RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 NEURL1BA8MQ27 555 aa11.49□□□□□ -0.57
GTF3C1-210ENST00000569394 LMNB1P20700 586 aa11.49□□□□□ -0.57
GTF3C1-210ENST00000569394 UBE3BQ7Z3V4 1068 aa11.49□□□□□ -0.57
GTF3C1-210ENST00000569394 MRPL50Q8N5N7 158 aaKnown RBP11.49□□□□□ -0.57
GTF3C1-210ENST00000569394 ZBTB38Q8NAP3 1195 aaPredicted RBP11.49□□□□□ -0.57
GTF3C1-210ENST00000569394 CCDC191Q8NCU4 936 aa11.49□□□□□ -0.57
GTF3C1-210ENST00000569394 CELF1Q92879 486 aaKnown RBP11.49□□□□□ -0.57
GTF3C1-210ENST00000569394 SEC31BQ9NQW1 1179 aa11.49□□□□□ -0.57
GTF3C1-210ENST00000569394 SMC4Q9NTJ3 1288 aa11.49□□□□□ -0.57
GTF3C1-210ENST00000569394 C7orf43Q8WVR3 580 aa11.48□□□□□ -0.57
GTF3C1-210ENST00000569394 CRAMP1Q96RY5 1269 aa11.48□□□□□ -0.57
GTF3C1-210ENST00000569394 TMX4Q9H1E5 349 aaPredicted RBP11.48□□□□□ -0.57
GTF3C1-210ENST00000569394 NMRK2Q9NPI5 230 aa11.48□□□□□ -0.57
GTF3C1-210ENST00000569394 COL4A1P02462 1669 aa11.48□□□□□ -0.57
GTF3C1-210ENST00000569394 FER1L6Q2WGJ9 1857 aa11.48□□□□□ -0.57
GTF3C1-210ENST00000569394 PCCAP05165 728 aaPredicted RBP11.47□□□□□ -0.57
GTF3C1-210ENST00000569394 HOXA10P31260 410 aaPredicted RBP11.47□□□□□ -0.57
GTF3C1-210ENST00000569394 TRIM28Q13263 835 aaKnown RBP11.47□□□□□ -0.57
GTF3C1-210ENST00000569394 GCKRQ14397 625 aa11.47□□□□□ -0.57
GTF3C1-210ENST00000569394 RRAGCQ9HB90 399 aa11.47□□□□□ -0.57
GTF3C1-210ENST00000569394 CHMP3Q9Y3E7 222 aa11.47□□□□□ -0.57
GTF3C1-210ENST00000569394 RNF123Q5XPI4 1314 aa11.46□□□□□ -0.57
GTF3C1-210ENST00000569394 RIMBP2O15034 1052 aa11.46□□□□□ -0.57
GTF3C1-210ENST00000569394 PDE8AO60658 829 aa11.46□□□□□ -0.57
GTF3C1-210ENST00000569394 FKBP4Q02790 459 aaKnown RBP eCLIP11.46□□□□□ -0.57
GTF3C1-210ENST00000569394 GRAPQ13588 217 aa11.46□□□□□ -0.57
GTF3C1-210ENST00000569394 SOGA3Q5TF21 947 aa11.46□□□□□ -0.57
GTF3C1-210ENST00000569394 RTKN2Q8IZC4 609 aa11.46□□□□□ -0.57
GTF3C1-210ENST00000569394 GRAPLQ8TC17 118 aaPredicted RBP11.46□□□□□ -0.57
GTF3C1-210ENST00000569394 GPR101Q96P66 508 aaPredicted RBP11.46□□□□□ -0.57
GTF3C1-210ENST00000569394 ZBTB12Q9Y330 459 aaPredicted RBP11.46□□□□□ -0.57
GTF3C1-210ENST00000569394 CACNA1FO60840 1977 aa11.46□□□□□ -0.58
GTF3C1-210ENST00000569394 TIAM2Q8IVF5 1701 aa11.46□□□□□ -0.58
GTF3C1-210ENST00000569394 SPEF2Q9C093 1822 aa11.45□□□□□ -0.58
GTF3C1-210ENST00000569394 SF3B3Q15393 1217 aaKnown RBP11.45□□□□□ -0.58
GTF3C1-210ENST00000569394 BEND3Q5T5X7 828 aa11.45□□□□□ -0.58
GTF3C1-210ENST00000569394 TRMT2AQ8IZ69 625 aaKnown RBP11.45□□□□□ -0.58
GTF3C1-210ENST00000569394 LINS1Q8NG48 757 aa11.45□□□□□ -0.58
GTF3C1-210ENST00000569394 YTHDC1Q96MU7 727 aaKnown RBP11.45□□□□□ -0.58
GTF3C1-210ENST00000569394 C9orf78Q9NZ63 289 aaPredicted RBP11.45□□□□□ -0.58
GTF3C1-210ENST00000569394 NOB1Q9ULX3 412 aaKnown RBP11.45□□□□□ -0.58
GTF3C1-210ENST00000569394 NSFL1CQ9UNZ2 370 aaKnown RBP11.45□□□□□ -0.58
GTF3C1-210ENST00000569394 ATP6V0A2Q9Y487 856 aa11.45□□□□□ -0.58
GTF3C1-210ENST00000569394 RIC1Q4ADV7 1423 aa11.44□□□□□ -0.58
GTF3C1-210ENST00000569394 BBOX1O75936 387 aa11.44□□□□□ -0.58
GTF3C1-210ENST00000569394 DDNO94850 711 aaPredicted RBP11.44□□□□□ -0.58
GTF3C1-210ENST00000569394 IARSP41252 1262 aaKnown RBP11.44□□□□□ -0.58
GTF3C1-210ENST00000569394 CTSWP56202 376 aa11.44□□□□□ -0.58
GTF3C1-210ENST00000569394 AOC3Q16853 763 aa11.44□□□□□ -0.58
GTF3C1-210ENST00000569394 CCDC152Q4G0S7 254 aa11.44□□□□□ -0.58
GTF3C1-210ENST00000569394 DPP8Q6V1X1 898 aaPredicted RBP11.44□□□□□ -0.58
GTF3C1-210ENST00000569394 LARGE2Q8N3Y3 721 aa11.44□□□□□ -0.58
GTF3C1-210ENST00000569394 MPNDQ8N594 471 aa11.44□□□□□ -0.58
GTF3C1-210ENST00000569394 FRAT1Q92837 279 aaPredicted RBP11.44□□□□□ -0.58
GTF3C1-210ENST00000569394 SRCIN1Q9C0H9 1055 aa11.44□□□□□ -0.58
GTF3C1-210ENST00000569394 GREM2Q9H772 168 aa11.44□□□□□ -0.58
GTF3C1-210ENST00000569394 GJA3Q9Y6H8 435 aa11.44□□□□□ -0.58
GTF3C1-210ENST00000569394 C6orf229H3BNL8 230 aa11.43□□□□□ -0.58
GTF3C1-210ENST00000569394 H7C1W4 665 aa11.43□□□□□ -0.58
GTF3C1-210ENST00000569394 PPIP5K2O43314 1243 aa11.43□□□□□ -0.58
GTF3C1-210ENST00000569394 BCAR3O75815 825 aa11.43□□□□□ -0.58
GTF3C1-210ENST00000569394 RPS8P62241 208 aaKnown RBP11.43□□□□□ -0.58
GTF3C1-210ENST00000569394 GPSM2P81274 684 aa11.43□□□□□ -0.58
GTF3C1-210ENST00000569394 SP8Q8IXZ3 490 aa11.43□□□□□ -0.58
GTF3C1-210ENST00000569394 TTLL11Q8NHH1 800 aa11.43□□□□□ -0.58
GTF3C1-210ENST00000569394 TNNQ9UQP3 1299 aa11.43□□□□□ -0.58
GTF3C1-210ENST00000569394 KDM2BQ8NHM5 1336 aa11.42□□□□□ -0.58
GTF3C1-210ENST00000569394 CDHR2Q9BYE9 1310 aa11.42□□□□□ -0.58
GTF3C1-210ENST00000569394 ZNF541Q9H0D2 1346 aa11.42□□□□□ -0.58
GTF3C1-210ENST00000569394 FAM161AQ3B820 660 aa11.42□□□□□ -0.58
GTF3C1-210ENST00000569394 EPHA10Q5JZY3 1008 aa11.42□□□□□ -0.58
GTF3C1-210ENST00000569394 DPY19L2Q6NUT2 758 aa11.42□□□□□ -0.58
GTF3C1-210ENST00000569394 ANKRD18AQ8IVF6 992 aa11.42□□□□□ -0.58
GTF3C1-210ENST00000569394 C16orf71Q8IYS4 520 aaPredicted RBP11.42□□□□□ -0.58
GTF3C1-210ENST00000569394 JDP2Q8WYK2 163 aa11.42□□□□□ -0.58
GTF3C1-210ENST00000569394 ANKIB1Q9P2G1 1089 aa11.42□□□□□ -0.58
GTF3C1-210ENST00000569394 DICER1Q9UPY3 1922 aaKnown RBP11.42□□□□□ -0.58
GTF3C1-210ENST00000569394 MYH3P11055 1940 aa11.41□□□□□ -0.58
GTF3C1-210ENST00000569394 WTIPA6NIX2 430 aaPredicted RBP11.41□□□□□ -0.58
GTF3C1-210ENST00000569394 GRM8O00222 908 aa11.41□□□□□ -0.58
GTF3C1-210ENST00000569394 NBPF7P0C2Y1 421 aaPredicted RBP11.41□□□□□ -0.58
GTF3C1-210ENST00000569394 HSP90B1P14625 803 aaKnown RBP11.41□□□□□ -0.58
GTF3C1-210ENST00000569394 RARSP54136 660 aaKnown RBP11.41□□□□□ -0.58
GTF3C1-210ENST00000569394 CASP7P55210 303 aa11.41□□□□□ -0.58
GTF3C1-210ENST00000569394 DOK7Q18PE1 504 aa11.41□□□□□ -0.58
GTF3C1-210ENST00000569394 ALDH1L2Q3SY69 923 aa11.41□□□□□ -0.58
GTF3C1-210ENST00000569394 CC2D2BQ6DHV5 1058 aa11.41□□□□□ -0.58
GTF3C1-210ENST00000569394 POTEDQ86YR6 584 aa11.41□□□□□ -0.58
GTF3C1-210ENST00000569394 CLUAP1Q96AJ1 413 aa11.41□□□□□ -0.58
GTF3C1-210ENST00000569394 ZNF594Q96JF6 807 aaPredicted RBP11.41□□□□□ -0.58
GTF3C1-210ENST00000569394 LTBP3Q9NS15 1303 aa11.4□□□□□ -0.58
GTF3C1-210ENST00000569394 COL4A5P29400 1685 aa11.4□□□□□ -0.58
GTF3C1-210ENST00000569394 GLTPD2A6NH11 291 aa11.4□□□□□ -0.58
GTF3C1-210ENST00000569394 KIF3CO14782 793 aa11.4□□□□□ -0.58
GTF3C1-210ENST00000569394 PLIN1O60240 522 aa11.4□□□□□ -0.58
GTF3C1-210ENST00000569394 HSPA6P17066 643 aa11.4□□□□□ -0.58
GTF3C1-210ENST00000569394 ITGA6P23229 1130 aa11.4□□□□□ -0.58
GTF3C1-210ENST00000569394 LMBR1LQ6UX01 489 aa11.4□□□□□ -0.58
GTF3C1-210ENST00000569394 NIM1KQ8IY84 436 aa11.4□□□□□ -0.58
GTF3C1-210ENST00000569394 SUCLG2Q96I99 432 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms