RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 SAGE1Q9NXZ1 904 aa15.03■□□□□ -0
CHMP6-202ENST00000571457 ERBB4Q15303 1308 aa15.02■□□□□ -0
CHMP6-202ENST00000571457 HIRAP54198 1017 aaPredicted RBP15.02■□□□□ -0
CHMP6-202ENST00000571457 SLC10A5Q5PT55 438 aa15.02■□□□□ -0
CHMP6-202ENST00000571457 C3orf67Q6ZVT6 689 aa15.02■□□□□ -0
CHMP6-202ENST00000571457 SLC51AQ86UW1 340 aa15.02■□□□□ -0
CHMP6-202ENST00000571457 SP8Q8IXZ3 490 aa15.02■□□□□ -0
CHMP6-202ENST00000571457 UTP14AQ9BVJ6 771 aaKnown RBP15.02■□□□□ -0
CHMP6-202ENST00000571457 CNOT7Q9UIV1 285 aaKnown RBP15.02■□□□□ -0
CHMP6-202ENST00000571457 ABCC4O15439 1325 aa15.01□□□□□ -0.01
CHMP6-202ENST00000571457 RAD17O75943 681 aa15.01□□□□□ -0.01
CHMP6-202ENST00000571457 RGMBQ6NW40 437 aa15.01□□□□□ -0.01
CHMP6-202ENST00000571457 USP48Q86UV5 1035 aa15.01□□□□□ -0.01
CHMP6-202ENST00000571457 TRPM4Q8TD43 1214 aa15.01□□□□□ -0.01
CHMP6-202ENST00000571457 CCDC102AQ96A19 550 aa15.01□□□□□ -0.01
CHMP6-202ENST00000571457 EIF4A1P60842 406 aaKnown RBP15□□□□□ -0.01
CHMP6-202ENST00000571457 C2orf69Q8N8R5 385 aa15□□□□□ -0.01
CHMP6-202ENST00000571457 ZIC5Q96T25 663 aa15□□□□□ -0.01
CHMP6-202ENST00000571457 DDX46Q7L014 1031 aaKnown RBP14.99□□□□□ -0.01
CHMP6-202ENST00000571457 KRT26Q7Z3Y9 468 aa14.99□□□□□ -0.01
CHMP6-202ENST00000571457 TMC4Q7Z404 712 aa14.99□□□□□ -0.01
CHMP6-202ENST00000571457 MICALL2Q8IY33 904 aa14.99□□□□□ -0.01
CHMP6-202ENST00000571457 DPF2Q92785 391 aa14.99□□□□□ -0.01
CHMP6-202ENST00000571457 PRPF38BQ5VTL8 546 aaKnown RBP14.98□□□□□ -0.01
CHMP6-202ENST00000571457 CCER1Q8TC90 406 aaPredicted RBP14.98□□□□□ -0.01
CHMP6-202ENST00000571457 GBA2Q9HCG7 927 aaPredicted RBP14.98□□□□□ -0.01
CHMP6-202ENST00000571457 KDM3BQ7LBC6 1761 aa14.98□□□□□ -0.01
CHMP6-202ENST00000571457 FAM155AB1AL88 458 aaPredicted RBP14.97□□□□□ -0.01
CHMP6-202ENST00000571457 ZNF157P51786 506 aaPredicted RBP14.97□□□□□ -0.01
CHMP6-202ENST00000571457 SOX10P56693 466 aa14.97□□□□□ -0.01
CHMP6-202ENST00000571457 KIF23Q02241 960 aaPredicted RBP14.97□□□□□ -0.01
CHMP6-202ENST00000571457 GRAPQ13588 217 aa14.97□□□□□ -0.01
CHMP6-202ENST00000571457 HSP90AB3PQ58FF7 597 aa14.97□□□□□ -0.01
CHMP6-202ENST00000571457 GRAPLQ8TC17 118 aaPredicted RBP14.97□□□□□ -0.01
CHMP6-202ENST00000571457 DCPSQ96C86 337 aaKnown RBP14.97□□□□□ -0.01
CHMP6-202ENST00000571457 TRPA1O75762 1119 aa14.96□□□□□ -0.01
CHMP6-202ENST00000571457 PPP2R1AP30153 589 aa14.96□□□□□ -0.01
CHMP6-202ENST00000571457 REM2Q8IYK8 340 aaPredicted RBP14.96□□□□□ -0.01
CHMP6-202ENST00000571457 SHTN1A0MZ66 631 aa14.95□□□□□ -0.02
CHMP6-202ENST00000571457 YDJCA8MPS7 323 aa14.95□□□□□ -0.02
CHMP6-202ENST00000571457 HCLS1P14317 486 aaPredicted RBP14.95□□□□□ -0.02
CHMP6-202ENST00000571457 RPS12P25398 132 aaKnown RBP14.95□□□□□ -0.02
CHMP6-202ENST00000571457 WASHC4Q2M389 1173 aa14.95□□□□□ -0.02
CHMP6-202ENST00000571457 SAMD7Q7Z3H4 446 aa14.95□□□□□ -0.02
CHMP6-202ENST00000571457 CTU1Q7Z7A3 348 aaKnown RBP14.95□□□□□ -0.02
CHMP6-202ENST00000571457 RNF186Q9NXI6 227 aa14.95□□□□□ -0.02
CHMP6-202ENST00000571457 AKAP11Q9UKA4 1901 aa14.95□□□□□ -0.02
CHMP6-202ENST00000571457 ANKRD36CQ5JPF3 1778 aa14.94□□□□□ -0.02
CHMP6-202ENST00000571457 TBC1D10BQ4KMP7 808 aaPredicted RBP14.94□□□□□ -0.02
CHMP6-202ENST00000571457 ZBTB12Q9Y330 459 aaPredicted RBP14.94□□□□□ -0.02
CHMP6-202ENST00000571457 SH3TC1Q8TE82 1336 aa14.93□□□□□ -0.02
CHMP6-202ENST00000571457 PSMD14O00487 310 aa14.93□□□□□ -0.02
CHMP6-202ENST00000571457 NLRP10Q86W26 655 aa14.93□□□□□ -0.02
CHMP6-202ENST00000571457 SULF1Q8IWU6 871 aa14.93□□□□□ -0.02
CHMP6-202ENST00000571457 TRMT112Q9UI30 125 aaKnown RBP14.93□□□□□ -0.02
CHMP6-202ENST00000571457 POLR2AP24928 1970 aaKnown RBP14.93□□□□□ -0.02
CHMP6-202ENST00000571457 DLG5Q8TDM6 1919 aa14.92□□□□□ -0.02
CHMP6-202ENST00000571457 SLC10A3P09131 477 aa14.92□□□□□ -0.02
CHMP6-202ENST00000571457 PDIA6Q15084 440 aa14.92□□□□□ -0.02
CHMP6-202ENST00000571457 NFE2L2Q16236 605 aa14.92□□□□□ -0.02
CHMP6-202ENST00000571457 PKN2Q16513 984 aaKnown RBP14.92□□□□□ -0.02
CHMP6-202ENST00000571457 DLK2Q6UY11 383 aa14.92□□□□□ -0.02
CHMP6-202ENST00000571457 LRP10Q7Z4F1 713 aa14.92□□□□□ -0.02
CHMP6-202ENST00000571457 CSRNP1Q96S65 589 aa14.92□□□□□ -0.02
CHMP6-202ENST00000571457 THUMPD2Q9BTF0 503 aaKnown RBP14.92□□□□□ -0.02
CHMP6-202ENST00000571457 PNNQ9H307 717 aaKnown RBP14.92□□□□□ -0.02
CHMP6-202ENST00000571457 LAMB2P55268 1798 aa14.91□□□□□ -0.02
CHMP6-202ENST00000571457 ADM5C9JUS6 153 aa14.91□□□□□ -0.02
CHMP6-202ENST00000571457 EIF2S2P20042 333 aaKnown RBP14.91□□□□□ -0.02
CHMP6-202ENST00000571457 RBM26Q5T8P6 1007 aaKnown RBP14.91□□□□□ -0.02
CHMP6-202ENST00000571457 EYA3Q99504 573 aa14.91□□□□□ -0.02
CHMP6-202ENST00000571457 DBNDD1Q9H9R9 158 aa14.91□□□□□ -0.02
CHMP6-202ENST00000571457 TSPYL4Q9UJ04 414 aa14.91□□□□□ -0.02
CHMP6-202ENST00000571457 NSFL1CQ9UNZ2 370 aaKnown RBP14.91□□□□□ -0.02
CHMP6-202ENST00000571457 DUOX1Q9NRD9 1551 aa14.9□□□□□ -0.02
CHMP6-202ENST00000571457 C6orf229H3BNL8 230 aa14.9□□□□□ -0.02
CHMP6-202ENST00000571457 EGFRP00533 1210 aa14.9□□□□□ -0.02
CHMP6-202ENST00000571457 TCIRG1Q13488 830 aa14.9□□□□□ -0.02
CHMP6-202ENST00000571457 RIMBP2O15034 1052 aa14.89□□□□□ -0.03
CHMP6-202ENST00000571457 ECE2O60344 883 aa14.89□□□□□ -0.03
CHMP6-202ENST00000571457 FKBP1BP68106 108 aa14.89□□□□□ -0.03
CHMP6-202ENST00000571457 KIF4BQ2VIQ3 1234 aa14.89□□□□□ -0.03
CHMP6-202ENST00000571457 COPS6Q7L5N1 327 aa14.89□□□□□ -0.03
CHMP6-202ENST00000571457 GGA3Q9NZ52 723 aa14.89□□□□□ -0.03
CHMP6-202ENST00000571457 HDAC9Q9UKV0 1011 aa14.89□□□□□ -0.03
CHMP6-202ENST00000571457 HPS5Q9UPZ3 1129 aa14.89□□□□□ -0.03
CHMP6-202ENST00000571457 MAPK8IP3Q9UPT6 1336 aa14.89□□□□□ -0.03
CHMP6-202ENST00000571457 LRRC37AA6NMS7 1700 aa14.89□□□□□ -0.03
CHMP6-202ENST00000571457 AIMP1Q12904 312 aaKnown RBP14.88□□□□□ -0.03
CHMP6-202ENST00000571457 PROSER3Q2NL68 480 aa14.88□□□□□ -0.03
CHMP6-202ENST00000571457 CDCA5Q96FF9 252 aa14.88□□□□□ -0.03
CHMP6-202ENST00000571457 PLEKHF1Q96S99 279 aa14.88□□□□□ -0.03
CHMP6-202ENST00000571457 BABAM1Q9NWV8 329 aa14.88□□□□□ -0.03
CHMP6-202ENST00000571457 ANXA1P04083 346 aa14.87□□□□□ -0.03
CHMP6-202ENST00000571457 VIL1P09327 827 aaKnown RBP14.87□□□□□ -0.03
CHMP6-202ENST00000571457 XAGE3Q8WTP9 111 aa14.87□□□□□ -0.03
CHMP6-202ENST00000571457 GCC1Q96CN9 775 aa14.87□□□□□ -0.03
CHMP6-202ENST00000571457 POLLQ9UGP5 575 aa14.87□□□□□ -0.03
CHMP6-202ENST00000571457 TAF1P21675 1872 aa14.86□□□□□ -0.03
CHMP6-202ENST00000571457 RTL9Q8NET4 1388 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms