RNA–Protein interactions for RNA: ENST00000565119.1

CHD9-214, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 824 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-214ENST00000565119 ARID1BQ8NFD5 2236 aaPredicted RBP9.72□□□□□ -0.85
CHD9-214ENST00000565119 MRPL18Q9H0U6 180 aaKnown RBP9.71□□□□□ -0.86
CHD9-214ENST00000565119 ATAD2Q6PL18 1390 aa9.71□□□□□ -0.86
CHD9-214ENST00000565119 TARSP26639 723 aaKnown RBP9.7□□□□□ -0.86
CHD9-214ENST00000565119 GPLD1P80108 840 aa9.7□□□□□ -0.86
CHD9-214ENST00000565119 Q6ZS46 218 aa9.7□□□□□ -0.86
CHD9-214ENST00000565119 PLEKHM2Q8IWE5 1019 aa9.7□□□□□ -0.86
CHD9-214ENST00000565119 LARGE2Q8N3Y3 721 aa9.7□□□□□ -0.86
CHD9-214ENST00000565119 OGFOD1Q8N543 542 aa9.7□□□□□ -0.86
CHD9-214ENST00000565119 IFT43Q96FT9 208 aa9.7□□□□□ -0.86
CHD9-214ENST00000565119 USP17L3A6NCW0 530 aa9.69□□□□□ -0.86
CHD9-214ENST00000565119 USP17L4A6NCW7 530 aa9.69□□□□□ -0.86
CHD9-214ENST00000565119 DKK1O94907 266 aa9.69□□□□□ -0.86
CHD9-214ENST00000565119 IGLV1-40P01703 118 aa9.69□□□□□ -0.86
CHD9-214ENST00000565119 INPP5BP32019 993 aa9.69□□□□□ -0.86
CHD9-214ENST00000565119 USP17L2Q6R6M4 530 aa9.69□□□□□ -0.86
CHD9-214ENST00000565119 HFE2Q6ZVN8 426 aa9.69□□□□□ -0.86
CHD9-214ENST00000565119 USP17L1Q7RTZ2 530 aa9.69□□□□□ -0.86
CHD9-214ENST00000565119 SCG3Q8WXD2 468 aaKnown RBP9.69□□□□□ -0.86
CHD9-214ENST00000565119 RAXQ9Y2V3 346 aa9.69□□□□□ -0.86
CHD9-214ENST00000565119 PALM3A6NDB9 673 aaPredicted RBP9.68□□□□□ -0.86
CHD9-214ENST00000565119 PTCD1O75127 700 aaKnown RBP9.68□□□□□ -0.86
CHD9-214ENST00000565119 RTN1Q16799 776 aa9.68□□□□□ -0.86
CHD9-214ENST00000565119 CHMP7Q8WUX9 453 aaPredicted RBP9.68□□□□□ -0.86
CHD9-214ENST00000565119 COG6Q9Y2V7 657 aa9.68□□□□□ -0.86
CHD9-214ENST00000565119 MCM6Q14566 821 aa9.67□□□□□ -0.86
CHD9-214ENST00000565119 SIX5Q8N196 739 aa9.67□□□□□ -0.86
CHD9-214ENST00000565119 AGGF1Q8N302 714 aaeCLIP9.67□□□□□ -0.86
CHD9-214ENST00000565119 GSC2O15499 205 aa9.66□□□□□ -0.86
CHD9-214ENST00000565119 SASH3O75995 380 aa9.66□□□□□ -0.86
CHD9-214ENST00000565119 EPB42P16452 691 aa9.66□□□□□ -0.86
CHD9-214ENST00000565119 RARAP10276 462 aa9.65□□□□□ -0.86
CHD9-214ENST00000565119 GLB1P16278 677 aa9.65□□□□□ -0.86
CHD9-214ENST00000565119 EIF2AK2P19525 551 aaKnown RBP9.65□□□□□ -0.86
CHD9-214ENST00000565119 SPINK2P20155 84 aa9.65□□□□□ -0.86
CHD9-214ENST00000565119 IDH3AP50213 366 aa9.65□□□□□ -0.86
CHD9-214ENST00000565119 ZDHHC13Q8IUH4 622 aa9.65□□□□□ -0.86
CHD9-214ENST00000565119 BCANQ96GW7 911 aa9.65□□□□□ -0.86
CHD9-214ENST00000565119 ZNF594Q96JF6 807 aaPredicted RBP9.65□□□□□ -0.86
CHD9-214ENST00000565119 UBL7Q96S82 380 aaPredicted RBP9.65□□□□□ -0.86
CHD9-214ENST00000565119 STOML1Q9UBI4 398 aa9.65□□□□□ -0.86
CHD9-214ENST00000565119 GAS2L2Q8NHY3 880 aa9.64□□□□□ -0.87
CHD9-214ENST00000565119 KRTAP4-9Q9BYQ8 210 aa9.64□□□□□ -0.87
CHD9-214ENST00000565119 MKRN1Q9UHC7 482 aaKnown RBP9.64□□□□□ -0.87
CHD9-214ENST00000565119 NRLP54845 237 aa9.63□□□□□ -0.87
CHD9-214ENST00000565119 SETDB1Q15047 1291 aa9.63□□□□□ -0.87
CHD9-214ENST00000565119 ADAMTS19Q8TE59 1207 aa9.63□□□□□ -0.87
CHD9-214ENST00000565119 KLK14Q9P0G3 267 aa9.63□□□□□ -0.87
CHD9-214ENST00000565119 GDF6Q6KF10 455 aaPredicted RBP9.62□□□□□ -0.87
CHD9-214ENST00000565119 IL22RA1Q8N6P7 574 aa9.62□□□□□ -0.87
CHD9-214ENST00000565119 PLD4Q96BZ4 506 aa9.62□□□□□ -0.87
CHD9-214ENST00000565119 UCN2Q96RP3 112 aa9.62□□□□□ -0.87
CHD9-214ENST00000565119 J3QW42 95 aa9.61□□□□□ -0.87
CHD9-214ENST00000565119 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.61□□□□□ -0.87
CHD9-214ENST00000565119 ARMC10Q8N2F6 343 aa9.6□□□□□ -0.87
CHD9-214ENST00000565119 SRA1Q9HD15 236 aaKnown RBP9.6□□□□□ -0.87
CHD9-214ENST00000565119 C11orf16Q9NQ32 467 aa9.6□□□□□ -0.87
CHD9-214ENST00000565119 TLR7Q9NYK1 1049 aaKnown RBP9.6□□□□□ -0.87
CHD9-214ENST00000565119 ATP9BO43861 1147 aa9.59□□□□□ -0.87
CHD9-214ENST00000565119 RASA1P20936 1047 aa9.59□□□□□ -0.87
CHD9-214ENST00000565119 ARSDP51689 593 aa9.59□□□□□ -0.87
CHD9-214ENST00000565119 DTX1Q86Y01 620 aa9.59□□□□□ -0.87
CHD9-214ENST00000565119 RBM19Q9Y4C8 960 aaKnown RBP9.59□□□□□ -0.87
CHD9-214ENST00000565119 PRR19A6NJB7 356 aa9.58□□□□□ -0.88
CHD9-214ENST00000565119 DHX15O43143 795 aaKnown RBP9.58□□□□□ -0.88
CHD9-214ENST00000565119 NFIAQ12857 509 aa9.58□□□□□ -0.88
CHD9-214ENST00000565119 INTS5Q6P9B9 1019 aaKnown RBP9.58□□□□□ -0.88
CHD9-214ENST00000565119 MAP4K3Q8IVH8 894 aa9.58□□□□□ -0.88
CHD9-214ENST00000565119 LOC102724428A0A0B4J2F2 783 aa9.57□□□□□ -0.88
CHD9-214ENST00000565119 POM121CA8CG34 1229 aa9.57□□□□□ -0.88
CHD9-214ENST00000565119 LGR5O75473 907 aa9.57□□□□□ -0.88
CHD9-214ENST00000565119 ARID4AP29374 1257 aaPredicted RBP9.57□□□□□ -0.88
CHD9-214ENST00000565119 GRIK1P39086 918 aa9.57□□□□□ -0.88
CHD9-214ENST00000565119 SIK1P57059 783 aa9.57□□□□□ -0.88
CHD9-214ENST00000565119 ADGRE2Q9UHX3 823 aa9.57□□□□□ -0.88
CHD9-214ENST00000565119 MICAL2O94851 1124 aa9.56□□□□□ -0.88
CHD9-214ENST00000565119 WISP1O95388 367 aa9.56□□□□□ -0.88
CHD9-214ENST00000565119 SEC13P55735 322 aa9.56□□□□□ -0.88
CHD9-214ENST00000565119 DGKZQ13574 1117 aa9.56□□□□□ -0.88
CHD9-214ENST00000565119 POM121Q96HA1 1249 aa9.56□□□□□ -0.88
CHD9-214ENST00000565119 C7orf69Q9H7B7 122 aa9.56□□□□□ -0.88
CHD9-214ENST00000565119 USP20Q9Y2K6 914 aa9.56□□□□□ -0.88
CHD9-214ENST00000565119 JAG1P78504 1218 aa9.55□□□□□ -0.88
CHD9-214ENST00000565119 TRIM42Q8IWZ5 723 aa9.55□□□□□ -0.88
CHD9-214ENST00000565119 GALNT11Q8NCW6 608 aa9.55□□□□□ -0.88
CHD9-214ENST00000565119 DCAF11Q8TEB1 546 aa9.55□□□□□ -0.88
CHD9-214ENST00000565119 TRIM33Q9UPN9 1127 aa9.55□□□□□ -0.88
CHD9-214ENST00000565119 OPLAHO14841 1288 aa9.54□□□□□ -0.88
CHD9-214ENST00000565119 WNT11O96014 354 aa9.54□□□□□ -0.88
CHD9-214ENST00000565119 RNF43Q68DV7 783 aa9.54□□□□□ -0.88
CHD9-214ENST00000565119 NSUN5Q96P11 429 aaKnown RBP9.54□□□□□ -0.88
CHD9-214ENST00000565119 HMX2A2RU54 273 aa9.53□□□□□ -0.88
CHD9-214ENST00000565119 EGFRP00533 1210 aa9.53□□□□□ -0.88
CHD9-214ENST00000565119 WWC1Q8IX03 1113 aa9.53□□□□□ -0.88
CHD9-214ENST00000565119 RTCBQ9Y3I0 505 aaKnown RBP9.53□□□□□ -0.88
CHD9-214ENST00000565119 GHRHP01286 108 aa9.52□□□□□ -0.89
CHD9-214ENST00000565119 IGFBP4P22692 258 aa9.52□□□□□ -0.89
CHD9-214ENST00000565119 UTP4Q969X6 686 aaKnown RBP9.52□□□□□ -0.89
CHD9-214ENST00000565119 HINFPQ9BQA5 517 aa9.52□□□□□ -0.89
CHD9-214ENST00000565119 DBNDD2Q9BQY9 259 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms