RNA–Protein interactions for RNA: ENST00000567143.1

GINS3-206, Transcript of GINS complex subunit 3, humanhuman

Gene GINS3, Length 3,202 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-206ENST00000567143 ZC3H6P61129 1189 aaKnown RBP7.73□□□□□ -1.17
GINS3-206ENST00000567143 CUL4AQ13619 759 aa7.73□□□□□ -1.17
GINS3-206ENST00000567143 LUZP1Q86V48 1076 aa7.73□□□□□ -1.17
GINS3-206ENST00000567143 ERCC4Q92889 916 aaPredicted RBP7.73□□□□□ -1.17
GINS3-206ENST00000567143 PDRG1Q9NUG6 133 aa7.73□□□□□ -1.17
GINS3-206ENST00000567143 IBTKQ9P2D0 1353 aaPredicted RBP7.73□□□□□ -1.17
GINS3-206ENST00000567143 SGSM2O43147 1006 aa7.73□□□□□ -1.17
GINS3-206ENST00000567143 KDM4AO75164 1064 aa7.73□□□□□ -1.17
GINS3-206ENST00000567143 HSPA4P34932 840 aa7.73□□□□□ -1.17
GINS3-206ENST00000567143 MCM2P49736 904 aa7.73□□□□□ -1.17
GINS3-206ENST00000567143 NOLC1Q14978 699 aaKnown RBP eCLIP7.73□□□□□ -1.17
GINS3-206ENST00000567143 ZNF592Q92610 1267 aa7.73□□□□□ -1.17
GINS3-206ENST00000567143 OSBPL3Q9H4L5 887 aa7.73□□□□□ -1.17
GINS3-206ENST00000567143 TLR7Q9NYK1 1049 aaKnown RBP7.73□□□□□ -1.17
GINS3-206ENST00000567143 LIMCH1Q9UPQ0 1083 aa7.73□□□□□ -1.17
GINS3-206ENST00000567143 AP5Z1O43299 807 aa7.73□□□□□ -1.17
GINS3-206ENST00000567143 ZNF500O60304 480 aaPredicted RBP7.73□□□□□ -1.17
GINS3-206ENST00000567143 RAB11FIP3O75154 756 aa7.73□□□□□ -1.17
GINS3-206ENST00000567143 PHF14O94880 888 aa7.73□□□□□ -1.17
GINS3-206ENST00000567143 IL2RBP14784 551 aa7.73□□□□□ -1.17
GINS3-206ENST00000567143 FGD1P98174 961 aa7.73□□□□□ -1.17
GINS3-206ENST00000567143 SLFNL1Q499Z3 407 aa7.73□□□□□ -1.17
GINS3-206ENST00000567143 LARP1BQ659C4 914 aaKnown RBP7.73□□□□□ -1.17
GINS3-206ENST00000567143 FAM196AQ6ZSG2 479 aa7.73□□□□□ -1.17
GINS3-206ENST00000567143 CLASRPQ8N2M8 674 aaKnown RBP7.73□□□□□ -1.17
GINS3-206ENST00000567143 PI4K2BQ8TCG2 481 aa7.73□□□□□ -1.17
GINS3-206ENST00000567143 PYCARDQ9ULZ3 195 aa7.73□□□□□ -1.17
GINS3-206ENST00000567143 F13A1P00488 732 aa7.72□□□□□ -1.17
GINS3-206ENST00000567143 LRMPQ12912 555 aa7.72□□□□□ -1.17
GINS3-206ENST00000567143 SLC39A6Q13433 755 aa7.72□□□□□ -1.17
GINS3-206ENST00000567143 CCDC183Q5T5S1 534 aa7.72□□□□□ -1.17
GINS3-206ENST00000567143 CDC37L1Q7L3B6 337 aa7.72□□□□□ -1.17
GINS3-206ENST00000567143 KRT27Q7Z3Y8 459 aa7.72□□□□□ -1.17
GINS3-206ENST00000567143 DNAAF4Q8WXU2 420 aa7.72□□□□□ -1.17
GINS3-206ENST00000567143 UPF1Q92900 1129 aaKnown RBP eCLIP7.72□□□□□ -1.17
GINS3-206ENST00000567143 PLSCR1O15162 318 aa7.72□□□□□ -1.17
GINS3-206ENST00000567143 CHRNA2Q15822 529 aa7.72□□□□□ -1.17
GINS3-206ENST00000567143 ME3Q16798 604 aa7.72□□□□□ -1.17
GINS3-206ENST00000567143 ZNF530Q6P9A1 599 aaPredicted RBP7.72□□□□□ -1.17
GINS3-206ENST00000567143 SASS6Q6UVJ0 657 aa7.72□□□□□ -1.17
GINS3-206ENST00000567143 KIF1BPQ96EK5 621 aa7.72□□□□□ -1.17
GINS3-206ENST00000567143 FSD1Q9BTV5 496 aa7.72□□□□□ -1.17
GINS3-206ENST00000567143 MAP3K2Q9Y2U5 619 aa7.72□□□□□ -1.17
GINS3-206ENST00000567143 SALL3Q9BXA9 1300 aa7.72□□□□□ -1.17
GINS3-206ENST00000567143 TAF1LQ8IZX4 1826 aa7.71□□□□□ -1.17
GINS3-206ENST00000567143 BTBD11A6QL63 1104 aa7.71□□□□□ -1.17
GINS3-206ENST00000567143 NPHP1O15259 732 aa7.71□□□□□ -1.17
GINS3-206ENST00000567143 LIG1P18858 919 aa7.71□□□□□ -1.17
GINS3-206ENST00000567143 CSPP1Q1MSJ5 1256 aa7.71□□□□□ -1.17
GINS3-206ENST00000567143 NBPF6Q5VWK0 638 aa7.71□□□□□ -1.17
GINS3-206ENST00000567143 NBPF4Q96M43 638 aa7.71□□□□□ -1.17
GINS3-206ENST00000567143 C16orf45Q96MC5 204 aaPredicted RBP7.71□□□□□ -1.17
GINS3-206ENST00000567143 LSG1Q9H089 658 aaKnown RBP7.71□□□□□ -1.17
GINS3-206ENST00000567143 RAD50Q92878 1312 aa7.71□□□□□ -1.17
GINS3-206ENST00000567143 RPAP1Q9BWH6 1393 aaPredicted RBP7.71□□□□□ -1.18
GINS3-206ENST00000567143 HSP90B1P14625 803 aaKnown RBP7.71□□□□□ -1.18
GINS3-206ENST00000567143 PTGS1P23219 599 aa7.71□□□□□ -1.18
GINS3-206ENST00000567143 GUCY1B3Q02153 619 aa7.71□□□□□ -1.18
GINS3-206ENST00000567143 CCDC129Q6ZRS4 1044 aa7.71□□□□□ -1.18
GINS3-206ENST00000567143 DNAJC2Q99543 621 aaKnown RBP7.71□□□□□ -1.18
GINS3-206ENST00000567143 NRBP1Q9UHY1 535 aa7.71□□□□□ -1.18
GINS3-206ENST00000567143 CYP46A1Q9Y6A2 500 aa7.71□□□□□ -1.18
GINS3-206ENST00000567143 TCHHQ07283 1943 aa7.71□□□□□ -1.18
GINS3-206ENST00000567143 KDM3BQ7LBC6 1761 aa7.71□□□□□ -1.18
GINS3-206ENST00000567143 AMOTQ4VCS5 1084 aa7.71□□□□□ -1.18
GINS3-206ENST00000567143 BICD2Q8TD16 824 aa7.71□□□□□ -1.18
GINS3-206ENST00000567143 SSH3Q8TE77 659 aa7.71□□□□□ -1.18
GINS3-206ENST00000567143 INTS4Q96HW7 963 aaKnown RBP7.71□□□□□ -1.18
GINS3-206ENST00000567143 TPCN1Q9ULQ1 816 aa7.71□□□□□ -1.18
GINS3-206ENST00000567143 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.71□□□□□ -1.18
GINS3-206ENST00000567143 RBM8AQ9Y5S9 174 aaKnown RBP7.71□□□□□ -1.18
GINS3-206ENST00000567143 HTATSF1O43719 755 aaKnown RBP7.7□□□□□ -1.18
GINS3-206ENST00000567143 JAK2O60674 1132 aa7.7□□□□□ -1.18
GINS3-206ENST00000567143 ZKSCAN1P17029 563 aaPredicted RBP7.7□□□□□ -1.18
GINS3-206ENST00000567143 UBE2HP62256 183 aa7.7□□□□□ -1.18
GINS3-206ENST00000567143 NAA30Q147X3 362 aaPredicted RBP7.7□□□□□ -1.18
GINS3-206ENST00000567143 RAB11FIP4Q86YS3 637 aa7.7□□□□□ -1.18
GINS3-206ENST00000567143 SYTL4Q96C24 671 aaPredicted RBP7.7□□□□□ -1.18
GINS3-206ENST00000567143 FTOQ9C0B1 505 aaKnown RBP eCLIP7.7□□□□□ -1.18
GINS3-206ENST00000567143 DACT1Q9NYF0 836 aa7.7□□□□□ -1.18
GINS3-206ENST00000567143 PCDH11XQ9BZA7 1347 aa7.7□□□□□ -1.18
GINS3-206ENST00000567143 PCDH11YQ9BZA8 1340 aa7.7□□□□□ -1.18
GINS3-206ENST00000567143 DLG5Q8TDM6 1919 aa7.7□□□□□ -1.18
GINS3-206ENST00000567143 CEMIPQ8WUJ3 1361 aa7.7□□□□□ -1.18
GINS3-206ENST00000567143 EVA1CP58658 441 aa7.7□□□□□ -1.18
GINS3-206ENST00000567143 ANAPC15P60006 121 aa7.7□□□□□ -1.18
GINS3-206ENST00000567143 NMIQ13287 307 aaPredicted RBP7.7□□□□□ -1.18
GINS3-206ENST00000567143 TTC6Q86TZ1 520 aa7.7□□□□□ -1.18
GINS3-206ENST00000567143 ZBTB9Q96C00 473 aa7.7□□□□□ -1.18
GINS3-206ENST00000567143 HYPKQ9NX55 129 aa7.7□□□□□ -1.18
GINS3-206ENST00000567143 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.7□□□□□ -1.18
GINS3-206ENST00000567143 MTMR6Q9Y217 621 aa7.7□□□□□ -1.18
GINS3-206ENST00000567143 V9GYY5 206 aaPredicted RBP7.7□□□□□ -1.18
GINS3-206ENST00000567143 TJP1Q07157 1748 aa7.69□□□□□ -1.18
GINS3-206ENST00000567143 A0A0D9SFI3 127 aa7.69□□□□□ -1.18
GINS3-206ENST00000567143 PPP4R3BQ5MIZ7 849 aa7.69□□□□□ -1.18
GINS3-206ENST00000567143 CHST3Q7LGC8 479 aa7.69□□□□□ -1.18
GINS3-206ENST00000567143 SEC62Q99442 399 aaKnown RBP7.69□□□□□ -1.18
GINS3-206ENST00000567143 TRIM5Q9C035 493 aa7.69□□□□□ -1.18
GINS3-206ENST00000567143 ZNF330Q9Y3S2 320 aaPredicted RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms