RNA–Protein interactions for RNA: ENST00000565160.5

BBS4-208, Transcript of Bardet-Biedl syndrome 4, human

TSL 3

Gene BBS4, Length 681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS4-208	ENST00000565160	NANOS1	Q8WY41	292 aa	Known RBP	7.27	□□□□□ -1.25
BBS4-208	ENST00000565160	VTI1A	Q96AJ9	217 aa		7.27	□□□□□ -1.25
BBS4-208	ENST00000565160	SAP130	Q9H0E3	1048 aa		7.27	□□□□□ -1.25
BBS4-208	ENST00000565160	SEPT3	Q9UH03	358 aa		7.27	□□□□□ -1.25
BBS4-208	ENST00000565160	LRFN2	Q9ULH4	789 aa		7.27	□□□□□ -1.25
BBS4-208	ENST00000565160	CLTC	Q00610	1675 aa	Known RBP	7.27	□□□□□ -1.25
BBS4-208	ENST00000565160	RAPGEF6	Q8TEU7	1601 aa		7.27	□□□□□ -1.25
BBS4-208	ENST00000565160	ROBO1	Q9Y6N7	1651 aa		7.26	□□□□□ -1.25
BBS4-208	ENST00000565160	NAA30	Q147X3	362 aa	Predicted RBP	7.26	□□□□□ -1.25
BBS4-208	ENST00000565160	ARSJ	Q5FYB0	599 aa	Predicted RBP	7.26	□□□□□ -1.25
BBS4-208	ENST00000565160	HSH2D	Q96JZ2	352 aa		7.26	□□□□□ -1.25
BBS4-208	ENST00000565160	NUCKS1	Q9H1E3	243 aa	Known RBP	7.26	□□□□□ -1.25
BBS4-208	ENST00000565160	KIDINS220	Q9ULH0	1771 aa		7.25	□□□□□ -1.25
BBS4-208	ENST00000565160	ZC3H13	Q5T200	1668 aa	Known RBP	7.25	□□□□□ -1.25
BBS4-208	ENST00000565160	CDK12	Q9NYV4	1490 aa	Predicted RBP	7.25	□□□□□ -1.25
BBS4-208	ENST00000565160	RTN1	Q16799	776 aa		7.25	□□□□□ -1.25
BBS4-208	ENST00000565160	COX20	Q5RI15	118 aa		7.25	□□□□□ -1.25
BBS4-208	ENST00000565160	BICDL1	Q6ZP65	573 aa		7.25	□□□□□ -1.25
BBS4-208	ENST00000565160	PGBD3	Q8N328	593 aa		7.25	□□□□□ -1.25
BBS4-208	ENST00000565160	ZNF280C	Q8ND82	737 aa		7.25	□□□□□ -1.25
BBS4-208	ENST00000565160	GTPBP3	Q969Y2	492 aa	Known RBP	7.25	□□□□□ -1.25
BBS4-208	ENST00000565160	COL26A1	Q96A83	441 aa		7.25	□□□□□ -1.25
BBS4-208	ENST00000565160	MYO19	Q96H55	970 aa		7.25	□□□□□ -1.25
BBS4-208	ENST00000565160	KLK14	Q9P0G3	267 aa		7.25	□□□□□ -1.25
BBS4-208	ENST00000565160	BCS1L	Q9Y276	419 aa		7.25	□□□□□ -1.25
BBS4-208	ENST00000565160	SCAPER	Q9BY12	1400 aa		7.25	□□□□□ -1.25
BBS4-208	ENST00000565160	DEPDC5	O75140	1603 aa		7.24	□□□□□ -1.25
BBS4-208	ENST00000565160	LRP6	O75581	1613 aa		7.24	□□□□□ -1.25
BBS4-208	ENST00000565160		H7C1W4	665 aa		7.24	□□□□□ -1.25
BBS4-208	ENST00000565160	GPR25	O00155	361 aa		7.24	□□□□□ -1.25
BBS4-208	ENST00000565160	PTCD1	O75127	700 aa	Known RBP	7.24	□□□□□ -1.25
BBS4-208	ENST00000565160	VSIG8	P0DPA2	414 aa		7.24	□□□□□ -1.25
BBS4-208	ENST00000565160	PDE4C	Q08493	712 aa		7.24	□□□□□ -1.25
BBS4-208	ENST00000565160	LRRC69	Q6ZNQ3	347 aa		7.24	□□□□□ -1.25
BBS4-208	ENST00000565160	TRAIP	Q9BWF2	469 aa		7.24	□□□□□ -1.25
BBS4-208	ENST00000565160	IQGAP1	P46940	1657 aa		7.24	□□□□□ -1.25
BBS4-208	ENST00000565160	NUP153	P49790	1475 aa	Known RBP	7.24	□□□□□ -1.25
BBS4-208	ENST00000565160	GOLGA3	Q08378	1498 aa		7.24	□□□□□ -1.25
BBS4-208	ENST00000565160	DGKZ	Q13574	1117 aa		7.23	□□□□□ -1.25
BBS4-208	ENST00000565160	LBR	Q14739	615 aa	Known RBP	7.23	□□□□□ -1.25
BBS4-208	ENST00000565160	EFHC2	Q5JST6	749 aa		7.23	□□□□□ -1.25
BBS4-208	ENST00000565160	FAM26D	Q5JW98	314 aa		7.23	□□□□□ -1.25
BBS4-208	ENST00000565160	LCE2A	Q5TA79	106 aa	Predicted RBP	7.23	□□□□□ -1.25
BBS4-208	ENST00000565160	C16orf46	Q6P387	395 aa		7.23	□□□□□ -1.25
BBS4-208	ENST00000565160	SV2A	Q7L0J3	742 aa		7.23	□□□□□ -1.25
BBS4-208	ENST00000565160	NLRP8	Q86W28	1048 aa		7.23	□□□□□ -1.25
BBS4-208	ENST00000565160	GMCL1	Q96IK5	515 aa		7.23	□□□□□ -1.25
BBS4-208	ENST00000565160	SUSD3	Q96L08	255 aa		7.23	□□□□□ -1.25
BBS4-208	ENST00000565160	ZCCHC2	Q9C0B9	1178 aa	Known RBP	7.23	□□□□□ -1.25
BBS4-208	ENST00000565160	HCN2	Q9UL51	889 aa		7.23	□□□□□ -1.25
BBS4-208	ENST00000565160	GPC6	Q9Y625	555 aa	Predicted RBP	7.23	□□□□□ -1.25
BBS4-208	ENST00000565160	CNTLN	Q9NXG0	1405 aa		7.23	□□□□□ -1.25
BBS4-208	ENST00000565160	MYO5C	Q9NQX4	1742 aa		7.23	□□□□□ -1.25
BBS4-208	ENST00000565160	MED14	O60244	1454 aa		7.23	□□□□□ -1.25
BBS4-208	ENST00000565160	FAM135B	Q49AJ0	1406 aa		7.22	□□□□□ -1.25
BBS4-208	ENST00000565160	TNFRSF10B	O14763	440 aa		7.22	□□□□□ -1.25
BBS4-208	ENST00000565160	WFS1	O76024	890 aa		7.22	□□□□□ -1.25
BBS4-208	ENST00000565160	SLC16A10	Q8TF71	515 aa		7.22	□□□□□ -1.25
BBS4-208	ENST00000565160	NDFIP2	Q9NV92	336 aa		7.22	□□□□□ -1.25
BBS4-208	ENST00000565160	UTRN	P46939	3433 aa		7.22	□□□□□ -1.25
BBS4-208	ENST00000565160	PHLPP1	O60346	1717 aa		7.21	□□□□□ -1.25
BBS4-208	ENST00000565160	COL16A1	Q07092	1604 aa	Predicted RBP	7.21	□□□□□ -1.26
BBS4-208	ENST00000565160	BNIP3L	O60238	219 aa		7.21	□□□□□ -1.26
BBS4-208	ENST00000565160	GAS6	Q14393	721 aa		7.21	□□□□□ -1.26
BBS4-208	ENST00000565160	TREML4	Q6UXN2	200 aa		7.21	□□□□□ -1.26
BBS4-208	ENST00000565160	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	7.21	□□□□□ -1.26
BBS4-208	ENST00000565160	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	7.21	□□□□□ -1.26
BBS4-208	ENST00000565160	A2ML1	A8K2U0	1454 aa		7.21	□□□□□ -1.26
BBS4-208	ENST00000565160	ITSN2	Q9NZM3	1697 aa		7.21	□□□□□ -1.26
BBS4-208	ENST00000565160	CDK13	Q14004	1512 aa	Known RBP	7.21	□□□□□ -1.26
BBS4-208	ENST00000565160	ZMYM3	Q14202	1370 aa		7.2	□□□□□ -1.26
BBS4-208	ENST00000565160	BRD1	O95696	1058 aa		7.2	□□□□□ -1.26
BBS4-208	ENST00000565160	SERPINB4	P48594	390 aa		7.2	□□□□□ -1.26
BBS4-208	ENST00000565160	KRT76	Q01546	638 aa		7.2	□□□□□ -1.26
BBS4-208	ENST00000565160	C11orf91	Q3C1V1	193 aa		7.2	□□□□□ -1.26
BBS4-208	ENST00000565160	SAMD5	Q5TGI4	173 aa		7.2	□□□□□ -1.26
BBS4-208	ENST00000565160	B4GALNT3	Q6L9W6	998 aa		7.2	□□□□□ -1.26
BBS4-208	ENST00000565160	TXNDC2	Q86VQ3	553 aa		7.2	□□□□□ -1.26
BBS4-208	ENST00000565160	GTF3C2	Q8WUA4	911 aa	Predicted RBP	7.2	□□□□□ -1.26
BBS4-208	ENST00000565160	IRF7	Q92985	503 aa		7.2	□□□□□ -1.26
BBS4-208	ENST00000565160	ABHD17A	Q96GS6	310 aa		7.2	□□□□□ -1.26
BBS4-208	ENST00000565160	DMGDH	Q9UI17	866 aa	Known RBP	7.2	□□□□□ -1.26
BBS4-208	ENST00000565160	PCDHGC4	Q9Y5F7	938 aa		7.2	□□□□□ -1.26
BBS4-208	ENST00000565160	GJA3	Q9Y6H8	435 aa		7.2	□□□□□ -1.26
BBS4-208	ENST00000565160	PLCH2	O75038	1416 aa		7.19	□□□□□ -1.26
BBS4-208	ENST00000565160	ZNF518A	Q6AHZ1	1483 aa		7.19	□□□□□ -1.26
BBS4-208	ENST00000565160	CDC42BPB	Q9Y5S2	1711 aa		7.19	□□□□□ -1.26
BBS4-208	ENST00000565160	DCDC2B	A2VCK2	349 aa		7.19	□□□□□ -1.26
BBS4-208	ENST00000565160	TGFBR3L	H3BV60	316 aa		7.19	□□□□□ -1.26
BBS4-208	ENST00000565160	ATXN7	O15265	892 aa	Predicted RBP	7.19	□□□□□ -1.26
BBS4-208	ENST00000565160	GMPR	P36959	345 aa		7.19	□□□□□ -1.26
BBS4-208	ENST00000565160	MTMR3	Q13615	1198 aa		7.19	□□□□□ -1.26
BBS4-208	ENST00000565160	RNFT1	Q5M7Z0	435 aa		7.19	□□□□□ -1.26
BBS4-208	ENST00000565160	NEUROD4	Q9HD90	331 aa		7.19	□□□□□ -1.26
BBS4-208	ENST00000565160	SAMD9	Q5K651	1589 aa		7.19	□□□□□ -1.26
BBS4-208	ENST00000565160	MLH3	Q9UHC1	1453 aa		7.18	□□□□□ -1.26
BBS4-208	ENST00000565160	KHNYN	O15037	678 aa	Known RBP	7.18	□□□□□ -1.26
BBS4-208	ENST00000565160	EFS	O43281	561 aa		7.18	□□□□□ -1.26
BBS4-208	ENST00000565160	FAM157B	P0CG42	384 aa		7.18	□□□□□ -1.26
BBS4-208	ENST00000565160	PDIA4	P13667	645 aa	Known RBP	7.18	□□□□□ -1.26

Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms