RNA–Protein interactions for RNA: ENST00000568413.1

RPAP1-211, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 3

Gene RPAP1, Length 586 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-211ENST00000568413 ALDH1B1P30837 517 aa11.2□□□□□ -0.62
RPAP1-211ENST00000568413 CASP7P55210 303 aa11.2□□□□□ -0.62
RPAP1-211ENST00000568413 SF3B3Q15393 1217 aaKnown RBP11.2□□□□□ -0.62
RPAP1-211ENST00000568413 CRY2Q49AN0 593 aa11.2□□□□□ -0.62
RPAP1-211ENST00000568413 STYK1Q6J9G0 422 aa11.2□□□□□ -0.62
RPAP1-211ENST00000568413 RPGRQ92834 1020 aaKnown RBP11.2□□□□□ -0.62
RPAP1-211ENST00000568413 CNKSR1Q969H4 720 aa11.2□□□□□ -0.62
RPAP1-211ENST00000568413 ZNF622Q969S3 477 aaKnown RBP eCLIP11.2□□□□□ -0.62
RPAP1-211ENST00000568413 USP44Q9H0E7 712 aa11.2□□□□□ -0.62
RPAP1-211ENST00000568413 TIAM2Q8IVF5 1701 aa11.2□□□□□ -0.62
RPAP1-211ENST00000568413 UTYO14607 1347 aa11.19□□□□□ -0.62
RPAP1-211ENST00000568413 PLIN1O60240 522 aa11.19□□□□□ -0.62
RPAP1-211ENST00000568413 HOXA10P31260 410 aaPredicted RBP11.19□□□□□ -0.62
RPAP1-211ENST00000568413 PRELPP51888 382 aa11.19□□□□□ -0.62
RPAP1-211ENST00000568413 PDE3AQ14432 1141 aa11.19□□□□□ -0.62
RPAP1-211ENST00000568413 TTLL6Q8N841 843 aa11.19□□□□□ -0.62
RPAP1-211ENST00000568413 RBM17Q96I25 401 aaKnown RBP11.19□□□□□ -0.62
RPAP1-211ENST00000568413 PLA2G12BQ9BX93 195 aa11.19□□□□□ -0.62
RPAP1-211ENST00000568413 ZNF219Q9P2Y4 722 aaPredicted RBP11.19□□□□□ -0.62
RPAP1-211ENST00000568413 TNNQ9UQP3 1299 aa11.19□□□□□ -0.62
RPAP1-211ENST00000568413 GNAI3P08754 354 aa11.18□□□□□ -0.62
RPAP1-211ENST00000568413 NBPF7P0C2Y1 421 aaPredicted RBP11.18□□□□□ -0.62
RPAP1-211ENST00000568413 HTRA3P83110 453 aa11.18□□□□□ -0.62
RPAP1-211ENST00000568413 CCDC152Q4G0S7 254 aa11.18□□□□□ -0.62
RPAP1-211ENST00000568413 C3orf67Q6ZVT6 689 aa11.18□□□□□ -0.62
RPAP1-211ENST00000568413 DDX46Q7L014 1031 aaKnown RBP11.18□□□□□ -0.62
RPAP1-211ENST00000568413 TMEM57Q8N5G2 664 aa11.18□□□□□ -0.62
RPAP1-211ENST00000568413 CRAMP1Q96RY5 1269 aa11.18□□□□□ -0.62
RPAP1-211ENST00000568413 WDR90Q96KV7 1748 aa11.18□□□□□ -0.62
RPAP1-211ENST00000568413 TNRC6CQ9HCJ0 1690 aaKnown RBP11.17□□□□□ -0.62
RPAP1-211ENST00000568413 CSF1RP07333 972 aa11.17□□□□□ -0.62
RPAP1-211ENST00000568413 UBTFL1P0CB47 393 aaPredicted RBP11.17□□□□□ -0.62
RPAP1-211ENST00000568413 RLBP1P12271 317 aa11.17□□□□□ -0.62
RPAP1-211ENST00000568413 CTSWP56202 376 aa11.17□□□□□ -0.62
RPAP1-211ENST00000568413 TTLL11Q8NHH1 800 aa11.17□□□□□ -0.62
RPAP1-211ENST00000568413 PANK1Q8TE04 598 aa11.17□□□□□ -0.62
RPAP1-211ENST00000568413 BBOX1O75936 387 aa11.16□□□□□ -0.62
RPAP1-211ENST00000568413 TOMM70O94826 608 aa11.16□□□□□ -0.62
RPAP1-211ENST00000568413 RRP1P56182 461 aaKnown RBP11.16□□□□□ -0.62
RPAP1-211ENST00000568413 FOXO4P98177 505 aa11.16□□□□□ -0.62
RPAP1-211ENST00000568413 ITPRIPQ8IWB1 547 aa11.16□□□□□ -0.62
RPAP1-211ENST00000568413 CHMP4BQ9H444 224 aaKnown RBP11.16□□□□□ -0.62
RPAP1-211ENST00000568413 RRAGCQ9HB90 399 aa11.16□□□□□ -0.62
RPAP1-211ENST00000568413 SLX4Q8IY92 1834 aa11.16□□□□□ -0.62
RPAP1-211ENST00000568413 DDX60Q8IY21 1712 aaKnown RBP11.15□□□□□ -0.62
RPAP1-211ENST00000568413 NFKBIEO00221 500 aa11.15□□□□□ -0.62
RPAP1-211ENST00000568413 ZBTB7BO15156 539 aaPredicted RBP11.15□□□□□ -0.62
RPAP1-211ENST00000568413 PRPF40BQ6NWY9 871 aaKnown RBP11.15□□□□□ -0.62
RPAP1-211ENST00000568413 LMBR1LQ6UX01 489 aa11.15□□□□□ -0.62
RPAP1-211ENST00000568413 SUCLG2Q96I99 432 aa11.15□□□□□ -0.62
RPAP1-211ENST00000568413 MEIS3Q99687 375 aa11.15□□□□□ -0.62
RPAP1-211ENST00000568413 GNAI2P04899 355 aa11.14□□□□□ -0.63
RPAP1-211ENST00000568413 RPS8P62241 208 aaKnown RBP11.14□□□□□ -0.63
RPAP1-211ENST00000568413 GRAPQ13588 217 aa11.14□□□□□ -0.63
RPAP1-211ENST00000568413 MVPQ14764 893 aaKnown RBP11.14□□□□□ -0.63
RPAP1-211ENST00000568413 EPHA10Q5JZY3 1008 aa11.14□□□□□ -0.63
RPAP1-211ENST00000568413 SOGA3Q5TF21 947 aa11.14□□□□□ -0.63
RPAP1-211ENST00000568413 CC2D2BQ6DHV5 1058 aa11.14□□□□□ -0.63
RPAP1-211ENST00000568413 TMC4Q7Z404 712 aa11.14□□□□□ -0.63
RPAP1-211ENST00000568413 GRAPLQ8TC17 118 aaPredicted RBP11.14□□□□□ -0.63
RPAP1-211ENST00000568413 KAZALD1Q96I82 304 aa11.14□□□□□ -0.63
RPAP1-211ENST00000568413 CCDC85AQ96PX6 553 aaPredicted RBP11.14□□□□□ -0.63
RPAP1-211ENST00000568413 CDC5LQ99459 802 aaKnown RBP11.14□□□□□ -0.63
RPAP1-211ENST00000568413 TMX4Q9H1E5 349 aaPredicted RBP11.14□□□□□ -0.63
RPAP1-211ENST00000568413 BICC1Q9H694 974 aaKnown RBP11.14□□□□□ -0.63
RPAP1-211ENST00000568413 DDX19BQ9UMR2 479 aa11.14□□□□□ -0.63
RPAP1-211ENST00000568413 FER1L6Q2WGJ9 1857 aa11.14□□□□□ -0.63
RPAP1-211ENST00000568413 RTL9Q8NET4 1388 aa11.14□□□□□ -0.63
RPAP1-211ENST00000568413 LAMB2P55268 1798 aa11.13□□□□□ -0.63
RPAP1-211ENST00000568413 ANKRD18BA2A2Z9 1011 aa11.13□□□□□ -0.63
RPAP1-211ENST00000568413 IFIT5Q13325 482 aaKnown RBP11.13□□□□□ -0.63
RPAP1-211ENST00000568413 CCDC57Q2TAC2 916 aa11.13□□□□□ -0.63
RPAP1-211ENST00000568413 RABL6Q3YEC7 729 aaPredicted RBP11.13□□□□□ -0.63
RPAP1-211ENST00000568413 GRIPAP1Q4V328 841 aa11.13□□□□□ -0.63
RPAP1-211ENST00000568413 C20orf194Q5TEA3 1177 aa11.13□□□□□ -0.63
RPAP1-211ENST00000568413 ANKRD18AQ8IVF6 992 aa11.13□□□□□ -0.63
RPAP1-211ENST00000568413 GREM2Q9H772 168 aa11.13□□□□□ -0.63
RPAP1-211ENST00000568413 SEC31BQ9NQW1 1179 aa11.13□□□□□ -0.63
RPAP1-211ENST00000568413 COG6Q9Y2V7 657 aa11.13□□□□□ -0.63
RPAP1-211ENST00000568413 CHMP3Q9Y3E7 222 aa11.13□□□□□ -0.63
RPAP1-211ENST00000568413 SUPT16HQ9Y5B9 1047 aaKnown RBP11.13□□□□□ -0.63
RPAP1-211ENST00000568413 MYH3P11055 1940 aa11.13□□□□□ -0.63
RPAP1-211ENST00000568413 DICER1Q9UPY3 1922 aaKnown RBP11.13□□□□□ -0.63
RPAP1-211ENST00000568413 KDM2BQ8NHM5 1336 aa11.12□□□□□ -0.63
RPAP1-211ENST00000568413 PPEF1O14829 653 aaPredicted RBP11.12□□□□□ -0.63
RPAP1-211ENST00000568413 C21orf2O43822 256 aa11.12□□□□□ -0.63
RPAP1-211ENST00000568413 ITGA6P23229 1130 aa11.12□□□□□ -0.63
RPAP1-211ENST00000568413 APLP1P51693 650 aa11.12□□□□□ -0.63
RPAP1-211ENST00000568413 SP8Q8IXZ3 490 aa11.12□□□□□ -0.63
RPAP1-211ENST00000568413 C16orf71Q8IYS4 520 aaPredicted RBP11.12□□□□□ -0.63
RPAP1-211ENST00000568413 ANKRD44Q8N8A2 993 aa11.12□□□□□ -0.63
RPAP1-211ENST00000568413 RBM46Q8TBY0 533 aaKnown RBP11.12□□□□□ -0.63
RPAP1-211ENST00000568413 C7orf43Q8WVR3 580 aa11.12□□□□□ -0.63
RPAP1-211ENST00000568413 CELF1Q92879 486 aaKnown RBP11.12□□□□□ -0.63
RPAP1-211ENST00000568413 ATP6V0A2Q9Y487 856 aa11.12□□□□□ -0.63
RPAP1-211ENST00000568413 LRRFIP2Q9Y608 721 aaKnown RBP11.12□□□□□ -0.63
RPAP1-211ENST00000568413 LMNB1P20700 586 aa11.11□□□□□ -0.63
RPAP1-211ENST00000568413 IGHMBP2P38935 993 aaKnown RBP11.11□□□□□ -0.63
RPAP1-211ENST00000568413 FAM161AQ3B820 660 aa11.11□□□□□ -0.63
RPAP1-211ENST00000568413 TAF7LQ5H9L4 462 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms