ENST00000575333 WDR63Q8IWG1 891 aa9.27□□□□□ -0.93
TOM1L1-220ENST00000575333 BICD2Q8TD16 824 aa9.27□□□□□ -0.93
TOM1L1-220ENST00000575333 CABS1Q96KC9 395 aa9.27□□□□□ -0.93
TOM1L1-220ENST00000575333 KDRP35968 1356 aa9.27□□□□□ -0.93
TOM1L1-220ENST00000575333 PLCH2O75038 1416 aa9.27□□□□□ -0.93
TOM1L1-220ENST00000575333 ARHGAP5Q13017 1502 aa9.27□□□□□ -0.93
TOM1L1-220ENST00000575333 KDM4FA0A1W2PPD8 638 aa9.26□□□□□ -0.93
TOM1L1-220ENST00000575333 FANCAO15360 1455 aa9.26□□□□□ -0.93
TOM1L1-220ENST00000575333 RLBP1P12271 317 aa9.26□□□□□ -0.93
TOM1L1-220ENST00000575333 PECAM1P16284 738 aaPredicted RBP9.26□□□□□ -0.93
TOM1L1-220ENST00000575333 PTGS1P23219 599 aa9.26□□□□□ -0.93
TOM1L1-220ENST00000575333 CHMLP26374 656 aa9.26□□□□□ -0.93
TOM1L1-220ENST00000575333 PDIA5Q14554 519 aa9.26□□□□□ -0.93
TOM1L1-220ENST00000575333 ARHGAP29Q52LW3 1261 aa9.26□□□□□ -0.93
TOM1L1-220ENST00000575333 HDGFL1Q5TGJ6 251 aa9.26□□□□□ -0.93
TOM1L1-220ENST00000575333 ZSCAN25Q6NSZ9 544 aa9.26□□□□□ -0.93
TOM1L1-220ENST00000575333 N4BP2L2Q92802 583 aaPredicted RBP9.26□□□□□ -0.93
TOM1L1-220ENST00000575333 CDC42BPBQ9Y5S2 1711 aa9.26□□□□□ -0.93
TOM1L1-220ENST00000575333 PREX2Q70Z35 1606 aa9.26□□□□□ -0.93
TOM1L1-220ENST00000575333 PRDM15P57071 1507 aaPredicted RBP9.26□□□□□ -0.93
TOM1L1-220ENST00000575333 CCDC141Q6ZP82 1450 aa9.26□□□□□ -0.93
TOM1L1-220ENST00000575333 NUDT7P0C024 238 aa9.26□□□□□ -0.93
TOM1L1-220ENST00000575333 HCLS1P14317 486 aaPredicted RBP9.26□□□□□ -0.93
TOM1L1-220ENST00000575333 PTGER2P43116 358 aa9.26□□□□□ -0.93
TOM1L1-220ENST00000575333 MCM2P49736 904 aa9.26□□□□□ -0.93
TOM1L1-220ENST00000575333 SLC8A3P57103 927 aa9.26□□□□□ -0.93
TOM1L1-220ENST00000575333 MYBPC2Q14324 1141 aa9.26□□□□□ -0.93
TOM1L1-220ENST00000575333 RCSD1Q6JBY9 416 aa9.26□□□□□ -0.93
TOM1L1-220ENST00000575333 GPR153Q6NV75 609 aa9.26□□□□□ -0.93
TOM1L1-220ENST00000575333 UBXN4Q92575 508 aa9.26□□□□□ -0.93
TOM1L1-220ENST00000575333 SLC24A3Q9HC58 644 aa9.26□□□□□ -0.93
TOM1L1-220ENST00000575333 KDM6BO15054 1643 aa9.25□□□□□ -0.93
TOM1L1-220ENST00000575333 RTN2O75298 545 aa9.25□□□□□ -0.93
TOM1L1-220ENST00000575333 BRD1O95696 1058 aa9.25□□□□□ -0.93
TOM1L1-220ENST00000575333 MCM6Q14566 821 aa9.25□□□□□ -0.93
TOM1L1-220ENST00000575333 HSP90B2PQ58FF3 399 aa9.25□□□□□ -0.93
TOM1L1-220ENST00000575333 EFCAB2Q5VUJ9 269 aa9.25□□□□□ -0.93
TOM1L1-220ENST00000575333 DDX46Q7L014 1031 aaKnown RBP9.25□□□□□ -0.93
TOM1L1-220ENST00000575333 RANBP17Q9H2T7 1088 aaKnown RBP9.25□□□□□ -0.93
TOM1L1-220ENST00000575333 BATF3Q9NR55 127 aa9.25□□□□□ -0.93
TOM1L1-220ENST00000575333 ORC3Q9UBD5 711 aaPredicted RBP9.25□□□□□ -0.93
TOM1L1-220ENST00000575333 ZNF777Q9ULD5 760 aaPredicted RBP9.25□□□□□ -0.93
TOM1L1-220ENST00000575333 NSFL1CQ9UNZ2 370 aaKnown RBP9.25□□□□□ -0.93
TOM1L1-220ENST00000575333 EXOC6BQ9Y2D4 811 aa9.25□□□□□ -0.93
TOM1L1-220ENST00000575333 GPATCH8Q9UKJ3 1502 aaKnown RBP9.25□□□□□ -0.93
TOM1L1-220ENST00000575333 PIK3C2GO75747 1445 aa9.25□□□□□ -0.93
TOM1L1-220ENST00000575333 EFCAB8A8MWE9 144 aa9.24□□□□□ -0.93
TOM1L1-220ENST00000575333 TBC1D8O95759 1140 aa9.24□□□□□ -0.93
TOM1L1-220ENST00000575333 CCDC192P0DO97 292 aa9.24□□□□□ -0.93
TOM1L1-220ENST00000575333 OSBPP22059 807 aa9.24□□□□□ -0.93
TOM1L1-220ENST00000575333 SCRN1Q12765 414 aa9.24□□□□□ -0.93
TOM1L1-220ENST00000575333 SF3A1Q15459 793 aaKnown RBP9.24□□□□□ -0.93
TOM1L1-220ENST00000575333 FILIP1LQ4L180 1135 aa9.24□□□□□ -0.93
TOM1L1-220ENST00000575333 CCDC93Q567U6 631 aa9.24□□□□□ -0.93
TOM1L1-220ENST00000575333 WLSQ5T9L3 541 aa9.24□□□□□ -0.93
TOM1L1-220ENST00000575333 NCAPG2Q86XI2 1143 aa9.24□□□□□ -0.93
TOM1L1-220ENST00000575333 SDR16C5Q8N3Y7 309 aa9.24□□□□□ -0.93
TOM1L1-220ENST00000575333 PRPF38AQ8NAV1 312 aaKnown RBP9.24□□□□□ -0.93
TOM1L1-220ENST00000575333 PANK1Q8TE04 598 aa9.24□□□□□ -0.93
TOM1L1-220ENST00000575333 FUCA2Q9BTY2 467 aa9.24□□□□□ -0.93
TOM1L1-220ENST00000575333 ARFGAP3Q9NP61 516 aa9.24□□□□□ -0.93
TOM1L1-220ENST00000575333 MYO6Q9UM54 1294 aa9.24□□□□□ -0.93
TOM1L1-220ENST00000575333 ZDHHC9Q9Y397 364 aa9.24□□□□□ -0.93
TOM1L1-220ENST00000575333 CLTCL1P53675 1640 aa9.24□□□□□ -0.93
TOM1L1-220ENST00000575333 NEO1Q92859 1461 aa9.24□□□□□ -0.93
TOM1L1-220ENST00000575333 ITSN2Q9NZM3 1697 aa9.24□□□□□ -0.93
TOM1L1-220ENST00000575333 EPB41L2O43491 1005 aaKnown RBP9.24□□□□□ -0.93
TOM1L1-220ENST00000575333 POLD1P28340 1107 aa9.24□□□□□ -0.93
TOM1L1-220ENST00000575333 KCNJ6P48051 423 aa9.24□□□□□ -0.93
TOM1L1-220ENST00000575333 PSMD2Q13200 908 aa9.24□□□□□ -0.93
TOM1L1-220ENST00000575333 ERCC6LQ2NKX8 1250 aa9.24□□□□□ -0.93
TOM1L1-220ENST00000575333 EXOC8Q8IYI6 725 aa9.24□□□□□ -0.93
TOM1L1-220ENST00000575333 FAM200AQ8TCP9 573 aa9.24□□□□□ -0.93
TOM1L1-220ENST00000575333 MICAL1Q8TDZ2 1067 aa9.24□□□□□ -0.93
TOM1L1-220ENST00000575333 PIK3R5Q8WYR1 880 aa9.24□□□□□ -0.93
TOM1L1-220ENST00000575333 CFDP1Q9UEE9 299 aaPredicted RBP9.24□□□□□ -0.93
TOM1L1-220ENST00000575333 ODF2LQ9ULJ1 636 aa9.24□□□□□ -0.93
TOM1L1-220ENST00000575333 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.24□□□□□ -0.934e-6■■□□□ 13.8
TOM1L1-220ENST00000575333 ARAP3Q8WWN8 1544 aa9.23□□□□□ -0.93
TOM1L1-220ENST00000575333 RIMBP2O15034 1052 aa9.23□□□□□ -0.93
TOM1L1-220ENST00000575333 PER1O15534 1290 aaPredicted RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms