RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 ARFGEF2Q9Y6D5 1785 aa9.68□□□□□ -0.86
CDH1-208ENST00000565810 ITGA6P23229 1130 aa9.68□□□□□ -0.86
CDH1-208ENST00000565810 IGHMBP2P38935 993 aaKnown RBP9.68□□□□□ -0.86
CDH1-208ENST00000565810 FAM161AQ3B820 660 aa9.68□□□□□ -0.86
CDH1-208ENST00000565810 CCDC136Q96JN2 1154 aa9.68□□□□□ -0.86
CDH1-208ENST00000565810 GREM2Q9H772 168 aa9.68□□□□□ -0.86
CDH1-208ENST00000565810 C4AP0C0L4 1744 aa9.68□□□□□ -0.86
CDH1-208ENST00000565810 PNMA6EA0A0J9YXQ4 647 aa9.67□□□□□ -0.86
CDH1-208ENST00000565810 KLRG2A4D1S0 409 aaPredicted RBP9.67□□□□□ -0.86
CDH1-208ENST00000565810 NPR1P16066 1061 aa9.67□□□□□ -0.86
CDH1-208ENST00000565810 ALDH1B1P30837 517 aa9.67□□□□□ -0.86
CDH1-208ENST00000565810 PTGER2P43116 358 aa9.67□□□□□ -0.86
CDH1-208ENST00000565810 TGFB2P61812 414 aa9.67□□□□□ -0.86
CDH1-208ENST00000565810 G3BP1Q13283 466 aaKnown RBP eCLIP9.67□□□□□ -0.86
CDH1-208ENST00000565810 HDAC1Q13547 482 aaPredicted RBP9.67□□□□□ -0.86
CDH1-208ENST00000565810 HSP90AB4PQ58FF6 505 aa9.67□□□□□ -0.86
CDH1-208ENST00000565810 C2CD5Q86YS7 1000 aa9.67□□□□□ -0.86
CDH1-208ENST00000565810 ANKRD18AQ8IVF6 992 aa9.67□□□□□ -0.86
CDH1-208ENST00000565810 KLHL34Q8N239 644 aa9.67□□□□□ -0.86
CDH1-208ENST00000565810 SSH3Q8TE77 659 aa9.67□□□□□ -0.86
CDH1-208ENST00000565810 MASTLQ96GX5 879 aa9.67□□□□□ -0.86
CDH1-208ENST00000565810 MPHOSPH8Q99549 860 aa9.67□□□□□ -0.86
CDH1-208ENST00000565810 SGIP1Q9BQI5 828 aa9.67□□□□□ -0.86
CDH1-208ENST00000565810 TMX4Q9H1E5 349 aaPredicted RBP9.67□□□□□ -0.86
CDH1-208ENST00000565810 ZBTB47Q9UFB7 747 aaPredicted RBP9.67□□□□□ -0.86
CDH1-208ENST00000565810 CD2APQ9Y5K6 639 aa9.67□□□□□ -0.86
CDH1-208ENST00000565810 GTF3C3Q9Y5Q9 886 aa9.67□□□□□ -0.86
CDH1-208ENST00000565810 BCORQ6W2J9 1755 aa9.67□□□□□ -0.86
CDH1-208ENST00000565810 QSER1Q2KHR3 1735 aa9.67□□□□□ -0.86
CDH1-208ENST00000565810 RIC1Q4ADV7 1423 aa9.66□□□□□ -0.86
CDH1-208ENST00000565810 SURF6O75683 361 aaKnown RBP9.66□□□□□ -0.86
CDH1-208ENST00000565810 OS9Q13438 667 aaPredicted RBP9.66□□□□□ -0.86
CDH1-208ENST00000565810 POLA2Q14181 598 aa9.66□□□□□ -0.86
CDH1-208ENST00000565810 CRY2Q49AN0 593 aa9.66□□□□□ -0.86
CDH1-208ENST00000565810 C3orf67Q6ZVT6 689 aa9.66□□□□□ -0.86
CDH1-208ENST00000565810 SIRT2Q8IXJ6 389 aa9.66□□□□□ -0.86
CDH1-208ENST00000565810 CNKSR1Q969H4 720 aa9.66□□□□□ -0.86
CDH1-208ENST00000565810 ZNF622Q969S3 477 aaKnown RBP eCLIP9.66□□□□□ -0.86
CDH1-208ENST00000565810 COPRSQ9NQ92 184 aa9.66□□□□□ -0.86
CDH1-208ENST00000565810 CNNM1Q9NRU3 951 aa9.66□□□□□ -0.86
CDH1-208ENST00000565810 FBXO3Q9UK99 471 aa9.66□□□□□ -0.86
CDH1-208ENST00000565810 NUP98P52948 1817 aa9.66□□□□□ -0.86
CDH1-208ENST00000565810 RTL9Q8NET4 1388 aa9.65□□□□□ -0.86
CDH1-208ENST00000565810 BBOX1O75936 387 aa9.65□□□□□ -0.86
CDH1-208ENST00000565810 SRGNP10124 158 aa9.65□□□□□ -0.86
CDH1-208ENST00000565810 HOXA10P31260 410 aaPredicted RBP9.65□□□□□ -0.86
CDH1-208ENST00000565810 RPS8P62241 208 aaKnown RBP9.65□□□□□ -0.86
CDH1-208ENST00000565810 PTPN12Q05209 780 aaKnown RBP9.65□□□□□ -0.86
CDH1-208ENST00000565810 GRAPQ13588 217 aa9.65□□□□□ -0.86
CDH1-208ENST00000565810 STYK1Q6J9G0 422 aa9.65□□□□□ -0.86
CDH1-208ENST00000565810 LDHAL6AQ6ZMR3 332 aa9.65□□□□□ -0.86
CDH1-208ENST00000565810 GRAPLQ8TC17 118 aaPredicted RBP9.65□□□□□ -0.86
CDH1-208ENST00000565810 GCC1Q96CN9 775 aa9.65□□□□□ -0.86
CDH1-208ENST00000565810 CRAMP1Q96RY5 1269 aa9.65□□□□□ -0.86
CDH1-208ENST00000565810 SEC31BQ9NQW1 1179 aa9.65□□□□□ -0.86
CDH1-208ENST00000565810 TUBGCP6Q96RT7 1819 aa9.64□□□□□ -0.87
CDH1-208ENST00000565810 EYA2O00167 538 aa9.64□□□□□ -0.87
CDH1-208ENST00000565810 RAB11FIP3O75154 756 aa9.64□□□□□ -0.87
CDH1-208ENST00000565810 IL15P40933 162 aaPredicted RBP9.64□□□□□ -0.87
CDH1-208ENST00000565810 RFX5P48382 616 aaPredicted RBP9.64□□□□□ -0.87
CDH1-208ENST00000565810 B4GALNT3Q6L9W6 998 aa9.64□□□□□ -0.87
CDH1-208ENST00000565810 TMC4Q7Z404 712 aa9.64□□□□□ -0.87
CDH1-208ENST00000565810 ERC1Q8IUD2 1116 aa9.64□□□□□ -0.87
CDH1-208ENST00000565810 CELF1Q92879 486 aaKnown RBP9.64□□□□□ -0.87
CDH1-208ENST00000565810 ZNF594Q96JF6 807 aaPredicted RBP9.64□□□□□ -0.87
CDH1-208ENST00000565810 SIL1Q9H173 461 aa9.64□□□□□ -0.87
CDH1-208ENST00000565810 DCTPP1Q9H773 170 aa9.64□□□□□ -0.87
CDH1-208ENST00000565810 PA2G4Q9UQ80 394 aaKnown RBP9.64□□□□□ -0.87
CDH1-208ENST00000565810 NOP58Q9Y2X3 529 aaKnown RBP9.64□□□□□ -0.87
CDH1-208ENST00000565810 C10orf71Q711Q0 1435 aa9.64□□□□□ -0.87
CDH1-208ENST00000565810 CIAO1O76071 339 aa9.63□□□□□ -0.87
CDH1-208ENST00000565810 IGHDP01880 384 aa9.63□□□□□ -0.87
CDH1-208ENST00000565810 DPEP1P16444 411 aa9.63□□□□□ -0.87
CDH1-208ENST00000565810 CHRNA5P30532 468 aa9.63□□□□□ -0.87
CDH1-208ENST00000565810 CENPQQ7L2Z9 268 aaPredicted RBP9.63□□□□□ -0.87
CDH1-208ENST00000565810 TTLL6Q8N841 843 aa9.63□□□□□ -0.87
CDH1-208ENST00000565810 KLHDC4Q8TBB5 520 aa9.63□□□□□ -0.87
CDH1-208ENST00000565810 KIF1BPQ96EK5 621 aa9.63□□□□□ -0.87
CDH1-208ENST00000565810 BSDC1Q9NW68 430 aaPredicted RBP9.63□□□□□ -0.87
CDH1-208ENST00000565810 PIM2Q9P1W9 311 aa9.63□□□□□ -0.87
CDH1-208ENST00000565810 EXOC6BQ9Y2D4 811 aa9.63□□□□□ -0.87
CDH1-208ENST00000565810 ANKRD36CQ5JPF3 1778 aa9.63□□□□□ -0.87
CDH1-208ENST00000565810 MROH5Q6ZUA9 1318 aa9.62□□□□□ -0.87
CDH1-208ENST00000565810 A0A0G2JLW4 131 aa9.62□□□□□ -0.87
CDH1-208ENST00000565810 PPEF1O14829 653 aaPredicted RBP9.62□□□□□ -0.87
CDH1-208ENST00000565810 METTL24Q5JXM2 366 aa9.62□□□□□ -0.87
CDH1-208ENST00000565810 CEP126Q9P2H0 1117 aa9.62□□□□□ -0.87
CDH1-208ENST00000565810 CASZ1Q86V15 1759 aa9.62□□□□□ -0.87
CDH1-208ENST00000565810 COL24A1Q17RW2 1714 aa9.62□□□□□ -0.87
CDH1-208ENST00000565810 AFDNP55196 1824 aaKnown RBP9.61□□□□□ -0.87
CDH1-208ENST00000565810 APBB1O00213 710 aa9.61□□□□□ -0.87
CDH1-208ENST00000565810 LRRC24Q50LG9 513 aa9.61□□□□□ -0.87
CDH1-208ENST00000565810 DALRD3Q5D0E6 543 aaKnown RBP9.61□□□□□ -0.87
CDH1-208ENST00000565810 ANKRD45Q5TZF3 282 aa9.61□□□□□ -0.87
CDH1-208ENST00000565810 CC2D2BQ6DHV5 1058 aa9.61□□□□□ -0.87
CDH1-208ENST00000565810 SP8Q8IXZ3 490 aa9.61□□□□□ -0.87
CDH1-208ENST00000565810 SMC5Q8IY18 1101 aa9.61□□□□□ -0.87
CDH1-208ENST00000565810 LRRCC1Q9C099 1032 aa9.61□□□□□ -0.87
CDH1-208ENST00000565810 FHDC1Q9C0D6 1143 aaPredicted RBP9.61□□□□□ -0.87
CDH1-208ENST00000565810 ANKRD2Q9GZV1 360 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 617.2 ms