RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 KIAA2012Q0VF49 1180 aa16.86■□□□□ 0.29
RNF40-208ENST00000565995 UTP14AQ9BVJ6 771 aaKnown RBP16.86■□□□□ 0.29
RNF40-208ENST00000565995 BABAM1Q9NWV8 329 aa16.86■□□□□ 0.29
RNF40-208ENST00000565995 PDE4DIPQ5VU43 2346 aa16.86■□□□□ 0.29
RNF40-208ENST00000565995 TCERG1O14776 1098 aaKnown RBP16.85■□□□□ 0.29
RNF40-208ENST00000565995 CELF2O95319 508 aaKnown RBP16.85■□□□□ 0.29
RNF40-208ENST00000565995 GMPSP49915 693 aaPredicted RBP16.85■□□□□ 0.29
RNF40-208ENST00000565995 HIRAP54198 1017 aaPredicted RBP16.85■□□□□ 0.29
RNF40-208ENST00000565995 CIAPIN1Q6FI81 312 aa16.85■□□□□ 0.29
RNF40-208ENST00000565995 PAXIP1Q6ZW49 1069 aaPredicted RBP16.85■□□□□ 0.29
RNF40-208ENST00000565995 SCN9AQ15858 1988 aa16.84■□□□□ 0.29
RNF40-208ENST00000565995 TNIP1Q15025 636 aa16.84■□□□□ 0.29
RNF40-208ENST00000565995 MPNDQ8N594 471 aa16.84■□□□□ 0.29
RNF40-208ENST00000565995 GLIS2Q9BZE0 524 aaPredicted RBP16.84■□□□□ 0.29
RNF40-208ENST00000565995 PNNQ9H307 717 aaKnown RBP16.84■□□□□ 0.29
RNF40-208ENST00000565995 CCDC85CA6NKD9 419 aa16.83■□□□□ 0.28
RNF40-208ENST00000565995 DPP8Q6V1X1 898 aaPredicted RBP16.83■□□□□ 0.28
RNF40-208ENST00000565995 CDC37L1Q7L3B6 337 aa16.83■□□□□ 0.28
RNF40-208ENST00000565995 TMC4Q7Z404 712 aa16.83■□□□□ 0.28
RNF40-208ENST00000565995 THUMPD2Q9BTF0 503 aaKnown RBP16.83■□□□□ 0.28
RNF40-208ENST00000565995 GRM1Q13255 1194 aa16.82■□□□□ 0.28
RNF40-208ENST00000565995 HSP90AB3PQ58FF7 597 aa16.82■□□□□ 0.28
RNF40-208ENST00000565995 NLRP10Q86W26 655 aa16.82■□□□□ 0.28
RNF40-208ENST00000565995 YDJCA8MPS7 323 aa16.81■□□□□ 0.28
RNF40-208ENST00000565995 DPF2Q92785 391 aa16.81■□□□□ 0.28
RNF40-208ENST00000565995 MCOLN1Q9GZU1 580 aa16.81■□□□□ 0.28
RNF40-208ENST00000565995 CNOT7Q9UIV1 285 aaKnown RBP16.81■□□□□ 0.28
RNF40-208ENST00000565995 TSKSQ9UJT2 592 aa16.81■□□□□ 0.28
RNF40-208ENST00000565995 NOGQ13253 232 aa16.8■□□□□ 0.28
RNF40-208ENST00000565995 TCIRG1Q13488 830 aa16.8■□□□□ 0.28
RNF40-208ENST00000565995 GRAPQ13588 217 aa16.8■□□□□ 0.28
RNF40-208ENST00000565995 PROSER3Q2NL68 480 aa16.8■□□□□ 0.28
RNF40-208ENST00000565995 GRAPLQ8TC17 118 aaPredicted RBP16.8■□□□□ 0.28
RNF40-208ENST00000565995 BCL2L13Q9BXK5 485 aa16.8■□□□□ 0.28
RNF40-208ENST00000565995 TSPYL4Q9UJ04 414 aa16.8■□□□□ 0.28
RNF40-208ENST00000565995 H7C1D1 291 aa16.79■□□□□ 0.28
RNF40-208ENST00000565995 RAD17O75943 681 aa16.79■□□□□ 0.28
RNF40-208ENST00000565995 DDX46Q7L014 1031 aaKnown RBP16.79■□□□□ 0.28
RNF40-208ENST00000565995 TRPM4Q8TD43 1214 aa16.79■□□□□ 0.28
RNF40-208ENST00000565995 HCLS1P14317 486 aaPredicted RBP16.78■□□□□ 0.28
RNF40-208ENST00000565995 EIF2S2P20042 333 aaKnown RBP16.78■□□□□ 0.28
RNF40-208ENST00000565995 COPS6Q7L5N1 327 aa16.78■□□□□ 0.28
RNF40-208ENST00000565995 SH3TC1Q8TE82 1336 aa16.77■□□□□ 0.28
RNF40-208ENST00000565995 MAPK8IP3Q9UPT6 1336 aa16.77■□□□□ 0.28
RNF40-208ENST00000565995 TRMT112Q9UI30 125 aaKnown RBP16.77■□□□□ 0.28
RNF40-208ENST00000565995 COL4A1P02462 1669 aa16.76■□□□□ 0.27
RNF40-208ENST00000565995 SHTN1A0MZ66 631 aa16.76■□□□□ 0.27
RNF40-208ENST00000565995 FAM155AB1AL88 458 aaPredicted RBP16.76■□□□□ 0.27
RNF40-208ENST00000565995 ANXA1P04083 346 aa16.76■□□□□ 0.27
RNF40-208ENST00000565995 USP48Q86UV5 1035 aa16.76■□□□□ 0.27
RNF40-208ENST00000565995 MICALL2Q8IY33 904 aa16.76■□□□□ 0.27
RNF40-208ENST00000565995 ZIC5Q96T25 663 aa16.76■□□□□ 0.27
RNF40-208ENST00000565995 SAGE1Q9NXZ1 904 aa16.76■□□□□ 0.27
RNF40-208ENST00000565995 PCDH10Q9P2E7 1040 aa16.76■□□□□ 0.27
RNF40-208ENST00000565995 MYH3P11055 1940 aa16.76■□□□□ 0.27
RNF40-208ENST00000565995 RPS12P25398 132 aaKnown RBP16.75■□□□□ 0.27
RNF40-208ENST00000565995 HUNKP57058 714 aa16.75■□□□□ 0.27
RNF40-208ENST00000565995 RIPK4P57078 832 aa16.75■□□□□ 0.27
RNF40-208ENST00000565995 DGKZQ13574 1117 aa16.75■□□□□ 0.27
RNF40-208ENST00000565995 SF3B3Q15393 1217 aaKnown RBP16.75■□□□□ 0.27
RNF40-208ENST00000565995 XAGE3Q8WTP9 111 aa16.75■□□□□ 0.27
RNF40-208ENST00000565995 ZNF646O15015 1829 aaPredicted RBP16.75■□□□□ 0.27
RNF40-208ENST00000565995 PSMD14O00487 310 aa16.74■□□□□ 0.27
RNF40-208ENST00000565995 WASHC4Q2M389 1173 aa16.74■□□□□ 0.27
RNF40-208ENST00000565995 RGMBQ6NW40 437 aa16.74■□□□□ 0.27
RNF40-208ENST00000565995 ZNF408Q9H9D4 720 aa16.74■□□□□ 0.27
RNF40-208ENST00000565995 SAMD7Q7Z3H4 446 aa16.73■□□□□ 0.27
RNF40-208ENST00000565995 CCDC102AQ96A19 550 aa16.73■□□□□ 0.27
RNF40-208ENST00000565995 ISCA1Q9BUE6 129 aa16.73■□□□□ 0.27
RNF40-208ENST00000565995 ZBTB12Q9Y330 459 aaPredicted RBP16.73■□□□□ 0.27
RNF40-208ENST00000565995 ZNF609O15014 1411 aa16.72■□□□□ 0.27
RNF40-208ENST00000565995 CHL1O00533 1208 aa16.72■□□□□ 0.27
RNF40-208ENST00000565995 TMPOP42166 694 aaKnown RBP16.72■□□□□ 0.27
RNF40-208ENST00000565995 LMOD3Q0VAK6 560 aa16.72■□□□□ 0.27
RNF40-208ENST00000565995 AIMP1Q12904 312 aaKnown RBP16.72■□□□□ 0.27
RNF40-208ENST00000565995 PLBD2Q8NHP8 589 aa16.72■□□□□ 0.27
RNF40-208ENST00000565995 GBA2Q9HCG7 927 aaPredicted RBP16.72■□□□□ 0.27
RNF40-208ENST00000565995 POLLQ9UGP5 575 aa16.72■□□□□ 0.27
RNF40-208ENST00000565995 EGFRP00533 1210 aa16.71■□□□□ 0.27
RNF40-208ENST00000565995 TRIM28Q13263 835 aaKnown RBP16.71■□□□□ 0.27
RNF40-208ENST00000565995 DLK2Q6UY11 383 aa16.71■□□□□ 0.27
RNF40-208ENST00000565995 KRT26Q7Z3Y9 468 aa16.71■□□□□ 0.27
RNF40-208ENST00000565995 C2orf69Q8N8R5 385 aa16.71■□□□□ 0.27
RNF40-208ENST00000565995 CELF1Q92879 486 aaKnown RBP16.71■□□□□ 0.27
RNF40-208ENST00000565995 NSFL1CQ9UNZ2 370 aaKnown RBP16.71■□□□□ 0.27
RNF40-208ENST00000565995 RTL9Q8NET4 1388 aa16.71■□□□□ 0.27
RNF40-208ENST00000565995 VIL1P09327 827 aaKnown RBP16.7■□□□□ 0.26
RNF40-208ENST00000565995 HOXB7P09629 217 aa16.7■□□□□ 0.26
RNF40-208ENST00000565995 ZEB1P37275 1124 aaPredicted RBP16.7■□□□□ 0.26
RNF40-208ENST00000565995 ANKRD13DQ6ZTN6 518 aa16.7■□□□□ 0.26
RNF40-208ENST00000565995 DCPSQ96C86 337 aaKnown RBP16.7■□□□□ 0.26
RNF40-208ENST00000565995 DBNDD1Q9H9R9 158 aa16.7■□□□□ 0.26
RNF40-208ENST00000565995 LAMB1P07942 1786 aa16.69■□□□□ 0.26
RNF40-208ENST00000565995 PAPPA2Q9BXP8 1791 aa16.69■□□□□ 0.26
RNF40-208ENST00000565995 ECE2O60344 883 aa16.69■□□□□ 0.26
RNF40-208ENST00000565995 GPSM2P81274 684 aa16.69■□□□□ 0.26
RNF40-208ENST00000565995 KIF23Q02241 960 aaPredicted RBP16.69■□□□□ 0.26
RNF40-208ENST00000565995 TBC1D10BQ4KMP7 808 aaPredicted RBP16.69■□□□□ 0.26
RNF40-208ENST00000565995 REM2Q8IYK8 340 aaPredicted RBP16.69■□□□□ 0.26
RNF40-208ENST00000565995 EYA3Q99504 573 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms