RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 LINC00114Q6XXX2 140 aa6.28□□□□□ -1.4
HMGB1P6-201ENST00000569046 UBE2OQ9C0C9 1292 aaKnown RBP6.28□□□□□ -1.4
HMGB1P6-201ENST00000569046 EFCC1Q9HA90 598 aa6.28□□□□□ -1.4
HMGB1P6-201ENST00000569046 DNAJB12Q9NXW2 375 aaKnown RBP6.28□□□□□ -1.4
HMGB1P6-201ENST00000569046 MMP20O60882 483 aa6.27□□□□□ -1.41
HMGB1P6-201ENST00000569046 MAP3K6O95382 1288 aa6.27□□□□□ -1.41
HMGB1P6-201ENST00000569046 PDE4CQ08493 712 aa6.27□□□□□ -1.41
HMGB1P6-201ENST00000569046 PIK3R5Q8WYR1 880 aa6.27□□□□□ -1.41
HMGB1P6-201ENST00000569046 EDEM1Q92611 657 aa6.27□□□□□ -1.41
HMGB1P6-201ENST00000569046 NUDT16Q96DE0 195 aaKnown RBP6.27□□□□□ -1.41
HMGB1P6-201ENST00000569046 RRAGCQ9HB90 399 aa6.27□□□□□ -1.41
HMGB1P6-201ENST00000569046 NAGPAQ9UK23 515 aa6.27□□□□□ -1.41
HMGB1P6-201ENST00000569046 MTMR7Q9Y216 660 aa6.27□□□□□ -1.41
HMGB1P6-201ENST00000569046 A6NHS1 94 aa6.26□□□□□ -1.41
HMGB1P6-201ENST00000569046 UBAP1LF5GYI3 381 aa6.26□□□□□ -1.41
HMGB1P6-201ENST00000569046 ICMTO60725 284 aa6.26□□□□□ -1.41
HMGB1P6-201ENST00000569046 ALBP02768 609 aa6.26□□□□□ -1.41
HMGB1P6-201ENST00000569046 ALAS2P22557 587 aa6.26□□□□□ -1.41
HMGB1P6-201ENST00000569046 MLLT1Q03111 559 aaPredicted RBP6.26□□□□□ -1.41
HMGB1P6-201ENST00000569046 DNM1Q05193 864 aaKnown RBP6.26□□□□□ -1.41
HMGB1P6-201ENST00000569046 SF3B2Q13435 895 aaKnown RBP6.26□□□□□ -1.41
HMGB1P6-201ENST00000569046 C8orf86Q6ZUL3 223 aa6.26□□□□□ -1.41
HMGB1P6-201ENST00000569046 DHX32Q7L7V1 743 aaKnown RBP6.26□□□□□ -1.41
HMGB1P6-201ENST00000569046 GGNBP2Q9H3C7 697 aa6.26□□□□□ -1.41
HMGB1P6-201ENST00000569046 FAM13BQ9NYF5 915 aa6.26□□□□□ -1.41
HMGB1P6-201ENST00000569046 SLC6A14Q9UN76 642 aa6.26□□□□□ -1.41
HMGB1P6-201ENST00000569046 H3BRB1 525 aa6.25□□□□□ -1.41
HMGB1P6-201ENST00000569046 FZD6O60353 706 aa6.25□□□□□ -1.41
HMGB1P6-201ENST00000569046 FAM13AO94988 1023 aa6.25□□□□□ -1.41
HMGB1P6-201ENST00000569046 PDGFAP04085 211 aa6.25□□□□□ -1.41
HMGB1P6-201ENST00000569046 IRS1P35568 1242 aa6.25□□□□□ -1.41
HMGB1P6-201ENST00000569046 KCNMA1Q12791 1236 aa6.25□□□□□ -1.41
HMGB1P6-201ENST00000569046 COL9A3Q14050 684 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P6-201ENST00000569046 C20orf204Q6ZNR8 217 aa6.25□□□□□ -1.41
HMGB1P6-201ENST00000569046 NLRP13Q86W25 1043 aa6.25□□□□□ -1.41
HMGB1P6-201ENST00000569046 TRPM4Q8TD43 1214 aa6.25□□□□□ -1.41
HMGB1P6-201ENST00000569046 SCARF2Q96GP6 870 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P6-201ENST00000569046 SUV39H2Q9H5I1 410 aa6.25□□□□□ -1.41
HMGB1P6-201ENST00000569046 TUT1Q9H6E5 874 aaKnown RBP6.25□□□□□ -1.41
HMGB1P6-201ENST00000569046 CCDC87Q9NVE4 849 aa6.25□□□□□ -1.41
HMGB1P6-201ENST00000569046 TLR7Q9NYK1 1049 aaKnown RBP6.25□□□□□ -1.41
HMGB1P6-201ENST00000569046 EGFL7Q9UHF1 273 aa6.25□□□□□ -1.41
HMGB1P6-201ENST00000569046 POLIQ9UNA4 740 aa6.25□□□□□ -1.41
HMGB1P6-201ENST00000569046 M0R082 166 aa6.24□□□□□ -1.41
HMGB1P6-201ENST00000569046 BRD1O95696 1058 aa6.24□□□□□ -1.41
HMGB1P6-201ENST00000569046 MZF1P28698 734 aaPredicted RBP6.24□□□□□ -1.41
HMGB1P6-201ENST00000569046 ARHGAP4P98171 946 aa6.24□□□□□ -1.41
HMGB1P6-201ENST00000569046 HFE2Q6ZVN8 426 aa6.24□□□□□ -1.41
HMGB1P6-201ENST00000569046 MICALL1Q8N3F8 863 aa6.24□□□□□ -1.41
HMGB1P6-201ENST00000569046 BEND7Q8N7W2 519 aaPredicted RBP6.24□□□□□ -1.41
HMGB1P6-201ENST00000569046 ZNF417Q8TAU3 575 aa6.24□□□□□ -1.41
HMGB1P6-201ENST00000569046 ZNF587Q96SQ5 575 aaPredicted RBP6.24□□□□□ -1.41
HMGB1P6-201ENST00000569046 TMEM63CQ9P1W3 806 aa6.24□□□□□ -1.41
HMGB1P6-201ENST00000569046 MKL2Q9ULH7 1088 aa6.24□□□□□ -1.41
HMGB1P6-201ENST00000569046 CYP2E1P05181 493 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P6-201ENST00000569046 CPB1P15086 417 aa6.23□□□□□ -1.41
HMGB1P6-201ENST00000569046 GPLD1P80108 840 aa6.23□□□□□ -1.41
HMGB1P6-201ENST00000569046 RASSF7Q02833 373 aa6.23□□□□□ -1.41
HMGB1P6-201ENST00000569046 PLAURQ03405 335 aa6.23□□□□□ -1.41
HMGB1P6-201ENST00000569046 AAMPQ13685 434 aa6.23□□□□□ -1.41
HMGB1P6-201ENST00000569046 ALKBH2Q6NS38 261 aa6.23□□□□□ -1.41
HMGB1P6-201ENST00000569046 PODNQ7Z5L7 613 aa6.23□□□□□ -1.41
HMGB1P6-201ENST00000569046 NUDT8Q8WV74 236 aa6.23□□□□□ -1.41
HMGB1P6-201ENST00000569046 TRIM11Q96F44 468 aa6.23□□□□□ -1.41
HMGB1P6-201ENST00000569046 TRAIPQ9BWF2 469 aa6.23□□□□□ -1.41
HMGB1P6-201ENST00000569046 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P6-201ENST00000569046 J3QW42 95 aa6.22□□□□□ -1.41
HMGB1P6-201ENST00000569046 COL8A1P27658 744 aa6.22□□□□□ -1.41
HMGB1P6-201ENST00000569046 NRLP54845 237 aa6.22□□□□□ -1.41
HMGB1P6-201ENST00000569046 C8orf34Q49A92 452 aa6.22□□□□□ -1.41
HMGB1P6-201ENST00000569046 PERM1Q5SV97 790 aa6.22□□□□□ -1.41
HMGB1P6-201ENST00000569046 COL13A1Q5TAT6 717 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P6-201ENST00000569046 PSAPL1Q6NUJ1 521 aa6.22□□□□□ -1.41
HMGB1P6-201ENST00000569046 KANK3Q6NY19 840 aa6.22□□□□□ -1.41
HMGB1P6-201ENST00000569046 FAM35AQ86V20 835 aa6.22□□□□□ -1.41
HMGB1P6-201ENST00000569046 GLYCTKQ8IVS8 523 aa6.22□□□□□ -1.41
HMGB1P6-201ENST00000569046 OR13H1Q8NG92 308 aa6.22□□□□□ -1.41
HMGB1P6-201ENST00000569046 NSUN5Q96P11 429 aaKnown RBP6.22□□□□□ -1.41
HMGB1P6-201ENST00000569046 LPIN3Q9BQK8 851 aa6.22□□□□□ -1.41
HMGB1P6-201ENST00000569046 ELP3Q9H9T3 547 aa6.22□□□□□ -1.41
HMGB1P6-201ENST00000569046 CNTN3Q9P232 1028 aa6.22□□□□□ -1.41
HMGB1P6-201ENST00000569046 GNEQ9Y223 722 aaKnown RBP6.22□□□□□ -1.41
HMGB1P6-201ENST00000569046 FNDC3AQ9Y2H6 1198 aaKnown RBP6.22□□□□□ -1.41
HMGB1P6-201ENST00000569046 UNC13AQ9UPW8 1703 aa6.22□□□□□ -1.41
HMGB1P6-201ENST00000569046 PHF20L1A8MW92 1017 aa6.21□□□□□ -1.42
HMGB1P6-201ENST00000569046 RNF225M0QZC1 329 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P6-201ENST00000569046 PSAPP07602 524 aa6.21□□□□□ -1.42
HMGB1P6-201ENST00000569046 SOX18P35713 384 aa6.21□□□□□ -1.42
HMGB1P6-201ENST00000569046 PDE12Q6L8Q7 609 aaKnown RBP6.21□□□□□ -1.42
HMGB1P6-201ENST00000569046 XKR5Q6UX68 686 aa6.21□□□□□ -1.42
HMGB1P6-201ENST00000569046 ZNF438Q7Z4V0 828 aa6.21□□□□□ -1.42
HMGB1P6-201ENST00000569046 CCER1Q8TC90 406 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P6-201ENST00000569046 ABI2Q9NYB9 513 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P6-201ENST00000569046 RB1CC1Q8TDY2 1594 aa6.2□□□□□ -1.42
HMGB1P6-201ENST00000569046 LOC102724428A0A0B4J2F2 783 aa6.2□□□□□ -1.42
HMGB1P6-201ENST00000569046 SOWAHDA6NJG2 315 aa6.2□□□□□ -1.42
HMGB1P6-201ENST00000569046 GNB5O14775 395 aa6.2□□□□□ -1.42
HMGB1P6-201ENST00000569046 HOXD8P13378 290 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P6-201ENST00000569046 NID1P14543 1247 aa6.2□□□□□ -1.42
HMGB1P6-201ENST00000569046 SIK1P57059 783 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms