RNA–Protein interactions for RNA: ENST00000566828.5

EDC3-212, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 4

Gene EDC3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-212ENST00000566828 CDHR2Q9BYE9 1310 aa21.3■■□□□ 1
EDC3-212ENST00000566828 RAD17O75943 681 aa21.3■■□□□ 1
EDC3-212ENST00000566828 EIF2S2P20042 333 aaKnown RBP21.3■■□□□ 1
EDC3-212ENST00000566828 MLLT1Q03111 559 aaPredicted RBP21.3■■□□□ 1
EDC3-212ENST00000566828 PDIA6Q15084 440 aa21.3■■□□□ 1
EDC3-212ENST00000566828 CIAPIN1Q6FI81 312 aa21.3■■□□□ 1
EDC3-212ENST00000566828 TRPM4Q8TD43 1214 aa21.3■■□□□ 1
EDC3-212ENST00000566828 BCL2L13Q9BXK5 485 aa21.3■■□□□ 1
EDC3-212ENST00000566828 SHTN1A0MZ66 631 aa21.29■■□□□ 1
EDC3-212ENST00000566828 KIAA2012Q0VF49 1180 aa21.29■■□□□ 1
EDC3-212ENST00000566828 SLC10A5Q5PT55 438 aa21.29■■□□□ 1
EDC3-212ENST00000566828 COL4A1P02462 1669 aa21.28■■□□□ 1
EDC3-212ENST00000566828 HCLS1P14317 486 aaPredicted RBP21.28■■□□□ 1
EDC3-212ENST00000566828 MPNDQ8N594 471 aa21.28■■□□□ 1
EDC3-212ENST00000566828 CFAP44Q96MT7 982 aa21.28■■□□□ 1
EDC3-212ENST00000566828 HIRAP54198 1017 aaPredicted RBP21.27■■□□□ 1
EDC3-212ENST00000566828 BRPF1P55201 1214 aaPredicted RBP21.27■■□□□ 1
EDC3-212ENST00000566828 SP8Q8IXZ3 490 aa21.27■■□□□ 1
EDC3-212ENST00000566828 HHIPL1Q96JK4 782 aa21.27■■□□□ 1
EDC3-212ENST00000566828 MCOLN1Q9GZU1 580 aa21.27■■□□□ 1
EDC3-212ENST00000566828 YDJCA8MPS7 323 aa21.26■□□□□ 0.99
EDC3-212ENST00000566828 CA12O43570 354 aa21.26■□□□□ 0.99
EDC3-212ENST00000566828 NECTIN2Q92692 538 aa21.26■□□□□ 0.99
EDC3-212ENST00000566828 PGAP2Q9UHJ9 254 aa21.26■□□□□ 0.99
EDC3-212ENST00000566828 POLR2AP24928 1970 aaKnown RBP21.26■□□□□ 0.99
EDC3-212ENST00000566828 BBOX1O75936 387 aa21.25■□□□□ 0.99
EDC3-212ENST00000566828 AIMP1Q12904 312 aaKnown RBP21.25■□□□□ 0.99
EDC3-212ENST00000566828 GRAPQ13588 217 aa21.25■□□□□ 0.99
EDC3-212ENST00000566828 TNIP1Q15025 636 aa21.25■□□□□ 0.99
EDC3-212ENST00000566828 DDX46Q7L014 1031 aaKnown RBP21.25■□□□□ 0.99
EDC3-212ENST00000566828 NLRP10Q86W26 655 aa21.25■□□□□ 0.99
EDC3-212ENST00000566828 GRAPLQ8TC17 118 aaPredicted RBP21.25■□□□□ 0.99
EDC3-212ENST00000566828 ZNF428Q96B54 188 aa21.25■□□□□ 0.99
EDC3-212ENST00000566828 RGS19P49795 217 aa21.24■□□□□ 0.99
EDC3-212ENST00000566828 CDC37L1Q7L3B6 337 aa21.24■□□□□ 0.99
EDC3-212ENST00000566828 MICALL2Q8IY33 904 aa21.24■□□□□ 0.99
EDC3-212ENST00000566828 ZC3H15Q8WU90 426 aaKnown RBP21.24■□□□□ 0.99
EDC3-212ENST00000566828 SH3TC1Q8TE82 1336 aa21.24■□□□□ 0.99
EDC3-212ENST00000566828 HSP90AB3PQ58FF7 597 aa21.23■□□□□ 0.99
EDC3-212ENST00000566828 COPS6Q7L5N1 327 aa21.23■□□□□ 0.99
EDC3-212ENST00000566828 XAGE3Q8WTP9 111 aa21.23■□□□□ 0.99
EDC3-212ENST00000566828 ZIC5Q96T25 663 aa21.23■□□□□ 0.99
EDC3-212ENST00000566828 TRMT112Q9UI30 125 aaKnown RBP21.23■□□□□ 0.99
EDC3-212ENST00000566828 CNOT7Q9UIV1 285 aaKnown RBP21.23■□□□□ 0.99
EDC3-212ENST00000566828 DGKZQ13574 1117 aa21.22■□□□□ 0.99
EDC3-212ENST00000566828 DLK2Q6UY11 383 aa21.22■□□□□ 0.99
EDC3-212ENST00000566828 ZBTB12Q9Y330 459 aaPredicted RBP21.22■□□□□ 0.99
EDC3-212ENST00000566828 SCN9AQ15858 1988 aa21.22■□□□□ 0.99
EDC3-212ENST00000566828 AKAP11Q9UKA4 1901 aa21.21■□□□□ 0.99
EDC3-212ENST00000566828 HUNKP57058 714 aa21.21■□□□□ 0.99
EDC3-212ENST00000566828 USP48Q86UV5 1035 aa21.21■□□□□ 0.99
EDC3-212ENST00000566828 PNNQ9H307 717 aaKnown RBP21.21■□□□□ 0.99
EDC3-212ENST00000566828 H7C1D1 291 aa21.2■□□□□ 0.98
EDC3-212ENST00000566828 NOGQ13253 232 aa21.2■□□□□ 0.98
EDC3-212ENST00000566828 TCIRG1Q13488 830 aa21.2■□□□□ 0.98
EDC3-212ENST00000566828 SAMD7Q7Z3H4 446 aa21.2■□□□□ 0.98
EDC3-212ENST00000566828 DBNDD1Q9H9R9 158 aa21.2■□□□□ 0.98
EDC3-212ENST00000566828 PSMD14O00487 310 aa21.19■□□□□ 0.98
EDC3-212ENST00000566828 EGFRP00533 1210 aa21.19■□□□□ 0.98
EDC3-212ENST00000566828 RIPK4P57078 832 aa21.19■□□□□ 0.98
EDC3-212ENST00000566828 PSME4Q14997 1843 aa21.19■□□□□ 0.98
EDC3-212ENST00000566828 KRT24Q2M2I5 525 aa21.18■□□□□ 0.98
EDC3-212ENST00000566828 TBC1D10BQ4KMP7 808 aaPredicted RBP21.18■□□□□ 0.98
EDC3-212ENST00000566828 TMC4Q7Z404 712 aa21.18■□□□□ 0.98
EDC3-212ENST00000566828 TNRC18O15417 2968 aaPredicted RBP21.17■□□□□ 0.98
EDC3-212ENST00000566828 ADM5C9JUS6 153 aa21.17■□□□□ 0.98
EDC3-212ENST00000566828 RTL9Q8NET4 1388 aa21.16■□□□□ 0.98
EDC3-212ENST00000566828 RIMBP2O15034 1052 aa21.16■□□□□ 0.98
EDC3-212ENST00000566828 WASHC4Q2M389 1173 aa21.16■□□□□ 0.98
EDC3-212ENST00000566828 KRT26Q7Z3Y9 468 aa21.16■□□□□ 0.98
EDC3-212ENST00000566828 CELF1Q92879 486 aaKnown RBP21.16■□□□□ 0.98
EDC3-212ENST00000566828 CHPF2Q9P2E5 772 aa21.16■□□□□ 0.98
EDC3-212ENST00000566828 NSFL1CQ9UNZ2 370 aaKnown RBP21.16■□□□□ 0.98
EDC3-212ENST00000566828 FAM155AB1AL88 458 aaPredicted RBP21.15■□□□□ 0.98
EDC3-212ENST00000566828 RGMBQ6NW40 437 aa21.15■□□□□ 0.98
EDC3-212ENST00000566828 DPF2Q92785 391 aa21.15■□□□□ 0.98
EDC3-212ENST00000566828 BABAM1Q9NWV8 329 aa21.15■□□□□ 0.98
EDC3-212ENST00000566828 ECE2O60344 883 aa21.14■□□□□ 0.97
EDC3-212ENST00000566828 TMPOP42166 694 aaKnown RBP21.14■□□□□ 0.97
EDC3-212ENST00000566828 LMOD3Q0VAK6 560 aa21.14■□□□□ 0.97
EDC3-212ENST00000566828 GBA2Q9HCG7 927 aaPredicted RBP21.14■□□□□ 0.97
EDC3-212ENST00000566828 C6orf229H3BNL8 230 aa21.13■□□□□ 0.97
EDC3-212ENST00000566828 GPSM2P81274 684 aa21.13■□□□□ 0.97
EDC3-212ENST00000566828 RBM26Q5T8P6 1007 aaKnown RBP21.13■□□□□ 0.97
EDC3-212ENST00000566828 FAM89AQ96GI7 184 aa21.13■□□□□ 0.97
EDC3-212ENST00000566828 POLLQ9UGP5 575 aa21.13■□□□□ 0.97
EDC3-212ENST00000566828 SPEF2Q9C093 1822 aa21.13■□□□□ 0.97
EDC3-212ENST00000566828 DOK7Q18PE1 504 aa21.12■□□□□ 0.97
EDC3-212ENST00000566828 RTL5Q5HYW3 569 aaPredicted RBP21.12■□□□□ 0.97
EDC3-212ENST00000566828 KCNQ5Q9NR82 932 aa21.12■□□□□ 0.97
EDC3-212ENST00000566828 ATP5J2-PTCD1G3V325 749 aa21.11■□□□□ 0.97
EDC3-212ENST00000566828 RPS12P25398 132 aaKnown RBP21.11■□□□□ 0.97
EDC3-212ENST00000566828 KIF4BQ2VIQ3 1234 aa21.11■□□□□ 0.97
EDC3-212ENST00000566828 C2orf69Q8N8R5 385 aa21.11■□□□□ 0.97
EDC3-212ENST00000566828 PLBD2Q8NHP8 589 aa21.11■□□□□ 0.97
EDC3-212ENST00000566828 DCPSQ96C86 337 aaKnown RBP21.11■□□□□ 0.97
EDC3-212ENST00000566828 GGA3Q9NZ52 723 aa21.11■□□□□ 0.97
EDC3-212ENST00000566828 PAPPA2Q9BXP8 1791 aa21.1■□□□□ 0.97
EDC3-212ENST00000566828 ZNF157P51786 506 aaPredicted RBP21.1■□□□□ 0.97
EDC3-212ENST00000566828 KIF23Q02241 960 aaPredicted RBP21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms