RNA–Protein interactions for RNA: ENST00000569882.1

CNOT1-219, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-219ENST00000569882 SMARCC1Q92922 1105 aaPredicted RBP6.43□□□□□ -1.38
CNOT1-219ENST00000569882 TFCP2L1Q9NZI6 479 aa6.43□□□□□ -1.38
CNOT1-219ENST00000569882 GMPR2Q9P2T1 348 aaKnown RBP6.43□□□□□ -1.38
CNOT1-219ENST00000569882 CCNL1Q9UK58 526 aaPredicted RBP6.43□□□□□ -1.38
CNOT1-219ENST00000569882 IGSF1Q8N6C5 1336 aa6.43□□□□□ -1.38
CNOT1-219ENST00000569882 ITGB4P16144 1822 aa6.43□□□□□ -1.38
CNOT1-219ENST00000569882 CABP4P57796 275 aa6.42□□□□□ -1.38
CNOT1-219ENST00000569882 USP46P62068 366 aa6.42□□□□□ -1.38
CNOT1-219ENST00000569882 FOXC1Q12948 553 aa6.42□□□□□ -1.38
CNOT1-219ENST00000569882 DDX10Q13206 875 aaKnown RBP6.42□□□□□ -1.38
CNOT1-219ENST00000569882 AK7Q96M32 723 aa6.42□□□□□ -1.38
CNOT1-219ENST00000569882 USB1Q9BQ65 265 aaKnown RBP6.42□□□□□ -1.38
CNOT1-219ENST00000569882 SPON1Q9HCB6 807 aa6.42□□□□□ -1.38
CNOT1-219ENST00000569882 PKD2L1Q9P0L9 805 aa6.42□□□□□ -1.38
CNOT1-219ENST00000569882 NPC1L1Q9UHC9 1359 aa6.42□□□□□ -1.38
CNOT1-219ENST00000569882 CYP27B1O15528 508 aa6.41□□□□□ -1.38
CNOT1-219ENST00000569882 U2AF1L5P0DN76 240 aaPredicted RBP6.41□□□□□ -1.38
CNOT1-219ENST00000569882 PHKG2P15735 406 aa6.41□□□□□ -1.38
CNOT1-219ENST00000569882 U2AF1Q01081 240 aaKnown RBP eCLIP6.41□□□□□ -1.384e-12■□□□□ 10.8
CNOT1-219ENST00000569882 AMHR2Q16671 573 aa6.41□□□□□ -1.38
CNOT1-219ENST00000569882 GIGYF2Q6Y7W6 1299 aaKnown RBP6.41□□□□□ -1.38
CNOT1-219ENST00000569882 NUTM1Q86Y26 1132 aa6.41□□□□□ -1.38
CNOT1-219ENST00000569882 AEBP1Q8IUX7 1158 aa6.41□□□□□ -1.38
CNOT1-219ENST00000569882 DCAF5Q96JK2 942 aa6.41□□□□□ -1.38
CNOT1-219ENST00000569882 PCDHGC3Q9UN70 934 aa6.41□□□□□ -1.38
CNOT1-219ENST00000569882 PALLDQ8WX93 1383 aa6.41□□□□□ -1.38
CNOT1-219ENST00000569882 PER1O15534 1290 aaPredicted RBP6.4□□□□□ -1.38
CNOT1-219ENST00000569882 ZBTB7AO95365 584 aa6.4□□□□□ -1.38
CNOT1-219ENST00000569882 NDUFV2P19404 249 aa6.4□□□□□ -1.38
CNOT1-219ENST00000569882 POLD1P28340 1107 aa6.4□□□□□ -1.38
CNOT1-219ENST00000569882 IL13P35225 146 aa6.4□□□□□ -1.38
CNOT1-219ENST00000569882 RPIAP49247 311 aa6.4□□□□□ -1.38
CNOT1-219ENST00000569882 MMP16P51512 607 aa6.4□□□□□ -1.38
CNOT1-219ENST00000569882 KCNQ4P56696 695 aa6.4□□□□□ -1.38
CNOT1-219ENST00000569882 SLC15A2Q16348 729 aa6.4□□□□□ -1.38
CNOT1-219ENST00000569882 GAS2L2Q8NHY3 880 aa6.4□□□□□ -1.38
CNOT1-219ENST00000569882 SPIRE2Q8WWL2 714 aa6.4□□□□□ -1.38
CNOT1-219ENST00000569882 RTF1Q92541 710 aaKnown RBP6.4□□□□□ -1.38
CNOT1-219ENST00000569882 MAPK8IP3Q9UPT6 1336 aa6.4□□□□□ -1.39
CNOT1-219ENST00000569882 LRP5O75197 1615 aa6.39□□□□□ -1.39
CNOT1-219ENST00000569882 C5P01031 1676 aa6.39□□□□□ -1.39
CNOT1-219ENST00000569882 LY75O60449 1722 aa6.39□□□□□ -1.39
CNOT1-219ENST00000569882 VIRMAQ69YN4 1812 aaKnown RBP6.39□□□□□ -1.39
CNOT1-219ENST00000569882 TERTO14746 1132 aaKnown RBP6.39□□□□□ -1.39
CNOT1-219ENST00000569882 TRIM66O15016 1216 aa6.39□□□□□ -1.39
CNOT1-219ENST00000569882 AXIN1O15169 862 aa6.39□□□□□ -1.39
CNOT1-219ENST00000569882 DXOO77932 396 aaKnown RBP6.39□□□□□ -1.39
CNOT1-219ENST00000569882 PPP2R1AP30153 589 aa6.39□□□□□ -1.39
CNOT1-219ENST00000569882 TEFQ10587 303 aa6.39□□□□□ -1.39
CNOT1-219ENST00000569882 AKAP4Q5JQC9 854 aa6.39□□□□□ -1.39
CNOT1-219ENST00000569882 NPM2Q86SE8 214 aaKnown RBP6.39□□□□□ -1.39
CNOT1-219ENST00000569882 PARP9Q8IXQ6 854 aa6.39□□□□□ -1.39
CNOT1-219ENST00000569882 TTC5Q8N0Z6 440 aa6.39□□□□□ -1.39
CNOT1-219ENST00000569882 PNNQ9H307 717 aaKnown RBP6.39□□□□□ -1.39
CNOT1-219ENST00000569882 PLEKHG2Q9H7P9 1386 aa6.39□□□□□ -1.39
CNOT1-219ENST00000569882 NCAPD2Q15021 1401 aa6.39□□□□□ -1.39
CNOT1-219ENST00000569882 TOGARAM1Q9Y4F4 1720 aa6.39□□□□□ -1.39
CNOT1-219ENST00000569882 LOC102724428A0A0B4J2F2 783 aa6.38□□□□□ -1.39
CNOT1-219ENST00000569882 ERVV-2B6SEH9 535 aa6.38□□□□□ -1.39
CNOT1-219ENST00000569882 CD2BP2O95400 341 aaKnown RBP6.38□□□□□ -1.39
CNOT1-219ENST00000569882 PRKAR2BP31323 418 aa6.38□□□□□ -1.39
CNOT1-219ENST00000569882 SIK1P57059 783 aa6.38□□□□□ -1.39
CNOT1-219ENST00000569882 WDR43Q15061 677 aaKnown RBP eCLIP6.38□□□□□ -1.39
CNOT1-219ENST00000569882 FLAD1Q8NFF5 587 aa6.38□□□□□ -1.39
CNOT1-219ENST00000569882 PIGBQ92521 554 aa6.38□□□□□ -1.39
CNOT1-219ENST00000569882 DACH1Q9UI36 760 aa6.38□□□□□ -1.39
CNOT1-219ENST00000569882 SCN11AQ9UI33 1791 aa6.37□□□□□ -1.39
CNOT1-219ENST00000569882 KDRP35968 1356 aa6.37□□□□□ -1.39
CNOT1-219ENST00000569882 MOXD2PA6NHM9 499 aa6.37□□□□□ -1.39
CNOT1-219ENST00000569882 GNAT3A8MTJ3 354 aa6.37□□□□□ -1.39
CNOT1-219ENST00000569882 PTCD1O75127 700 aaKnown RBP6.37□□□□□ -1.39
CNOT1-219ENST00000569882 FDX1P10109 184 aa6.37□□□□□ -1.39
CNOT1-219ENST00000569882 MS4A1P11836 297 aa6.37□□□□□ -1.39
CNOT1-219ENST00000569882 RALBP1Q15311 655 aa6.37□□□□□ -1.39
CNOT1-219ENST00000569882 CCDC24Q8N4L8 307 aa6.37□□□□□ -1.39
CNOT1-219ENST00000569882 ZSCAN1Q8NBB4 408 aa6.37□□□□□ -1.39
CNOT1-219ENST00000569882 NFATC2IPQ8NCF5 419 aa6.37□□□□□ -1.39
CNOT1-219ENST00000569882 BEGAINQ9BUH8 593 aa6.37□□□□□ -1.39
CNOT1-219ENST00000569882 MTFR1LQ9H019 292 aa6.37□□□□□ -1.39
CNOT1-219ENST00000569882 LRRC4BQ9NT99 713 aa6.37□□□□□ -1.39
CNOT1-219ENST00000569882 ASAP1Q9ULH1 1129 aa6.37□□□□□ -1.39
CNOT1-219ENST00000569882 TAF1LQ8IZX4 1826 aa6.36□□□□□ -1.39
CNOT1-219ENST00000569882 MAP3K5Q99683 1374 aa6.36□□□□□ -1.39
CNOT1-219ENST00000569882 C6orf229H3BNL8 230 aa6.36□□□□□ -1.39
CNOT1-219ENST00000569882 ZBTB24O43167 697 aaPredicted RBP6.36□□□□□ -1.39
CNOT1-219ENST00000569882 TRIM32Q13049 653 aa6.36□□□□□ -1.39
CNOT1-219ENST00000569882 ZNF827Q17R98 1081 aa6.36□□□□□ -1.39
CNOT1-219ENST00000569882 MTHFSDQ2M296 383 aaKnown RBP6.36□□□□□ -1.39
CNOT1-219ENST00000569882 CRIPAKQ8N1N5 446 aa6.36□□□□□ -1.39
CNOT1-219ENST00000569882 SLC16A10Q8TF71 515 aa6.36□□□□□ -1.39
CNOT1-219ENST00000569882 SLC24A3Q9HC58 644 aa6.36□□□□□ -1.39
CNOT1-219ENST00000569882 RTCBQ9Y3I0 505 aaKnown RBP6.36□□□□□ -1.39
CNOT1-219ENST00000569882 ZNF330Q9Y3S2 320 aaPredicted RBP6.36□□□□□ -1.39
CNOT1-219ENST00000569882 C4BP0C0L5 1744 aa6.36□□□□□ -1.39
CNOT1-219ENST00000569882 MYBBP1AQ9BQG0 1328 aaKnown RBP6.35□□□□□ -1.39
CNOT1-219ENST00000569882 TUBGCP6Q96RT7 1819 aa6.35□□□□□ -1.39
CNOT1-219ENST00000569882 RNMTO43148 476 aaKnown RBP6.35□□□□□ -1.39
CNOT1-219ENST00000569882 RFC4P35249 363 aa6.35□□□□□ -1.39
CNOT1-219ENST00000569882 MSL1Q68DK7 614 aa6.35□□□□□ -1.39
CNOT1-219ENST00000569882 SLC52A2Q9HAB3 445 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms