RNA–Protein interactions for RNA: ENST00000570856.1

GABARAP-202, Transcript of GABA type A receptor-associated protein, humanhuman

TSL 2

Gene GABARAP, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAP-202ENST00000570856 HCLS1P14317 486 aaPredicted RBP16.82■□□□□ 0.28
GABARAP-202ENST00000570856 FAM177BA6PVY3 158 aa16.81■□□□□ 0.28
GABARAP-202ENST00000570856 PTPN12Q05209 780 aaKnown RBP16.81■□□□□ 0.28
GABARAP-202ENST00000570856 CNBD1Q8NA66 436 aa16.81■□□□□ 0.28
GABARAP-202ENST00000570856 PDGFDQ9GZP0 370 aaPredicted RBP16.81■□□□□ 0.28
GABARAP-202ENST00000570856 FBXO3Q9UK99 471 aa16.81■□□□□ 0.28
GABARAP-202ENST00000570856 MMP10P09238 476 aa16.8■□□□□ 0.28
GABARAP-202ENST00000570856 LRP5O75197 1615 aa16.8■□□□□ 0.28
GABARAP-202ENST00000570856 KIF13BQ9NQT8 1826 aa16.8■□□□□ 0.28
GABARAP-202ENST00000570856 GTF2E1P29083 439 aaPredicted RBP16.79■□□□□ 0.28
GABARAP-202ENST00000570856 NLRP3Q96P20 1036 aa16.79■□□□□ 0.28
GABARAP-202ENST00000570856 RAB11FIP3O75154 756 aa16.78■□□□□ 0.28
GABARAP-202ENST00000570856 NUCB1Q02818 461 aa16.78■□□□□ 0.28
GABARAP-202ENST00000570856 FAM161AQ3B820 660 aa16.78■□□□□ 0.28
GABARAP-202ENST00000570856 CRY2Q49AN0 593 aa16.78■□□□□ 0.28
GABARAP-202ENST00000570856 CCDC152Q4G0S7 254 aa16.78■□□□□ 0.28
GABARAP-202ENST00000570856 HSP90AB4PQ58FF6 505 aa16.78■□□□□ 0.28
GABARAP-202ENST00000570856 C3orf67Q6ZVT6 689 aa16.78■□□□□ 0.28
GABARAP-202ENST00000570856 GREM2Q9H772 168 aa16.78■□□□□ 0.28
GABARAP-202ENST00000570856 PARP3Q9Y6F1 533 aa16.78■□□□□ 0.28
GABARAP-202ENST00000570856 SURF6O75683 361 aaKnown RBP16.77■□□□□ 0.28
GABARAP-202ENST00000570856 ST5P78524 1137 aa16.77■□□□□ 0.28
GABARAP-202ENST00000570856 CCDC57Q2TAC2 916 aa16.77■□□□□ 0.28
GABARAP-202ENST00000570856 BRIP1Q9BX63 1249 aa16.77■□□□□ 0.28
GABARAP-202ENST00000570856 TAF1P21675 1872 aa16.77■□□□□ 0.27
GABARAP-202ENST00000570856 CIAO1O76071 339 aa16.76■□□□□ 0.27
GABARAP-202ENST00000570856 ITGA6P23229 1130 aa16.76■□□□□ 0.27
GABARAP-202ENST00000570856 IFIT5Q13325 482 aaKnown RBP16.76■□□□□ 0.27
GABARAP-202ENST00000570856 R3HDM1Q15032 1099 aaKnown RBP16.76■□□□□ 0.27
GABARAP-202ENST00000570856 MTFR1LQ9H019 292 aa16.76■□□□□ 0.27
GABARAP-202ENST00000570856 PDZRN3Q9UPQ7 1066 aa16.76■□□□□ 0.27
GABARAP-202ENST00000570856 PA2G4Q9UQ80 394 aaKnown RBP16.76■□□□□ 0.27
GABARAP-202ENST00000570856 EXOC6BQ9Y2D4 811 aa16.76■□□□□ 0.27
GABARAP-202ENST00000570856 A0A1B0GUL6 1792 aa16.75■□□□□ 0.27
GABARAP-202ENST00000570856 ANKRD18BA2A2Z9 1011 aa16.75■□□□□ 0.27
GABARAP-202ENST00000570856 HOXA10P31260 410 aaPredicted RBP16.75■□□□□ 0.27
GABARAP-202ENST00000570856 MSL1Q68DK7 614 aa16.75■□□□□ 0.27
GABARAP-202ENST00000570856 ATG9AQ7Z3C6 839 aa16.75■□□□□ 0.27
GABARAP-202ENST00000570856 ERC1Q8IUD2 1116 aa16.75■□□□□ 0.27
GABARAP-202ENST00000570856 COL4A1P02462 1669 aa16.75■□□□□ 0.27
GABARAP-202ENST00000570856 SPEF2Q9C093 1822 aa16.75■□□□□ 0.27
GABARAP-202ENST00000570856 EYA2O00167 538 aa16.74■□□□□ 0.27
GABARAP-202ENST00000570856 SASH1O94885 1247 aa16.74■□□□□ 0.27
GABARAP-202ENST00000570856 CHD1LQ86WJ1 897 aa16.74■□□□□ 0.27
GABARAP-202ENST00000570856 KLHDC4Q8TBB5 520 aa16.74■□□□□ 0.27
GABARAP-202ENST00000570856 RHPN1Q8TCX5 695 aa16.74■□□□□ 0.27
GABARAP-202ENST00000570856 KIF1BPQ96EK5 621 aa16.74■□□□□ 0.27
GABARAP-202ENST00000570856 SGIP1Q9BQI5 828 aa16.74■□□□□ 0.27
GABARAP-202ENST00000570856 CHMP3Q9Y3E7 222 aa16.74■□□□□ 0.27
GABARAP-202ENST00000570856 COL11A2P13942 1736 aaPredicted RBP16.73■□□□□ 0.27
GABARAP-202ENST00000570856 C10orf71Q711Q0 1435 aa16.73■□□□□ 0.27
GABARAP-202ENST00000570856 G3BP1Q13283 466 aaKnown RBP eCLIP16.73■□□□□ 0.27
GABARAP-202ENST00000570856 LRRCC1Q9C099 1032 aa16.73■□□□□ 0.27
GABARAP-202ENST00000570856 DLEC1Q9Y238 1755 aa16.73■□□□□ 0.27
GABARAP-202ENST00000570856 IL15P40933 162 aaPredicted RBP16.72■□□□□ 0.27
GABARAP-202ENST00000570856 ANKRD45Q5TZF3 282 aa16.72■□□□□ 0.27
GABARAP-202ENST00000570856 CCDC24Q8N4L8 307 aa16.72■□□□□ 0.27
GABARAP-202ENST00000570856 ZNF594Q96JF6 807 aaPredicted RBP16.72■□□□□ 0.27
GABARAP-202ENST00000570856 CDC5LQ99459 802 aaKnown RBP16.72■□□□□ 0.27
GABARAP-202ENST00000570856 SEC31BQ9NQW1 1179 aa16.72■□□□□ 0.27
GABARAP-202ENST00000570856 RIPOR2Q9Y4F9 1068 aa16.72■□□□□ 0.27
GABARAP-202ENST00000570856 NPHP1O15259 732 aa16.71■□□□□ 0.27
GABARAP-202ENST00000570856 PDE6BP35913 854 aa16.71■□□□□ 0.27
GABARAP-202ENST00000570856 CCDC85AQ96PX6 553 aaPredicted RBP16.71■□□□□ 0.27
GABARAP-202ENST00000570856 CRAMP1Q96RY5 1269 aa16.71■□□□□ 0.27
GABARAP-202ENST00000570856 PUS3Q9BZE2 481 aaKnown RBP16.71■□□□□ 0.27
GABARAP-202ENST00000570856 GPR108Q9NPR9 543 aa16.71■□□□□ 0.27
GABARAP-202ENST00000570856 KIAA1551Q9HCM1 1747 aa16.7■□□□□ 0.26
GABARAP-202ENST00000570856 SRGNP10124 158 aa16.7■□□□□ 0.26
GABARAP-202ENST00000570856 LRRC24Q50LG9 513 aa16.7■□□□□ 0.26
GABARAP-202ENST00000570856 LDHAL6AQ6ZMR3 332 aa16.7■□□□□ 0.26
GABARAP-202ENST00000570856 BSDC1Q9NW68 430 aaPredicted RBP16.7■□□□□ 0.26
GABARAP-202ENST00000570856 SALL3Q9BXA9 1300 aa16.7■□□□□ 0.26
GABARAP-202ENST00000570856 ZBTB7AO95365 584 aa16.69■□□□□ 0.26
GABARAP-202ENST00000570856 PDE4AP27815 886 aa16.69■□□□□ 0.26
GABARAP-202ENST00000570856 RPS8P62241 208 aaKnown RBP16.69■□□□□ 0.26
GABARAP-202ENST00000570856 DDX46Q7L014 1031 aaKnown RBP16.69■□□□□ 0.26
GABARAP-202ENST00000570856 CELF1Q92879 486 aaKnown RBP16.69■□□□□ 0.26
GABARAP-202ENST00000570856 SIL1Q9H173 461 aa16.69■□□□□ 0.26
GABARAP-202ENST00000570856 LRRC37AA6NMS7 1700 aa16.69■□□□□ 0.26
GABARAP-202ENST00000570856 ARAP2Q8WZ64 1704 aa16.68■□□□□ 0.26
GABARAP-202ENST00000570856 IGHMBP2P38935 993 aaKnown RBP16.68■□□□□ 0.26
GABARAP-202ENST00000570856 GRAPQ13588 217 aa16.68■□□□□ 0.26
GABARAP-202ENST00000570856 TAF7LQ5H9L4 462 aa16.68■□□□□ 0.26
GABARAP-202ENST00000570856 ANKRD18AQ8IVF6 992 aa16.68■□□□□ 0.26
GABARAP-202ENST00000570856 VGLL2Q8N8G2 317 aa16.68■□□□□ 0.26
GABARAP-202ENST00000570856 GRAPLQ8TC17 118 aaPredicted RBP16.68■□□□□ 0.26
GABARAP-202ENST00000570856 RBM17Q96I25 401 aaKnown RBP16.68■□□□□ 0.26
GABARAP-202ENST00000570856 LNPKQ9C0E8 428 aa16.68■□□□□ 0.26
GABARAP-202ENST00000570856 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.68■□□□□ 0.26
GABARAP-202ENST00000570856 MROH5Q6ZUA9 1318 aa16.68■□□□□ 0.26
GABARAP-202ENST00000570856 PSDA5PKW4 1024 aaPredicted RBP16.67■□□□□ 0.26
GABARAP-202ENST00000570856 SMARCA5O60264 1052 aaPredicted RBP16.67■□□□□ 0.26
GABARAP-202ENST00000570856 BBOX1O75936 387 aa16.67■□□□□ 0.26
GABARAP-202ENST00000570856 NPR1P16066 1061 aa16.67■□□□□ 0.26
GABARAP-202ENST00000570856 POLD1P28340 1107 aa16.67■□□□□ 0.26
GABARAP-202ENST00000570856 PTGER2P43116 358 aa16.67■□□□□ 0.26
GABARAP-202ENST00000570856 OS9Q13438 667 aaPredicted RBP16.67■□□□□ 0.26
GABARAP-202ENST00000570856 RPGRQ92834 1020 aaKnown RBP16.67■□□□□ 0.26
GABARAP-202ENST00000570856 BRCA1P38398 1863 aaKnown RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms