RNA–Protein interactions for RNA: ENST00000566466.1

SMPD3-207, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-207ENST00000566466 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.64□□□□□ -0.55
SMPD3-207ENST00000566466 NLGN2Q8NFZ4 835 aa11.64□□□□□ -0.55
SMPD3-207ENST00000566466 TTLL11Q8NHH1 800 aa11.64□□□□□ -0.55
SMPD3-207ENST00000566466 NYXQ9GZU5 481 aa11.64□□□□□ -0.55
SMPD3-207ENST00000566466 BICC1Q9H694 974 aaKnown RBP11.64□□□□□ -0.55
SMPD3-207ENST00000566466 C1orf115Q9H7X2 142 aa11.64□□□□□ -0.55
SMPD3-207ENST00000566466 LRRFIP2Q9Y608 721 aaKnown RBP11.64□□□□□ -0.55
SMPD3-207ENST00000566466 RTL9Q8NET4 1388 aa11.64□□□□□ -0.55
SMPD3-207ENST00000566466 PDE8AO60658 829 aa11.63□□□□□ -0.55
SMPD3-207ENST00000566466 MTX1Q13505 466 aa11.63□□□□□ -0.55
SMPD3-207ENST00000566466 BRIP1Q9BX63 1249 aa11.63□□□□□ -0.55
SMPD3-207ENST00000566466 DDX19BQ9UMR2 479 aa11.63□□□□□ -0.55
SMPD3-207ENST00000566466 SRGNP10124 158 aa11.62□□□□□ -0.55
SMPD3-207ENST00000566466 MS4A1P11836 297 aa11.62□□□□□ -0.55
SMPD3-207ENST00000566466 POLD1P28340 1107 aa11.62□□□□□ -0.55
SMPD3-207ENST00000566466 CHRNA5P30532 468 aa11.62□□□□□ -0.55
SMPD3-207ENST00000566466 FAM161AQ3B820 660 aa11.62□□□□□ -0.55
SMPD3-207ENST00000566466 SEC31BQ9NQW1 1179 aa11.62□□□□□ -0.55
SMPD3-207ENST00000566466 C9orf78Q9NZ63 289 aaPredicted RBP11.62□□□□□ -0.55
SMPD3-207ENST00000566466 PCDHB15Q9Y5E8 787 aa11.62□□□□□ -0.55
SMPD3-207ENST00000566466 LRRC37AA6NMS7 1700 aa11.62□□□□□ -0.55
SMPD3-207ENST00000566466 MYH3P11055 1940 aa11.62□□□□□ -0.55
SMPD3-207ENST00000566466 PNMA6EA0A0J9YXQ4 647 aa11.61□□□□□ -0.55
SMPD3-207ENST00000566466 UBTFL1P0CB47 393 aaPredicted RBP11.61□□□□□ -0.55
SMPD3-207ENST00000566466 HOXA10P31260 410 aaPredicted RBP11.61□□□□□ -0.55
SMPD3-207ENST00000566466 CEP85Q6P2H3 762 aa11.61□□□□□ -0.55
SMPD3-207ENST00000566466 FHDC1Q9C0D6 1143 aaPredicted RBP11.61□□□□□ -0.55
SMPD3-207ENST00000566466 GREM2Q9H772 168 aa11.61□□□□□ -0.55
SMPD3-207ENST00000566466 TAF1P21675 1872 aa11.61□□□□□ -0.55
SMPD3-207ENST00000566466 LTBP1Q14766 1721 aa11.6□□□□□ -0.55
SMPD3-207ENST00000566466 GNAI3P08754 354 aa11.6□□□□□ -0.55
SMPD3-207ENST00000566466 DPEP1P16444 411 aa11.6□□□□□ -0.55
SMPD3-207ENST00000566466 ST5P78524 1137 aa11.6□□□□□ -0.55
SMPD3-207ENST00000566466 POLA2Q14181 598 aa11.6□□□□□ -0.55
SMPD3-207ENST00000566466 LMBR1LQ6UX01 489 aa11.6□□□□□ -0.55
SMPD3-207ENST00000566466 CELF1Q92879 486 aaKnown RBP11.6□□□□□ -0.55
SMPD3-207ENST00000566466 CCDC85AQ96PX6 553 aaPredicted RBP11.6□□□□□ -0.55
SMPD3-207ENST00000566466 CD2APQ9Y5K6 639 aa11.6□□□□□ -0.55
SMPD3-207ENST00000566466 DUOX1Q9NRD9 1551 aa11.59□□□□□ -0.55
SMPD3-207ENST00000566466 A0A0G2JLW4 131 aa11.59□□□□□ -0.55
SMPD3-207ENST00000566466 GNAI2P04899 355 aa11.59□□□□□ -0.55
SMPD3-207ENST00000566466 RNF39Q9H2S5 420 aa11.59□□□□□ -0.55
SMPD3-207ENST00000566466 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.59□□□□□ -0.55
SMPD3-207ENST00000566466 A0A1B0GUL6 1792 aa11.59□□□□□ -0.55
SMPD3-207ENST00000566466 SLX4Q8IY92 1834 aa11.58□□□□□ -0.56
SMPD3-207ENST00000566466 PTPN12Q05209 780 aaKnown RBP11.58□□□□□ -0.56
SMPD3-207ENST00000566466 C2CD5Q86YS7 1000 aa11.58□□□□□ -0.56
SMPD3-207ENST00000566466 KLHDC4Q8TBB5 520 aa11.58□□□□□ -0.56
SMPD3-207ENST00000566466 SSH3Q8TE77 659 aa11.58□□□□□ -0.56
SMPD3-207ENST00000566466 C7orf43Q8WVR3 580 aa11.58□□□□□ -0.56
SMPD3-207ENST00000566466 NLRP3Q96P20 1036 aa11.58□□□□□ -0.56
SMPD3-207ENST00000566466 SYT17Q9BSW7 474 aa11.58□□□□□ -0.56
SMPD3-207ENST00000566466 ITGA6P23229 1130 aa11.57□□□□□ -0.56
SMPD3-207ENST00000566466 GTF2E1P29083 439 aaPredicted RBP11.57□□□□□ -0.56
SMPD3-207ENST00000566466 PDE6BP35913 854 aa11.57□□□□□ -0.56
SMPD3-207ENST00000566466 TGFB2P61812 414 aa11.57□□□□□ -0.56
SMPD3-207ENST00000566466 ATP8B2P98198 1209 aa11.57□□□□□ -0.56
SMPD3-207ENST00000566466 STYK1Q6J9G0 422 aa11.57□□□□□ -0.56
SMPD3-207ENST00000566466 OLFM4Q6UX06 510 aa11.57□□□□□ -0.56
SMPD3-207ENST00000566466 ZNF594Q96JF6 807 aaPredicted RBP11.57□□□□□ -0.56
SMPD3-207ENST00000566466 CRAMP1Q96RY5 1269 aa11.57□□□□□ -0.56
SMPD3-207ENST00000566466 PA2G4Q9UQ80 394 aaKnown RBP11.57□□□□□ -0.56
SMPD3-207ENST00000566466 NPR1P16066 1061 aa11.56□□□□□ -0.56
SMPD3-207ENST00000566466 ATG9AQ7Z3C6 839 aa11.56□□□□□ -0.56
SMPD3-207ENST00000566466 MASTLQ96GX5 879 aa11.56□□□□□ -0.56
SMPD3-207ENST00000566466 PUS3Q9BZE2 481 aaKnown RBP11.56□□□□□ -0.56
SMPD3-207ENST00000566466 SPEF2Q9C093 1822 aa11.56□□□□□ -0.56
SMPD3-207ENST00000566466 WTIPA6NIX2 430 aaPredicted RBP11.55□□□□□ -0.56
SMPD3-207ENST00000566466 GRAPQ13588 217 aa11.55□□□□□ -0.56
SMPD3-207ENST00000566466 CCDC152Q4G0S7 254 aa11.55□□□□□ -0.56
SMPD3-207ENST00000566466 GRAPLQ8TC17 118 aaPredicted RBP11.55□□□□□ -0.56
SMPD3-207ENST00000566466 COPRSQ9NQ92 184 aa11.55□□□□□ -0.56
SMPD3-207ENST00000566466 IRS2Q9Y4H2 1338 aa11.55□□□□□ -0.56
SMPD3-207ENST00000566466 SRGAP3O43295 1099 aa11.54□□□□□ -0.56
SMPD3-207ENST00000566466 IGHDP01880 384 aa11.54□□□□□ -0.56
SMPD3-207ENST00000566466 LRRC24Q50LG9 513 aa11.54□□□□□ -0.56
SMPD3-207ENST00000566466 PRPF40BQ6NWY9 871 aaKnown RBP11.54□□□□□ -0.56
SMPD3-207ENST00000566466 VGLL2Q8N8G2 317 aa11.54□□□□□ -0.56
SMPD3-207ENST00000566466 ZNF219Q9P2Y4 722 aaPredicted RBP11.54□□□□□ -0.56
SMPD3-207ENST00000566466 CACNA1SQ13698 1873 aa11.54□□□□□ -0.56
SMPD3-207ENST00000566466 GOLGB1Q14789 3259 aaKnown RBP11.54□□□□□ -0.56
SMPD3-207ENST00000566466 COL4A5P29400 1685 aa11.53□□□□□ -0.56
SMPD3-207ENST00000566466 H0YIN7 160 aa11.53□□□□□ -0.56
SMPD3-207ENST00000566466 NPHP1O15259 732 aa11.53□□□□□ -0.56
SMPD3-207ENST00000566466 YBX3P16989 372 aaKnown RBP eCLIP11.53□□□□□ -0.56
SMPD3-207ENST00000566466 PRELPP51888 382 aa11.53□□□□□ -0.56
SMPD3-207ENST00000566466 RPAP2Q8IXW5 612 aaPredicted RBP11.53□□□□□ -0.56
SMPD3-207ENST00000566466 PPP1R1BQ9UD71 204 aaPredicted RBP11.53□□□□□ -0.56
SMPD3-207ENST00000566466 WWC3Q9ULE0 1092 aa11.53□□□□□ -0.56
SMPD3-207ENST00000566466 PDZRN3Q9UPQ7 1066 aa11.53□□□□□ -0.56
SMPD3-207ENST00000566466 NOP58Q9Y2X3 529 aaKnown RBP11.53□□□□□ -0.56
SMPD3-207ENST00000566466 RIPOR2Q9Y4F9 1068 aa11.53□□□□□ -0.56
SMPD3-207ENST00000566466 ARFGEF1Q9Y6D6 1849 aa11.53□□□□□ -0.56
SMPD3-207ENST00000566466 SNAP23O00161 211 aa11.52□□□□□ -0.57
SMPD3-207ENST00000566466 PPEF1O14829 653 aaPredicted RBP11.52□□□□□ -0.57
SMPD3-207ENST00000566466 SASH1O94885 1247 aa11.52□□□□□ -0.57
SMPD3-207ENST00000566466 RPS8P62241 208 aaKnown RBP11.52□□□□□ -0.57
SMPD3-207ENST00000566466 IFIT5Q13325 482 aaKnown RBP11.52□□□□□ -0.57
SMPD3-207ENST00000566466 HDAC1Q13547 482 aaPredicted RBP11.52□□□□□ -0.57
SMPD3-207ENST00000566466 KLHL34Q8N239 644 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms