RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 OVOS2Q6IE36 1432 aa8.26□□□□□ -1.09
CDH13-211ENST00000568770 COL5A2P05997 1499 aaPredicted RBP8.26□□□□□ -1.09
CDH13-211ENST00000568770 CPDO75976 1380 aa8.25□□□□□ -1.09
CDH13-211ENST00000568770 SENP3-EIF4A1A0A087X0R7 540 aa8.25□□□□□ -1.09
CDH13-211ENST00000568770 C11orf95C9JLR9 678 aaPredicted RBP8.25□□□□□ -1.09
CDH13-211ENST00000568770 PLSCR1O15162 318 aa8.25□□□□□ -1.09
CDH13-211ENST00000568770 RGS20O76081 388 aa8.25□□□□□ -1.09
CDH13-211ENST00000568770 ZBTB7AO95365 584 aa8.25□□□□□ -1.09
CDH13-211ENST00000568770 ALDH1A1P00352 501 aa8.25□□□□□ -1.09
CDH13-211ENST00000568770 RAB15P59190 212 aa8.25□□□□□ -1.09
CDH13-211ENST00000568770 MCCD1P59942 119 aaPredicted RBP8.25□□□□□ -1.09
CDH13-211ENST00000568770 MPNDQ8N594 471 aa8.25□□□□□ -1.09
CDH13-211ENST00000568770 ABTB2Q8N961 1025 aa8.25□□□□□ -1.09
CDH13-211ENST00000568770 CCDC85AQ96PX6 553 aaPredicted RBP8.25□□□□□ -1.09
CDH13-211ENST00000568770 TOR4AQ9NXH8 423 aa8.25□□□□□ -1.09
CDH13-211ENST00000568770 MAP4K5Q9Y4K4 846 aa8.25□□□□□ -1.09
CDH13-211ENST00000568770 COL18A1P39060 1754 aa8.25□□□□□ -1.09
CDH13-211ENST00000568770 KAT6BQ8WYB5 2073 aa8.25□□□□□ -1.09
CDH13-211ENST00000568770 POLR3AO14802 1390 aaPredicted RBP8.24□□□□□ -1.09
CDH13-211ENST00000568770 CRB1P82279 1406 aa8.24□□□□□ -1.09
CDH13-211ENST00000568770 PALM3A6NDB9 673 aaPredicted RBP8.24□□□□□ -1.09
CDH13-211ENST00000568770 NR3C2P08235 984 aa8.24□□□□□ -1.09
CDH13-211ENST00000568770 INTS6LQ5JSJ4 861 aaKnown RBP8.24□□□□□ -1.09
CDH13-211ENST00000568770 PTF1AQ7RTS3 328 aa8.24□□□□□ -1.09
CDH13-211ENST00000568770 SNIP1Q8TAD8 396 aaKnown RBP8.24□□□□□ -1.09
CDH13-211ENST00000568770 CDK19Q9BWU1 502 aa8.24□□□□□ -1.09
CDH13-211ENST00000568770 PPP1R12CQ9BZL4 782 aa8.24□□□□□ -1.09
CDH13-211ENST00000568770 ACEP12821 1306 aa8.24□□□□□ -1.09
CDH13-211ENST00000568770 C1QTNF8P60827 252 aa8.23□□□□□ -1.09
CDH13-211ENST00000568770 CDCA7Q9BWT1 371 aaPredicted RBP8.23□□□□□ -1.09
CDH13-211ENST00000568770 USP19O94966 1318 aa8.23□□□□□ -1.09
CDH13-211ENST00000568770 TTC24A2A3L6 582 aaPredicted RBP8.22□□□□□ -1.09
CDH13-211ENST00000568770 ERVH48-1M5A8F1 160 aa8.22□□□□□ -1.09
CDH13-211ENST00000568770 ADH1CP00326 375 aa8.22□□□□□ -1.09
CDH13-211ENST00000568770 GCP02774 474 aa8.22□□□□□ -1.09
CDH13-211ENST00000568770 SKIP12755 728 aa8.22□□□□□ -1.09
CDH13-211ENST00000568770 SMPD1P17405 629 aa8.22□□□□□ -1.09
CDH13-211ENST00000568770 FSHRP23945 695 aa8.22□□□□□ -1.09
CDH13-211ENST00000568770 PRR20EP86478 221 aa8.22□□□□□ -1.09
CDH13-211ENST00000568770 PRR20CP86479 221 aa8.22□□□□□ -1.09
CDH13-211ENST00000568770 PRR20DP86480 221 aa8.22□□□□□ -1.09
CDH13-211ENST00000568770 PRR20BP86481 221 aa8.22□□□□□ -1.09
CDH13-211ENST00000568770 PRR20AP86496 221 aa8.22□□□□□ -1.09
CDH13-211ENST00000568770 DDB1Q16531 1140 aa8.22□□□□□ -1.09
CDH13-211ENST00000568770 NBPF20Q3BBV1 942 aa8.22□□□□□ -1.09
CDH13-211ENST00000568770 SLFNL1Q499Z3 407 aa8.22□□□□□ -1.09
CDH13-211ENST00000568770 RNF135Q8IUD6 432 aa8.22□□□□□ -1.09
CDH13-211ENST00000568770 CYP4X1Q8N118 509 aa8.22□□□□□ -1.09
CDH13-211ENST00000568770 DCAF11Q8TEB1 546 aa8.22□□□□□ -1.09
CDH13-211ENST00000568770 SYT17Q9BSW7 474 aa8.22□□□□□ -1.09
CDH13-211ENST00000568770 FHDC1Q9C0D6 1143 aaPredicted RBP8.22□□□□□ -1.09
CDH13-211ENST00000568770 TMPRSS4Q9NRS4 437 aa8.22□□□□□ -1.09
CDH13-211ENST00000568770 SERPINA10Q9UK55 444 aa8.22□□□□□ -1.09
CDH13-211ENST00000568770 CDV3Q9UKY7 258 aaKnown RBP8.22□□□□□ -1.09
CDH13-211ENST00000568770 ZBTB7CA1YPR0 619 aa8.21□□□□□ -1.1
CDH13-211ENST00000568770 RFX1P22670 979 aa8.21□□□□□ -1.1
CDH13-211ENST00000568770 TRAF7Q6Q0C0 670 aa8.21□□□□□ -1.1
CDH13-211ENST00000568770 NLRP13Q86W25 1043 aa8.21□□□□□ -1.1
CDH13-211ENST00000568770 DEPDC4Q8N2C3 294 aa8.21□□□□□ -1.1
CDH13-211ENST00000568770 CCDC97Q96F63 343 aaPredicted RBP8.21□□□□□ -1.1
CDH13-211ENST00000568770 PDZRN3Q9UPQ7 1066 aa8.21□□□□□ -1.1
CDH13-211ENST00000568770 KIAA1210Q9ULL0 1709 aa8.2□□□□□ -1.1
CDH13-211ENST00000568770 BTAF1O14981 1849 aa8.2□□□□□ -1.1
CDH13-211ENST00000568770 ATP9BO43861 1147 aa8.2□□□□□ -1.1
CDH13-211ENST00000568770 MARCH10Q8NA82 808 aaPredicted RBP8.2□□□□□ -1.1
CDH13-211ENST00000568770 PLPP7Q8NBV4 271 aa8.2□□□□□ -1.1
CDH13-211ENST00000568770 STK32BQ9NY57 414 aa8.2□□□□□ -1.1
CDH13-211ENST00000568770 MAFBQ9Y5Q3 323 aaPredicted RBP8.2□□□□□ -1.1
CDH13-211ENST00000568770 PIK3C2AO00443 1686 aa8.2□□□□□ -1.1
CDH13-211ENST00000568770 NHSQ6T4R5 1651 aa8.2□□□□□ -1.1
CDH13-211ENST00000568770 SLIT3O75094 1523 aa8.19□□□□□ -1.1
CDH13-211ENST00000568770 QRICH2Q9H0J4 1663 aa8.19□□□□□ -1.1
CDH13-211ENST00000568770 LMOD1P29536 600 aaPredicted RBP8.19□□□□□ -1.1
CDH13-211ENST00000568770 NR5A1Q13285 461 aa8.19□□□□□ -1.1
CDH13-211ENST00000568770 NNTQ13423 1086 aa8.19□□□□□ -1.1
CDH13-211ENST00000568770 SLC15A2Q16348 729 aa8.19□□□□□ -1.1
CDH13-211ENST00000568770 TXNRD1Q16881 649 aa8.19□□□□□ -1.1
CDH13-211ENST00000568770 TOM1L2Q6ZVM7 507 aa8.19□□□□□ -1.1
CDH13-211ENST00000568770 ZNF592Q92610 1267 aa8.19□□□□□ -1.1
CDH13-211ENST00000568770 MTFR1LQ9H019 292 aa8.19□□□□□ -1.1
CDH13-211ENST00000568770 PCDHB11Q9Y5F2 797 aa8.19□□□□□ -1.1
CDH13-211ENST00000568770 AATKQ6ZMQ8 1374 aa8.19□□□□□ -1.1
CDH13-211ENST00000568770 BCL9O00512 1426 aa8.19□□□□□ -1.1
CDH13-211ENST00000568770 PPIP5K1Q6PFW1 1433 aa8.19□□□□□ -1.1
CDH13-211ENST00000568770 PAPPAQ13219 1627 aa8.18□□□□□ -1.1
CDH13-211ENST00000568770 COL24A1Q17RW2 1714 aa8.18□□□□□ -1.1
CDH13-211ENST00000568770 QSER1Q2KHR3 1735 aa8.18□□□□□ -1.1
CDH13-211ENST00000568770 TUBGCP6Q96RT7 1819 aa8.18□□□□□ -1.1
CDH13-211ENST00000568770 USP17L5A8MUK1 530 aa8.18□□□□□ -1.1
CDH13-211ENST00000568770 SCTRP47872 440 aa8.18□□□□□ -1.1
CDH13-211ENST00000568770 SRPK2P78362 688 aaKnown RBP8.18□□□□□ -1.1
CDH13-211ENST00000568770 PPP1R26Q5T8A7 1209 aaPredicted RBP8.18□□□□□ -1.1
CDH13-211ENST00000568770 NFATC2IPQ8NCF5 419 aa8.18□□□□□ -1.1
CDH13-211ENST00000568770 HPS1Q92902 700 aa8.18□□□□□ -1.1
CDH13-211ENST00000568770 KLF16Q9BXK1 252 aaPredicted RBP8.18□□□□□ -1.1
CDH13-211ENST00000568770 WASF2Q9Y6W5 498 aa8.18□□□□□ -1.1
CDH13-211ENST00000568770 SHANK3Q9BYB0 1731 aa8.17□□□□□ -1.1
CDH13-211ENST00000568770 NCOA4Q13772 614 aa8.17□□□□□ -1.1
CDH13-211ENST00000568770 CDCA8Q53HL2 280 aa8.17□□□□□ -1.1
CDH13-211ENST00000568770 RNF20Q5VTR2 975 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms