RNA–Protein interactions for RNA: ENST00000571022.5

ABR-209, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-209ENST00000571022 NBPF5PQ86XG9 351 aaPredicted RBP6.33□□□□□ -1.4
ABR-209ENST00000571022 CNBD1Q8NA66 436 aa6.33□□□□□ -1.4
ABR-209ENST00000571022 SLC16A10Q8TF71 515 aa6.33□□□□□ -1.4
ABR-209ENST00000571022 ZNF594Q96JF6 807 aaPredicted RBP6.33□□□□□ -1.4
ABR-209ENST00000571022 PUS3Q9BZE2 481 aaKnown RBP6.33□□□□□ -1.4
ABR-209ENST00000571022 MTFR1LQ9H019 292 aa6.33□□□□□ -1.4
ABR-209ENST00000571022 C9orf78Q9NZ63 289 aaPredicted RBP6.33□□□□□ -1.4
ABR-209ENST00000571022 KIF13BQ9NQT8 1826 aa6.33□□□□□ -1.4
ABR-209ENST00000571022 PDE8AO60658 829 aa6.32□□□□□ -1.4
ABR-209ENST00000571022 GNAI3P08754 354 aa6.32□□□□□ -1.4
ABR-209ENST00000571022 KCNA3P22001 575 aa6.32□□□□□ -1.4
ABR-209ENST00000571022 CHRNA5P30532 468 aa6.32□□□□□ -1.4
ABR-209ENST00000571022 SF3B3Q15393 1217 aaKnown RBP6.32□□□□□ -1.4
ABR-209ENST00000571022 OLFM4Q6UX06 510 aa6.32□□□□□ -1.4
ABR-209ENST00000571022 ATG9AQ7Z3C6 839 aa6.32□□□□□ -1.4
ABR-209ENST00000571022 NPM2Q86SE8 214 aaKnown RBP6.32□□□□□ -1.4
ABR-209ENST00000571022 SSH3Q8TE77 659 aa6.32□□□□□ -1.4
ABR-209ENST00000571022 CELF1Q92879 486 aaKnown RBP6.32□□□□□ -1.4
ABR-209ENST00000571022 SNED1Q8TER0 1413 aa6.32□□□□□ -1.4
ABR-209ENST00000571022 RTL9Q8NET4 1388 aa6.31□□□□□ -1.4
ABR-209ENST00000571022 MYH3P11055 1940 aa6.31□□□□□ -1.4
ABR-209ENST00000571022 SNAP23O00161 211 aa6.31□□□□□ -1.4
ABR-209ENST00000571022 SASH1O94885 1247 aa6.31□□□□□ -1.4
ABR-209ENST00000571022 HDAC1Q13547 482 aaPredicted RBP6.31□□□□□ -1.4
ABR-209ENST00000571022 LRRC24Q50LG9 513 aa6.31□□□□□ -1.4
ABR-209ENST00000571022 TPTE2Q6XPS3 522 aa6.31□□□□□ -1.4
ABR-209ENST00000571022 NLGN2Q8NFZ4 835 aa6.31□□□□□ -1.4
ABR-209ENST00000571022 PARP3Q9Y6F1 533 aa6.31□□□□□ -1.4
ABR-209ENST00000571022 SRGAP3O43295 1099 aa6.3□□□□□ -1.4
ABR-209ENST00000571022 SRGNP10124 158 aa6.3□□□□□ -1.4
ABR-209ENST00000571022 DPEP1P16444 411 aa6.3□□□□□ -1.4
ABR-209ENST00000571022 ITGA6P23229 1130 aa6.3□□□□□ -1.4
ABR-209ENST00000571022 HOXA10P31260 410 aaPredicted RBP6.3□□□□□ -1.4
ABR-209ENST00000571022 RPAP2Q8IXW5 612 aaPredicted RBP6.3□□□□□ -1.4
ABR-209ENST00000571022 SMC5Q8IY18 1101 aa6.3□□□□□ -1.4
ABR-209ENST00000571022 OTUD7AQ8TE49 926 aaPredicted RBP6.3□□□□□ -1.4
ABR-209ENST00000571022 BRIP1Q9BX63 1249 aa6.3□□□□□ -1.4
ABR-209ENST00000571022 NYXQ9GZU5 481 aa6.3□□□□□ -1.4
ABR-209ENST00000571022 COPRSQ9NQ92 184 aa6.3□□□□□ -1.4
ABR-209ENST00000571022 EXOC6BQ9Y2D4 811 aa6.3□□□□□ -1.4
ABR-209ENST00000571022 NOP58Q9Y2X3 529 aaKnown RBP6.3□□□□□ -1.4
ABR-209ENST00000571022 A0A1B0GUL6 1792 aa6.3□□□□□ -1.4
ABR-209ENST00000571022 DLEC1Q9Y238 1755 aa6.3□□□□□ -1.4
ABR-209ENST00000571022 DUOX1Q9NRD9 1551 aa6.3□□□□□ -1.4
ABR-209ENST00000571022 SLX4Q8IY92 1834 aa6.29□□□□□ -1.4
ABR-209ENST00000571022 SPEF2Q9C093 1822 aa6.29□□□□□ -1.4
ABR-209ENST00000571022 GOLGB1Q14789 3259 aaKnown RBP6.29□□□□□ -1.4
ABR-209ENST00000571022 A0A0G2JLW4 131 aa6.29□□□□□ -1.4
ABR-209ENST00000571022 LRRC37AA6NMS7 1700 aa6.29□□□□□ -1.4
ABR-209ENST00000571022 SMARCA5O60264 1052 aaPredicted RBP6.29□□□□□ -1.4
ABR-209ENST00000571022 NEFLP07196 543 aa6.29□□□□□ -1.4
ABR-209ENST00000571022 HMGB2P26583 209 aaKnown RBP6.29□□□□□ -1.4
ABR-209ENST00000571022 KLRK1P26718 216 aa6.29□□□□□ -1.4
ABR-209ENST00000571022 PDE4AP27815 886 aa6.29□□□□□ -1.4
ABR-209ENST00000571022 BRCA1P38398 1863 aaKnown RBP6.29□□□□□ -1.4
ABR-209ENST00000571022 LTBP1Q14766 1721 aa6.29□□□□□ -1.4
ABR-209ENST00000571022 VGLL2Q8N8G2 317 aa6.29□□□□□ -1.4
ABR-209ENST00000571022 C7orf43Q8WVR3 580 aa6.29□□□□□ -1.4
ABR-209ENST00000571022 SIL1Q9H173 461 aa6.29□□□□□ -1.4
ABR-209ENST00000571022 DCTPP1Q9H773 170 aa6.29□□□□□ -1.4
ABR-209ENST00000571022 PPP4R2Q9NY27 417 aa6.29□□□□□ -1.4
ABR-209ENST00000571022 WWC3Q9ULE0 1092 aa6.29□□□□□ -1.4
ABR-209ENST00000571022 RIPOR2Q9Y4F9 1068 aa6.29□□□□□ -1.4
ABR-209ENST00000571022 SALL3Q9BXA9 1300 aa6.28□□□□□ -1.4
ABR-209ENST00000571022 IRS2Q9Y4H2 1338 aa6.28□□□□□ -1.4
ABR-209ENST00000571022 EYA2O00167 538 aa6.28□□□□□ -1.4
ABR-209ENST00000571022 GTF2E1P29083 439 aaPredicted RBP6.28□□□□□ -1.4
ABR-209ENST00000571022 ST5P78524 1137 aa6.28□□□□□ -1.4
ABR-209ENST00000571022 GRAPQ13588 217 aa6.28□□□□□ -1.4
ABR-209ENST00000571022 C2CD5Q86YS7 1000 aa6.28□□□□□ -1.4
ABR-209ENST00000571022 C16orf71Q8IYS4 520 aaPredicted RBP6.28□□□□□ -1.4
ABR-209ENST00000571022 HELBQ8NG08 1087 aaPredicted RBP6.28□□□□□ -1.4
ABR-209ENST00000571022 GRAPLQ8TC17 118 aaPredicted RBP6.28□□□□□ -1.4
ABR-209ENST00000571022 NLRP3Q96P20 1036 aa6.28□□□□□ -1.4
ABR-209ENST00000571022 GPR101Q96P66 508 aaPredicted RBP6.28□□□□□ -1.4
ABR-209ENST00000571022 FHDC1Q9C0D6 1143 aaPredicted RBP6.28□□□□□ -1.4
ABR-209ENST00000571022 SPON1Q9HCB6 807 aa6.28□□□□□ -1.4
ABR-209ENST00000571022 TLR7Q9NYK1 1049 aaKnown RBP6.28□□□□□ -1.4
ABR-209ENST00000571022 CHMP3Q9Y3E7 222 aa6.28□□□□□ -1.4
ABR-209ENST00000571022 COL4A5P29400 1685 aa6.27□□□□□ -1.41
ABR-209ENST00000571022 ANKRD18BA2A2Z9 1011 aa6.27□□□□□ -1.41
ABR-209ENST00000571022 APBB1O00213 710 aa6.27□□□□□ -1.41
ABR-209ENST00000571022 SURF6O75683 361 aaKnown RBP6.27□□□□□ -1.41
ABR-209ENST00000571022 FGFR2P21802 821 aa6.27□□□□□ -1.41
ABR-209ENST00000571022 PRELPP51888 382 aa6.27□□□□□ -1.41
ABR-209ENST00000571022 TFCP2Q12800 502 aa6.27□□□□□ -1.41
ABR-209ENST00000571022 IFIT5Q13325 482 aaKnown RBP6.27□□□□□ -1.41
ABR-209ENST00000571022 AAMPQ13685 434 aa6.27□□□□□ -1.41
ABR-209ENST00000571022 CCDC152Q4G0S7 254 aa6.27□□□□□ -1.41
ABR-209ENST00000571022 ERICH6BQ5W0A0 696 aa6.27□□□□□ -1.41
ABR-209ENST00000571022 TXNRD3Q86VQ6 643 aa6.27□□□□□ -1.41
ABR-209ENST00000571022 EAF2Q96CJ1 260 aaPredicted RBP6.27□□□□□ -1.41
ABR-209ENST00000571022 CRAMP1Q96RY5 1269 aa6.27□□□□□ -1.41
ABR-209ENST00000571022 IL1RAPL2Q9NP60 686 aa6.27□□□□□ -1.41
ABR-209ENST00000571022 MINPP1Q9UNW1 487 aa6.27□□□□□ -1.41
ABR-209ENST00000571022 PDZRN3Q9UPQ7 1066 aa6.27□□□□□ -1.41
ABR-209ENST00000571022 CACNA1SQ13698 1873 aa6.27□□□□□ -1.41
ABR-209ENST00000571022 ZNF609O15014 1411 aa6.26□□□□□ -1.41
ABR-209ENST00000571022 TAF5LO75529 589 aa6.26□□□□□ -1.41
ABR-209ENST00000571022 NPR1P16066 1061 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms