RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 MPNDQ8N594 471 aa15.78■□□□□ 0.12
CTNS-208ENST00000574218 ZC3H15Q8WU90 426 aaKnown RBP15.78■□□□□ 0.12
CTNS-208ENST00000574218 ERBB4Q15303 1308 aa15.77■□□□□ 0.12
CTNS-208ENST00000574218 H7C1D1 291 aa15.77■□□□□ 0.12
CTNS-208ENST00000574218 GIGYF2Q6Y7W6 1299 aaKnown RBP15.77■□□□□ 0.12
CTNS-208ENST00000574218 ZNF34Q8IZ26 560 aa15.77■□□□□ 0.12
CTNS-208ENST00000574218 UTP14AQ9BVJ6 771 aaKnown RBP15.77■□□□□ 0.12
CTNS-208ENST00000574218 ABCC4O15439 1325 aa15.76■□□□□ 0.11
CTNS-208ENST00000574218 RAD17O75943 681 aa15.76■□□□□ 0.11
CTNS-208ENST00000574218 HUNKP57058 714 aa15.76■□□□□ 0.11
CTNS-208ENST00000574218 DDX60Q8IY21 1712 aaKnown RBP15.75■□□□□ 0.11
CTNS-208ENST00000574218 BBOX1O75936 387 aa15.75■□□□□ 0.11
CTNS-208ENST00000574218 PPP2R1AP30153 589 aa15.75■□□□□ 0.11
CTNS-208ENST00000574218 EIF4A1P60842 406 aaKnown RBP15.75■□□□□ 0.11
CTNS-208ENST00000574218 C3orf67Q6ZVT6 689 aa15.75■□□□□ 0.11
CTNS-208ENST00000574218 DDX46Q7L014 1031 aaKnown RBP15.75■□□□□ 0.11
CTNS-208ENST00000574218 CNKSR2Q8WXI2 1034 aa15.75■□□□□ 0.11
CTNS-208ENST00000574218 RTFDC1Q9BY42 306 aaPredicted RBP15.75■□□□□ 0.11
CTNS-208ENST00000574218 PGAP2Q9UHJ9 254 aa15.75■□□□□ 0.11
CTNS-208ENST00000574218 TAF1P21675 1872 aa15.75■□□□□ 0.11
CTNS-208ENST00000574218 KIAA2012Q0VF49 1180 aa15.74■□□□□ 0.11
CTNS-208ENST00000574218 SLC51AQ86UW1 340 aa15.74■□□□□ 0.11
CTNS-208ENST00000574218 SP8Q8IXZ3 490 aa15.74■□□□□ 0.11
CTNS-208ENST00000574218 CNOT7Q9UIV1 285 aaKnown RBP15.74■□□□□ 0.11
CTNS-208ENST00000574218 HSP90AB3PQ58FF7 597 aa15.73■□□□□ 0.11
CTNS-208ENST00000574218 USP48Q86UV5 1035 aa15.73■□□□□ 0.11
CTNS-208ENST00000574218 TRPM4Q8TD43 1214 aa15.73■□□□□ 0.11
CTNS-208ENST00000574218 MAPK8IP3Q9UPT6 1336 aa15.72■□□□□ 0.11
CTNS-208ENST00000574218 SLC10A5Q5PT55 438 aa15.72■□□□□ 0.11
CTNS-208ENST00000574218 C2orf69Q8N8R5 385 aa15.72■□□□□ 0.11
CTNS-208ENST00000574218 EIF2S2P20042 333 aaKnown RBP15.71■□□□□ 0.11
CTNS-208ENST00000574218 HIRAP54198 1017 aaPredicted RBP15.71■□□□□ 0.11
CTNS-208ENST00000574218 RGMBQ6NW40 437 aa15.71■□□□□ 0.11
CTNS-208ENST00000574218 TMC4Q7Z404 712 aa15.71■□□□□ 0.11
CTNS-208ENST00000574218 MICALL2Q8IY33 904 aa15.71■□□□□ 0.11
CTNS-208ENST00000574218 PNNQ9H307 717 aaKnown RBP15.71■□□□□ 0.11
CTNS-208ENST00000574218 SAGE1Q9NXZ1 904 aa15.71■□□□□ 0.11
CTNS-208ENST00000574218 TSPYL4Q9UJ04 414 aa15.71■□□□□ 0.11
CTNS-208ENST00000574218 LRRC37AA6NMS7 1700 aa15.71■□□□□ 0.1
CTNS-208ENST00000574218 GRAPQ13588 217 aa15.7■□□□□ 0.1
CTNS-208ENST00000574218 NFE2L2Q16236 605 aa15.7■□□□□ 0.1
CTNS-208ENST00000574218 KRT26Q7Z3Y9 468 aa15.7■□□□□ 0.1
CTNS-208ENST00000574218 GRAPLQ8TC17 118 aaPredicted RBP15.7■□□□□ 0.1
CTNS-208ENST00000574218 CCDC102AQ96A19 550 aa15.7■□□□□ 0.1
CTNS-208ENST00000574218 DCPSQ96C86 337 aaKnown RBP15.7■□□□□ 0.1
CTNS-208ENST00000574218 THUMPD2Q9BTF0 503 aaKnown RBP15.7■□□□□ 0.1
CTNS-208ENST00000574218 GBA2Q9HCG7 927 aaPredicted RBP15.7■□□□□ 0.1
CTNS-208ENST00000574218 TNRC18O15417 2968 aaPredicted RBP15.7■□□□□ 0.1
CTNS-208ENST00000574218 HCLS1P14317 486 aaPredicted RBP15.69■□□□□ 0.1
CTNS-208ENST00000574218 DPF2Q92785 391 aa15.69■□□□□ 0.1
CTNS-208ENST00000574218 TRMT112Q9UI30 125 aaKnown RBP15.69■□□□□ 0.1
CTNS-208ENST00000574218 ZNF157P51786 506 aaPredicted RBP15.68■□□□□ 0.1
CTNS-208ENST00000574218 SOX10P56693 466 aa15.68■□□□□ 0.1
CTNS-208ENST00000574218 WASHC4Q2M389 1173 aa15.68■□□□□ 0.1
CTNS-208ENST00000574218 SH3TC1Q8TE82 1336 aa15.68■□□□□ 0.1
CTNS-208ENST00000574218 SHTN1A0MZ66 631 aa15.67■□□□□ 0.1
CTNS-208ENST00000574218 KIF23Q02241 960 aaPredicted RBP15.67■□□□□ 0.1
CTNS-208ENST00000574218 AIMP1Q12904 312 aaKnown RBP15.67■□□□□ 0.1
CTNS-208ENST00000574218 TBC1D10BQ4KMP7 808 aaPredicted RBP15.67■□□□□ 0.1
CTNS-208ENST00000574218 RBM26Q5T8P6 1007 aaKnown RBP15.67■□□□□ 0.1
CTNS-208ENST00000574218 SAMD7Q7Z3H4 446 aa15.67■□□□□ 0.1
CTNS-208ENST00000574218 NLRP10Q86W26 655 aa15.67■□□□□ 0.1
CTNS-208ENST00000574218 ZIC5Q96T25 663 aa15.67■□□□□ 0.1
CTNS-208ENST00000574218 ZBTB12Q9Y330 459 aaPredicted RBP15.67■□□□□ 0.1
CTNS-208ENST00000574218 DUOX1Q9NRD9 1551 aa15.66■□□□□ 0.1
CTNS-208ENST00000574218 YDJCA8MPS7 323 aa15.66■□□□□ 0.1
CTNS-208ENST00000574218 C6orf229H3BNL8 230 aa15.66■□□□□ 0.1
CTNS-208ENST00000574218 PSMD14O00487 310 aa15.66■□□□□ 0.1
CTNS-208ENST00000574218 TRPA1O75762 1119 aa15.66■□□□□ 0.1
CTNS-208ENST00000574218 RPS12P25398 132 aaKnown RBP15.66■□□□□ 0.1
CTNS-208ENST00000574218 SULF1Q8IWU6 871 aa15.66■□□□□ 0.1
CTNS-208ENST00000574218 EYA3Q99504 573 aa15.66■□□□□ 0.1
CTNS-208ENST00000574218 DBNDD1Q9H9R9 158 aa15.66■□□□□ 0.1
CTNS-208ENST00000574218 NSFL1CQ9UNZ2 370 aaKnown RBP15.66■□□□□ 0.1
CTNS-208ENST00000574218 G3V3G9 751 aa15.65■□□□□ 0.1
CTNS-208ENST00000574218 RIMBP2O15034 1052 aa15.65■□□□□ 0.1
CTNS-208ENST00000574218 ANXA1P04083 346 aa15.65■□□□□ 0.1
CTNS-208ENST00000574218 DCAF8Q5TAQ9 597 aa15.65■□□□□ 0.1
CTNS-208ENST00000574218 ADM5C9JUS6 153 aa15.64■□□□□ 0.09
CTNS-208ENST00000574218 TCIRG1Q13488 830 aa15.64■□□□□ 0.09
CTNS-208ENST00000574218 COPS6Q7L5N1 327 aa15.64■□□□□ 0.09
CTNS-208ENST00000574218 CTU1Q7Z7A3 348 aaKnown RBP15.64■□□□□ 0.09
CTNS-208ENST00000574218 REM2Q8IYK8 340 aaPredicted RBP15.64■□□□□ 0.09
CTNS-208ENST00000574218 XAGE3Q8WTP9 111 aa15.64■□□□□ 0.09
CTNS-208ENST00000574218 NECTIN2Q92692 538 aa15.64■□□□□ 0.09
CTNS-208ENST00000574218 RNF186Q9NXI6 227 aa15.64■□□□□ 0.09
CTNS-208ENST00000574218 FAM155AB1AL88 458 aaPredicted RBP15.63■□□□□ 0.09
CTNS-208ENST00000574218 ECE2O60344 883 aa15.63■□□□□ 0.09
CTNS-208ENST00000574218 PDIA6Q15084 440 aa15.63■□□□□ 0.09
CTNS-208ENST00000574218 PROSER3Q2NL68 480 aa15.63■□□□□ 0.09
CTNS-208ENST00000574218 KIF4BQ2VIQ3 1234 aa15.63■□□□□ 0.09
CTNS-208ENST00000574218 DLK2Q6UY11 383 aa15.63■□□□□ 0.09
CTNS-208ENST00000574218 SLC10A3P09131 477 aa15.62■□□□□ 0.09
CTNS-208ENST00000574218 PRPF38BQ5VTL8 546 aaKnown RBP15.62■□□□□ 0.09
CTNS-208ENST00000574218 LRP10Q7Z4F1 713 aa15.62■□□□□ 0.09
CTNS-208ENST00000574218 PLEKHF1Q96S99 279 aa15.62■□□□□ 0.09
CTNS-208ENST00000574218 BABAM1Q9NWV8 329 aa15.62■□□□□ 0.09
CTNS-208ENST00000574218 PSME4Q14997 1843 aa15.61■□□□□ 0.09
CTNS-208ENST00000574218 LMOD3Q0VAK6 560 aa15.61■□□□□ 0.09
CTNS-208ENST00000574218 DOK7Q18PE1 504 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms