RNA–Protein interactions for RNA: ENST00000572351.1

NPLOC4-208, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-208ENST00000572351 DDX46Q7L014 1031 aaKnown RBP11.81□□□□□ -0.52
NPLOC4-208ENST00000572351 ZNF622Q969S3 477 aaKnown RBP eCLIP11.81□□□□□ -0.523e-11■□□□□ 11.1
NPLOC4-208ENST00000572351 RBM17Q96I25 401 aaKnown RBP11.81□□□□□ -0.52
NPLOC4-208ENST00000572351 RIC1Q4ADV7 1423 aa11.8□□□□□ -0.52
NPLOC4-208ENST00000572351 NPR1P16066 1061 aa11.8□□□□□ -0.52
NPLOC4-208ENST00000572351 DPEP1P16444 411 aa11.8□□□□□ -0.52
NPLOC4-208ENST00000572351 FOXO4P98177 505 aa11.8□□□□□ -0.52
NPLOC4-208ENST00000572351 SF3B3Q15393 1217 aaKnown RBP11.8□□□□□ -0.52
NPLOC4-208ENST00000572351 FAM161AQ3B820 660 aa11.8□□□□□ -0.52
NPLOC4-208ENST00000572351 TAF7LQ5H9L4 462 aa11.8□□□□□ -0.52
NPLOC4-208ENST00000572351 EPHA10Q5JZY3 1008 aa11.8□□□□□ -0.52
NPLOC4-208ENST00000572351 TTLL11Q8NHH1 800 aa11.8□□□□□ -0.52
NPLOC4-208ENST00000572351 EXOC6Q8TAG9 804 aa11.8□□□□□ -0.52
NPLOC4-208ENST00000572351 MASTLQ96GX5 879 aa11.8□□□□□ -0.52
NPLOC4-208ENST00000572351 GREM2Q9H772 168 aa11.8□□□□□ -0.52
NPLOC4-208ENST00000572351 ZBTB40Q9NUA8 1239 aa11.8□□□□□ -0.52
NPLOC4-208ENST00000572351 COL24A1Q17RW2 1714 aa11.8□□□□□ -0.52
NPLOC4-208ENST00000572351 A0A0G2JLW4 131 aa11.79□□□□□ -0.52
NPLOC4-208ENST00000572351 ANKRD18BA2A2Z9 1011 aa11.79□□□□□ -0.52
NPLOC4-208ENST00000572351 KLRG2A4D1S0 409 aaPredicted RBP11.79□□□□□ -0.52
NPLOC4-208ENST00000572351 SRGNP10124 158 aa11.79□□□□□ -0.52
NPLOC4-208ENST00000572351 IFIT5Q13325 482 aaKnown RBP11.79□□□□□ -0.52
NPLOC4-208ENST00000572351 CCDC57Q2TAC2 916 aa11.79□□□□□ -0.52
NPLOC4-208ENST00000572351 CRY2Q49AN0 593 aa11.79□□□□□ -0.52
NPLOC4-208ENST00000572351 KAZALD1Q96I82 304 aa11.79□□□□□ -0.52
NPLOC4-208ENST00000572351 NUP98P52948 1817 aa11.79□□□□□ -0.52
NPLOC4-208ENST00000572351 CACNA1FO60840 1977 aa11.78□□□□□ -0.52
NPLOC4-208ENST00000572351 ANKRD36CQ5JPF3 1778 aa11.78□□□□□ -0.52
NPLOC4-208ENST00000572351 SRGAP3O43295 1099 aa11.78□□□□□ -0.52
NPLOC4-208ENST00000572351 CSF1RP07333 972 aa11.78□□□□□ -0.52
NPLOC4-208ENST00000572351 ITGA6P23229 1130 aa11.78□□□□□ -0.52
NPLOC4-208ENST00000572351 ALDH1B1P30837 517 aa11.78□□□□□ -0.52
NPLOC4-208ENST00000572351 RABL6Q3YEC7 729 aaPredicted RBP11.78□□□□□ -0.52
NPLOC4-208ENST00000572351 STYK1Q6J9G0 422 aa11.78□□□□□ -0.52
NPLOC4-208ENST00000572351 ANKRD44Q8N8A2 993 aa11.78□□□□□ -0.52
NPLOC4-208ENST00000572351 NLGN2Q8NFZ4 835 aa11.78□□□□□ -0.52
NPLOC4-208ENST00000572351 CNKSR1Q969H4 720 aa11.78□□□□□ -0.52
NPLOC4-208ENST00000572351 CDC5LQ99459 802 aaKnown RBP11.78□□□□□ -0.52
NPLOC4-208ENST00000572351 SYT17Q9BSW7 474 aa11.78□□□□□ -0.52
NPLOC4-208ENST00000572351 TMX4Q9H1E5 349 aaPredicted RBP11.78□□□□□ -0.52
NPLOC4-208ENST00000572351 WWC3Q9ULE0 1092 aa11.78□□□□□ -0.52
NPLOC4-208ENST00000572351 HMMRO75330 724 aa11.77□□□□□ -0.53
NPLOC4-208ENST00000572351 HOXA10P31260 410 aaPredicted RBP11.77□□□□□ -0.53
NPLOC4-208ENST00000572351 IGHMBP2P38935 993 aaKnown RBP11.77□□□□□ -0.53
NPLOC4-208ENST00000572351 GRAPQ13588 217 aa11.77□□□□□ -0.53
NPLOC4-208ENST00000572351 AAMPQ13685 434 aa11.77□□□□□ -0.53
NPLOC4-208ENST00000572351 ANKRD18AQ8IVF6 992 aa11.77□□□□□ -0.53
NPLOC4-208ENST00000572351 GRAPLQ8TC17 118 aaPredicted RBP11.77□□□□□ -0.53
NPLOC4-208ENST00000572351 MPHOSPH8Q99549 860 aa11.77□□□□□ -0.53
NPLOC4-208ENST00000572351 PIM2Q9P1W9 311 aa11.77□□□□□ -0.53
NPLOC4-208ENST00000572351 PPEF1O14829 653 aaPredicted RBP11.76□□□□□ -0.53
NPLOC4-208ENST00000572351 DALRD3Q5D0E6 543 aaKnown RBP11.76□□□□□ -0.53
NPLOC4-208ENST00000572351 CEP85Q6P2H3 762 aa11.76□□□□□ -0.53
NPLOC4-208ENST00000572351 SAMD1Q6SPF0 538 aaPredicted RBP11.76□□□□□ -0.53
NPLOC4-208ENST00000572351 RPAP2Q8IXW5 612 aaPredicted RBP11.76□□□□□ -0.53
NPLOC4-208ENST00000572351 TTLL6Q8N841 843 aa11.76□□□□□ -0.53
NPLOC4-208ENST00000572351 CRAMP1Q96RY5 1269 aa11.76□□□□□ -0.53
NPLOC4-208ENST00000572351 SEC31BQ9NQW1 1179 aa11.76□□□□□ -0.53
NPLOC4-208ENST00000572351 RTL9Q8NET4 1388 aa11.76□□□□□ -0.53
NPLOC4-208ENST00000572351 BBOX1O75936 387 aa11.75□□□□□ -0.53
NPLOC4-208ENST00000572351 RPS8P62241 208 aaKnown RBP11.75□□□□□ -0.53
NPLOC4-208ENST00000572351 ATP8B2P98198 1209 aa11.75□□□□□ -0.53
NPLOC4-208ENST00000572351 MTX1Q13505 466 aa11.75□□□□□ -0.53
NPLOC4-208ENST00000572351 PRPF40BQ6NWY9 871 aaKnown RBP11.75□□□□□ -0.53
NPLOC4-208ENST00000572351 PELP1Q8IZL8 1130 aaKnown RBP11.75□□□□□ -0.53
NPLOC4-208ENST00000572351 CELF1Q92879 486 aaKnown RBP11.75□□□□□ -0.53
NPLOC4-208ENST00000572351 CNNM1Q9NRU3 951 aa11.75□□□□□ -0.53
NPLOC4-208ENST00000572351 BCS1LQ9Y276 419 aa11.75□□□□□ -0.53
NPLOC4-208ENST00000572351 NRXN2Q9P2S2 1712 aa11.74□□□□□ -0.53
NPLOC4-208ENST00000572351 PNMA6EA0A0J9YXQ4 647 aa11.74□□□□□ -0.53
NPLOC4-208ENST00000572351 ATXN8OSP0DMR3 200 aa11.74□□□□□ -0.53
NPLOC4-208ENST00000572351 OS9Q13438 667 aaPredicted RBP11.74□□□□□ -0.53
NPLOC4-208ENST00000572351 TMC4Q7Z404 712 aa11.74□□□□□ -0.53
NPLOC4-208ENST00000572351 KLHDC4Q8TBB5 520 aa11.74□□□□□ -0.53
NPLOC4-208ENST00000572351 ZNF594Q96JF6 807 aaPredicted RBP11.74□□□□□ -0.53
NPLOC4-208ENST00000572351 ZNF219Q9P2Y4 722 aaPredicted RBP11.74□□□□□ -0.53
NPLOC4-208ENST00000572351 AFDNP55196 1824 aaKnown RBP11.74□□□□□ -0.53
NPLOC4-208ENST00000572351 KCNA3P22001 575 aa11.73□□□□□ -0.53
NPLOC4-208ENST00000572351 LDHAL6AQ6ZMR3 332 aa11.73□□□□□ -0.53
NPLOC4-208ENST00000572351 SIL1Q9H173 461 aa11.73□□□□□ -0.53
NPLOC4-208ENST00000572351 TNRC6CQ9HCJ0 1690 aaKnown RBP11.73□□□□□ -0.53
NPLOC4-208ENST00000572351 PCDHB15Q9Y5E8 787 aa11.73□□□□□ -0.53
NPLOC4-208ENST00000572351 LRP5O75197 1615 aa11.72□□□□□ -0.53
NPLOC4-208ENST00000572351 SURF6O75683 361 aaKnown RBP11.72□□□□□ -0.53
NPLOC4-208ENST00000572351 G3BP1Q13283 466 aaKnown RBP eCLIP11.72□□□□□ -0.53
NPLOC4-208ENST00000572351 POLA2Q14181 598 aa11.72□□□□□ -0.53
NPLOC4-208ENST00000572351 SSH3Q8TE77 659 aa11.72□□□□□ -0.53
NPLOC4-208ENST00000572351 COPRSQ9NQ92 184 aa11.72□□□□□ -0.53
NPLOC4-208ENST00000572351 BSDC1Q9NW68 430 aaPredicted RBP11.72□□□□□ -0.53
NPLOC4-208ENST00000572351 PA2G4Q9UQ80 394 aaKnown RBP11.72□□□□□ -0.53
NPLOC4-208ENST00000572351 N4BP2Q86UW6 1770 aaPredicted RBP11.72□□□□□ -0.53
NPLOC4-208ENST00000572351 EYA2O00167 538 aa11.71□□□□□ -0.53
NPLOC4-208ENST00000572351 C21orf2O43822 256 aa11.71□□□□□ -0.53
NPLOC4-208ENST00000572351 RFX5P48382 616 aaPredicted RBP11.71□□□□□ -0.53
NPLOC4-208ENST00000572351 PTPN12Q05209 780 aaKnown RBP11.71□□□□□ -0.53
NPLOC4-208ENST00000572351 METTL24Q5JXM2 366 aa11.71□□□□□ -0.53
NPLOC4-208ENST00000572351 SOGA3Q5TF21 947 aa11.71□□□□□ -0.53
NPLOC4-208ENST00000572351 ANKIB1Q9P2G1 1089 aa11.71□□□□□ -0.53
NPLOC4-208ENST00000572351 ATP6V0A2Q9Y487 856 aa11.71□□□□□ -0.53
NPLOC4-208ENST00000572351 IL15P40933 162 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms