RNA–Protein interactions for RNA: ENST00000572949.5

USP6-204, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 2

Gene USP6, Length 7,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-204ENST00000572949 MICU3Q86XE3 530 aa10.81□□□□□ -0.68
USP6-204ENST00000572949 SPC25Q9HBM1 224 aa10.81□□□□□ -0.68
USP6-204ENST00000572949 IARSP41252 1262 aaKnown RBP10.81□□□□□ -0.68
USP6-204ENST00000572949 CHRNA2Q15822 529 aa10.81□□□□□ -0.68
USP6-204ENST00000572949 MAK16Q9BXY0 300 aaKnown RBP10.81□□□□□ -0.68
USP6-204ENST00000572949 CACYBPQ9HB71 228 aaKnown RBP10.81□□□□□ -0.68
USP6-204ENST00000572949 GJC1P36383 396 aa10.8□□□□□ -0.68
USP6-204ENST00000572949 CCT6BQ92526 530 aa10.8□□□□□ -0.68
USP6-204ENST00000572949 PFDN4Q9NQP4 134 aa10.8□□□□□ -0.68
USP6-204ENST00000572949 NIP7Q9Y221 180 aaKnown RBP eCLIP10.8□□□□□ -0.68
USP6-204ENST00000572949 MXRA7P84157 204 aa10.8□□□□□ -0.68
USP6-204ENST00000572949 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.8□□□□□ -0.68
USP6-204ENST00000572949 TPTE2Q6XPS3 522 aa10.8□□□□□ -0.68
USP6-204ENST00000572949 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.8□□□□□ -0.68
USP6-204ENST00000572949 CYP7A1P22680 504 aa10.8□□□□□ -0.68
USP6-204ENST00000572949 METAP2P50579 478 aaKnown RBP eCLIP10.8□□□□□ -0.68
USP6-204ENST00000572949 CUL4BQ13620 913 aa10.8□□□□□ -0.68
USP6-204ENST00000572949 PDE3AQ14432 1141 aa10.8□□□□□ -0.68
USP6-204ENST00000572949 FERMT3Q86UX7 667 aa10.8□□□□□ -0.68
USP6-204ENST00000572949 MAP3K2Q9Y2U5 619 aa10.8□□□□□ -0.68
USP6-204ENST00000572949 NOP56O00567 594 aaKnown RBP10.8□□□□□ -0.68
USP6-204ENST00000572949 UQCRFS1P1P0C7P4 283 aa10.8□□□□□ -0.68
USP6-204ENST00000572949 CFAP58Q5T655 872 aa10.8□□□□□ -0.68
USP6-204ENST00000572949 RPAP2Q8IXW5 612 aaPredicted RBP10.8□□□□□ -0.68
USP6-204ENST00000572949 SLC26A6Q9BXS9 759 aa10.8□□□□□ -0.68
USP6-204ENST00000572949 GINS2Q9Y248 185 aa10.8□□□□□ -0.68
USP6-204ENST00000572949 GMNNO75496 209 aa10.79□□□□□ -0.68
USP6-204ENST00000572949 CRCPO75575 148 aa10.79□□□□□ -0.68
USP6-204ENST00000572949 PAIP2Q9BPZ3 127 aaKnown RBP10.79□□□□□ -0.68
USP6-204ENST00000572949 GRIN2BQ13224 1484 aa10.79□□□□□ -0.68
USP6-204ENST00000572949 MX1P20591 662 aa10.79□□□□□ -0.68
USP6-204ENST00000572949 CCDC89Q8N998 374 aa10.79□□□□□ -0.68
USP6-204ENST00000572949 DNAAF4Q8WXU2 420 aa10.79□□□□□ -0.68
USP6-204ENST00000572949 SNRKQ9NRH2 765 aa10.79□□□□□ -0.68
USP6-204ENST00000572949 NSFL1CQ9UNZ2 370 aaKnown RBP10.79□□□□□ -0.68
USP6-204ENST00000572949 NAA16Q6N069 864 aaPredicted RBP10.79□□□□□ -0.68
USP6-204ENST00000572949 TNPO1Q92973 898 aaKnown RBP10.79□□□□□ -0.68
USP6-204ENST00000572949 CLIP2Q9UDT6 1046 aa10.79□□□□□ -0.68
USP6-204ENST00000572949 FAM169AQ9Y6X4 670 aa10.79□□□□□ -0.68
USP6-204ENST00000572949 PLCG2P16885 1265 aa10.79□□□□□ -0.68
USP6-204ENST00000572949 GEN1Q17RS7 908 aa10.79□□□□□ -0.68
USP6-204ENST00000572949 HAUS2Q9NVX0 235 aa10.79□□□□□ -0.68
USP6-204ENST00000572949 LMTK3Q96Q04 1460 aa10.78□□□□□ -0.68
USP6-204ENST00000572949 PLCB3Q01970 1234 aa10.78□□□□□ -0.68
USP6-204ENST00000572949 WTAPQ15007 396 aa10.78□□□□□ -0.68
USP6-204ENST00000572949 UBE3BQ7Z3V4 1068 aa10.78□□□□□ -0.68
USP6-204ENST00000572949 ZCRB1Q8TBF4 217 aaKnown RBP10.78□□□□□ -0.68
USP6-204ENST00000572949 TPD52P55327 224 aaPredicted RBP10.78□□□□□ -0.68
USP6-204ENST00000572949 KANK3Q6NY19 840 aa10.78□□□□□ -0.68
USP6-204ENST00000572949 CCDC50Q8IVM0 306 aa10.78□□□□□ -0.68
USP6-204ENST00000572949 SH2D4AQ9H788 454 aa10.78□□□□□ -0.68
USP6-204ENST00000572949 STAT6P42226 847 aa10.78□□□□□ -0.68
USP6-204ENST00000572949 NAPAP54920 295 aa10.78□□□□□ -0.68
USP6-204ENST00000572949 ARID5AQ03989 594 aa10.78□□□□□ -0.68
USP6-204ENST00000572949 CCDC155Q8N6L0 562 aa10.78□□□□□ -0.68
USP6-204ENST00000572949 SPAG5Q96R06 1193 aa10.78□□□□□ -0.68
USP6-204ENST00000572949 PPP1R9BQ96SB3 815 aa10.78□□□□□ -0.68
USP6-204ENST00000572949 SPECC1LQ69YQ0 1117 aa10.78□□□□□ -0.68
USP6-204ENST00000572949 GTF3C6Q969F1 213 aa10.78□□□□□ -0.68
USP6-204ENST00000572949 IQSEC3Q9UPP2 1182 aaPredicted RBP10.78□□□□□ -0.68
USP6-204ENST00000572949 HAND2P61296 217 aa10.78□□□□□ -0.68
USP6-204ENST00000572949 ANAPC4Q9UJX5 808 aa10.78□□□□□ -0.68
USP6-204ENST00000572949 ATP2A1O14983 1001 aa10.78□□□□□ -0.68
USP6-204ENST00000572949 CEBPAP49715 358 aaPredicted RBP10.78□□□□□ -0.68
USP6-204ENST00000572949 GNAQP50148 359 aa10.78□□□□□ -0.68
USP6-204ENST00000572949 TRIM47Q96LD4 638 aa10.78□□□□□ -0.68
USP6-204ENST00000572949 RASA3Q14644 834 aa10.77□□□□□ -0.68
USP6-204ENST00000572949 HOOK2Q96ED9 719 aa10.77□□□□□ -0.68
USP6-204ENST00000572949 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.77□□□□□ -0.68
USP6-204ENST00000572949 V9GYY5 206 aaPredicted RBP10.77□□□□□ -0.68
USP6-204ENST00000572949 NCOA7Q8NI08 942 aa10.77□□□□□ -0.68
USP6-204ENST00000572949 PRKAG2Q9UGJ0 569 aa10.77□□□□□ -0.68
USP6-204ENST00000572949 KIF21BO75037 1637 aa10.77□□□□□ -0.68
USP6-204ENST00000572949 C9orf84Q5VXU9 1444 aa10.77□□□□□ -0.69
USP6-204ENST00000572949 SNRPA1P09661 255 aaKnown RBP10.77□□□□□ -0.69
USP6-204ENST00000572949 ZBTB16Q05516 673 aa10.77□□□□□ -0.69
USP6-204ENST00000572949 RAB3GAP1Q15042 981 aa10.77□□□□□ -0.69
USP6-204ENST00000572949 KRT23Q9C075 422 aa10.77□□□□□ -0.69
USP6-204ENST00000572949 JADE2Q9NQC1 790 aa10.77□□□□□ -0.69
USP6-204ENST00000572949 RBM17Q96I25 401 aaKnown RBP10.77□□□□□ -0.69
USP6-204ENST00000572949 MAATS1Q7Z4T9 603 aa10.77□□□□□ -0.69
USP6-204ENST00000572949 ANKRD24Q8TF21 1146 aa10.77□□□□□ -0.69
USP6-204ENST00000572949 USP16Q9Y5T5 823 aa10.77□□□□□ -0.69
USP6-204ENST00000572949 TMEM110-MUSTN1A8MSY1 372 aa10.77□□□□□ -0.69
USP6-204ENST00000572949 DPY19L2Q6NUT2 758 aa10.77□□□□□ -0.69
USP6-204ENST00000572949 SMCR8Q8TEV9 937 aaPredicted RBP10.77□□□□□ -0.69
USP6-204ENST00000572949 ESR2Q92731 530 aa10.77□□□□□ -0.69
USP6-204ENST00000572949 KIFC2Q96AC6 838 aa10.77□□□□□ -0.69
USP6-204ENST00000572949 CCDC114Q96M63 670 aa10.77□□□□□ -0.69
USP6-204ENST00000572949 PANK2Q9BZ23 570 aa10.77□□□□□ -0.69
USP6-204ENST00000572949 RMND1Q9NWS8 449 aa10.77□□□□□ -0.69
USP6-204ENST00000572949 HFM1A2PYH4 1435 aa10.77□□□□□ -0.69
USP6-204ENST00000572949 ARHGEF6Q15052 776 aa10.77□□□□□ -0.69
USP6-204ENST00000572949 SCAND2PQ9GZW5 306 aaPredicted RBP10.77□□□□□ -0.69
USP6-204ENST00000572949 MKRN1Q9UHC7 482 aaKnown RBP10.77□□□□□ -0.69
USP6-204ENST00000572949 SLC4A4Q9Y6R1 1079 aa10.77□□□□□ -0.69
USP6-204ENST00000572949 ATAD2BQ9ULI0 1458 aa10.76□□□□□ -0.69
USP6-204ENST00000572949 CKAP4Q07065 602 aaKnown RBP10.76□□□□□ -0.69
USP6-204ENST00000572949 PRPHP41219 470 aa10.76□□□□□ -0.69
USP6-204ENST00000572949 GTPBP4Q9BZE4 634 aaKnown RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms