RNA–Protein interactions for RNA: ENST00000570308.5

MMP2-208, Transcript of matrix metallopeptidase 2, humanhuman

TSL 1 (best) BASIC

Gene MMP2, Length 3,235 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2-208ENST00000570308 TRMT1Q9NXH9 659 aaKnown RBP12.26□□□□□ -0.45
MMP2-208ENST00000570308 CHL1O00533 1208 aa12.26□□□□□ -0.45
MMP2-208ENST00000570308 HMOX1P09601 288 aa12.26□□□□□ -0.45
MMP2-208ENST00000570308 SKILP12757 684 aa12.26□□□□□ -0.45
MMP2-208ENST00000570308 CASTP20810 708 aaKnown RBP12.26□□□□□ -0.45
MMP2-208ENST00000570308 TYRO3Q06418 890 aa12.26□□□□□ -0.45
MMP2-208ENST00000570308 SWT1Q5T5J6 900 aaKnown RBP12.26□□□□□ -0.45
MMP2-208ENST00000570308 ANKRD20A12PQ8NF67 263 aa12.26□□□□□ -0.45
MMP2-208ENST00000570308 ZCCHC17Q9NP64 241 aaKnown RBP12.26□□□□□ -0.45
MMP2-208ENST00000570308 CACNA1FO60840 1977 aa12.26□□□□□ -0.45
MMP2-208ENST00000570308 C1orf167Q5SNV9 1468 aa12.26□□□□□ -0.45
MMP2-208ENST00000570308 ZSCAN22P10073 491 aaPredicted RBP12.26□□□□□ -0.45
MMP2-208ENST00000570308 MAP2K2P36507 400 aa12.26□□□□□ -0.45
MMP2-208ENST00000570308 SMC1AQ14683 1233 aaKnown RBP12.26□□□□□ -0.45
MMP2-208ENST00000570308 GRIPAP1Q4V328 841 aa12.26□□□□□ -0.45
MMP2-208ENST00000570308 XIRP1Q702N8 1843 aaKnown RBP12.25□□□□□ -0.45
MMP2-208ENST00000570308 GSCP56915 257 aaPredicted RBP12.25□□□□□ -0.45
MMP2-208ENST00000570308 TSGA10IPQ3SY00 556 aa12.25□□□□□ -0.45
MMP2-208ENST00000570308 SIRT2Q8IXJ6 389 aa12.25□□□□□ -0.45
MMP2-208ENST00000570308 MRPL50Q8N5N7 158 aaKnown RBP12.25□□□□□ -0.45
MMP2-208ENST00000570308 MBIPQ9NS73 344 aa12.25□□□□□ -0.45
MMP2-208ENST00000570308 KDM3BQ7LBC6 1761 aa12.25□□□□□ -0.45
MMP2-208ENST00000570308 ABCC4O15439 1325 aa12.25□□□□□ -0.45
MMP2-208ENST00000570308 HOXC9P31274 260 aa12.25□□□□□ -0.45
MMP2-208ENST00000570308 HSP90AB2PQ58FF8 381 aa12.25□□□□□ -0.45
MMP2-208ENST00000570308 CBX8Q9HC52 389 aa12.25□□□□□ -0.45
MMP2-208ENST00000570308 L2HGDHQ9H9P8 463 aa12.24□□□□□ -0.45
MMP2-208ENST00000570308 MRVI1Q9Y6F6 885 aa12.24□□□□□ -0.45
MMP2-208ENST00000570308 EIF3CLB5ME19 914 aaKnown RBP12.24□□□□□ -0.45
MMP2-208ENST00000570308 TPM1P09493 284 aa12.24□□□□□ -0.45
MMP2-208ENST00000570308 SULT6B1Q6IMI4 303 aa12.24□□□□□ -0.45
MMP2-208ENST00000570308 CCAR2Q8N163 923 aaKnown RBP12.24□□□□□ -0.45
MMP2-208ENST00000570308 KCNH5Q8NCM2 988 aa12.24□□□□□ -0.45
MMP2-208ENST00000570308 EIF3CQ99613 913 aaKnown RBP12.24□□□□□ -0.45
MMP2-208ENST00000570308 NUP62CLQ9H1M0 184 aa12.24□□□□□ -0.45
MMP2-208ENST00000570308 CDC25BP30305 580 aa12.24□□□□□ -0.45
MMP2-208ENST00000570308 CCDC144BQ3MJ40 725 aa12.24□□□□□ -0.45
MMP2-208ENST00000570308 ANO6Q4KMQ2 910 aa12.24□□□□□ -0.45
MMP2-208ENST00000570308 CCDC144CPQ8IYA2 1237 aa12.24□□□□□ -0.45
MMP2-208ENST00000570308 SNW1Q13573 536 aaKnown RBP12.23□□□□□ -0.45
MMP2-208ENST00000570308 MMS22LQ6ZRQ5 1243 aa12.23□□□□□ -0.45
MMP2-208ENST00000570308 C16orf71Q8IYS4 520 aaPredicted RBP12.23□□□□□ -0.45
MMP2-208ENST00000570308 CNKSR2Q8WXI2 1034 aa12.23□□□□□ -0.45
MMP2-208ENST00000570308 CEP89Q96ST8 783 aa12.23□□□□□ -0.45
MMP2-208ENST00000570308 UBXN6Q9BZV1 441 aa12.23□□□□□ -0.45
MMP2-208ENST00000570308 ADAM21Q9UKJ8 722 aa12.23□□□□□ -0.45
MMP2-208ENST00000570308 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.23□□□□□ -0.45
MMP2-208ENST00000570308 GOLIM4O00461 696 aa12.23□□□□□ -0.45
MMP2-208ENST00000570308 COL18A1P39060 1754 aa12.23□□□□□ -0.45
MMP2-208ENST00000570308 ZRSR1Q15695 479 aaKnown RBP12.22□□□□□ -0.45
MMP2-208ENST00000570308 REXO1L1PQ8IX06 675 aa12.22□□□□□ -0.45
MMP2-208ENST00000570308 IP6K1Q92551 441 aa12.22□□□□□ -0.45
MMP2-208ENST00000570308 RGS12O14924 1447 aa12.22□□□□□ -0.45
MMP2-208ENST00000570308 CCDC196A0A1B0GTZ2 297 aa12.22□□□□□ -0.45
MMP2-208ENST00000570308 STX6O43752 255 aa12.22□□□□□ -0.45
MMP2-208ENST00000570308 ANAPC15P60006 121 aa12.22□□□□□ -0.45
MMP2-208ENST00000570308 TDRD7Q8NHU6 1098 aaKnown RBP12.22□□□□□ -0.45
MMP2-208ENST00000570308 ORC3Q9UBD5 711 aaPredicted RBP12.22□□□□□ -0.45
MMP2-208ENST00000570308 SIPA1L3O60292 1781 aaPredicted RBP12.22□□□□□ -0.45
MMP2-208ENST00000570308 F13A1P00488 732 aa12.22□□□□□ -0.45
MMP2-208ENST00000570308 DCTPP1Q9H773 170 aa12.22□□□□□ -0.45
MMP2-208ENST00000570308 SEC31AO94979 1220 aaKnown RBP12.21□□□□□ -0.45
MMP2-208ENST00000570308 NLRP6P59044 892 aa12.21□□□□□ -0.45
MMP2-208ENST00000570308 CCDC34Q96HJ3 373 aa12.21□□□□□ -0.45
MMP2-208ENST00000570308 EYA1Q99502 592 aa12.21□□□□□ -0.45
MMP2-208ENST00000570308 MSH6P52701 1360 aa12.21□□□□□ -0.45
MMP2-208ENST00000570308 STRCQ7RTU9 1775 aa12.21□□□□□ -0.45
MMP2-208ENST00000570308 CALRP27797 417 aaKnown RBP12.21□□□□□ -0.46
MMP2-208ENST00000570308 CAMK4Q16566 473 aa12.21□□□□□ -0.46
MMP2-208ENST00000570308 DNAJC21Q5F1R6 531 aaKnown RBP12.21□□□□□ -0.46
MMP2-208ENST00000570308 TNMDQ9H2S6 317 aa12.21□□□□□ -0.46
MMP2-208ENST00000570308 CCDC69A6NI79 296 aa12.2□□□□□ -0.46
MMP2-208ENST00000570308 GOLGA6L19H0YKK7 550 aa12.2□□□□□ -0.46
MMP2-208ENST00000570308 TUBB4AP04350 444 aa12.2□□□□□ -0.46
MMP2-208ENST00000570308 NBPF20Q3BBV1 942 aa12.2□□□□□ -0.46
MMP2-208ENST00000570308 GORABQ5T7V8 394 aa12.2□□□□□ -0.46
MMP2-208ENST00000570308 DNAAF4Q8WXU2 420 aa12.2□□□□□ -0.46
MMP2-208ENST00000570308 CEMIPQ8WUJ3 1361 aa12.2□□□□□ -0.46
MMP2-208ENST00000570308 ZNF165P49910 485 aa12.2□□□□□ -0.46
MMP2-208ENST00000570308 CORO7P57737 925 aa12.2□□□□□ -0.46
MMP2-208ENST00000570308 TWISTNBQ3B726 338 aaPredicted RBP12.2□□□□□ -0.46
MMP2-208ENST00000570308 CCDC93Q567U6 631 aa12.2□□□□□ -0.46
MMP2-208ENST00000570308 LRCH2Q5VUJ6 765 aa12.2□□□□□ -0.46
MMP2-208ENST00000570308 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.2□□□□□ -0.46
MMP2-208ENST00000570308 MKRN1Q9UHC7 482 aaKnown RBP12.2□□□□□ -0.46
MMP2-208ENST00000570308 PXDNLA1KZ92 1463 aa12.19□□□□□ -0.46
MMP2-208ENST00000570308 SYT1P21579 422 aa12.19□□□□□ -0.46
MMP2-208ENST00000570308 CKAP2LQ8IYA6 745 aa12.19□□□□□ -0.46
MMP2-208ENST00000570308 LRRN4CLQ8ND94 238 aa12.19□□□□□ -0.46
MMP2-208ENST00000570308 API5Q9BZZ5 524 aaKnown RBP12.19□□□□□ -0.46
MMP2-208ENST00000570308 C19orf44Q9H6X5 657 aa12.19□□□□□ -0.46
MMP2-208ENST00000570308 KCND1Q9NSA2 647 aa12.19□□□□□ -0.46
MMP2-208ENST00000570308 CHMP3Q9Y3E7 222 aa12.19□□□□□ -0.46
MMP2-208ENST00000570308 NUTM2FA1L443 756 aa12.19□□□□□ -0.46
MMP2-208ENST00000570308 TBC1D8O95759 1140 aa12.19□□□□□ -0.46
MMP2-208ENST00000570308 AMPHP49418 695 aa12.19□□□□□ -0.46
MMP2-208ENST00000570308 DNM1Q05193 864 aaKnown RBP12.19□□□□□ -0.46
MMP2-208ENST00000570308 ARID5BQ14865 1188 aa12.19□□□□□ -0.46
MMP2-208ENST00000570308 ABTB2Q8N961 1025 aa12.19□□□□□ -0.46
MMP2-208ENST00000570308 OTUD7AQ8TE49 926 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms