RNA–Protein interactions for RNA: ENST00000564709.5

SPSB3-206, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 2,316 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-206ENST00000564709 PSMA5P28066 241 aa26.7■■□□□ 1.86
SPSB3-206ENST00000564709 NBPF14Q5TI25 921 aa26.7■■□□□ 1.86
SPSB3-206ENST00000564709 NBPF10Q6P3W6 841 aaKnown RBP26.7■■□□□ 1.86
SPSB3-206ENST00000564709 NBPF15Q8N660 670 aa26.7■■□□□ 1.86
SPSB3-206ENST00000564709 PLBD2Q8NHP8 589 aa26.7■■□□□ 1.86
SPSB3-206ENST00000564709 CASP7P55210 303 aa26.7■■□□□ 1.86
SPSB3-206ENST00000564709 RNF20Q5VTR2 975 aa26.7■■□□□ 1.86
SPSB3-206ENST00000564709 LMBR1LQ6UX01 489 aa26.7■■□□□ 1.86
SPSB3-206ENST00000564709 PHF14O94880 888 aa26.69■■□□□ 1.86
SPSB3-206ENST00000564709 CCDC129Q6ZRS4 1044 aa26.69■■□□□ 1.86
SPSB3-206ENST00000564709 PARP4Q9UKK3 1724 aaKnown RBP26.69■■□□□ 1.86
SPSB3-206ENST00000564709 TAF5LO75529 589 aa26.68■■□□□ 1.86
SPSB3-206ENST00000564709 TTLL7Q6ZT98 887 aa26.68■■□□□ 1.86
SPSB3-206ENST00000564709 ATP6V1DQ9Y5K8 247 aa26.68■■□□□ 1.86
SPSB3-206ENST00000564709 JCADQ9P266 1359 aa26.68■■□□□ 1.86
SPSB3-206ENST00000564709 RPS6KB1P23443 525 aa26.67■■□□□ 1.86
SPSB3-206ENST00000564709 UBE2HP62256 183 aa26.67■■□□□ 1.86
SPSB3-206ENST00000564709 CCDC183Q5T5S1 534 aa26.67■■□□□ 1.86
SPSB3-206ENST00000564709 SEC62Q99442 399 aaKnown RBP26.67■■□□□ 1.86
SPSB3-206ENST00000564709 CPDO75976 1380 aa26.67■■□□□ 1.86
SPSB3-206ENST00000564709 DDX46Q7L014 1031 aaKnown RBP26.67■■□□□ 1.86
SPSB3-206ENST00000564709 ZNF609O15014 1411 aa26.67■■□□□ 1.86
SPSB3-206ENST00000564709 STK3Q13188 491 aa26.66■■□□□ 1.86
SPSB3-206ENST00000564709 TOB2Q14106 344 aaPredicted RBP26.66■■□□□ 1.86
SPSB3-206ENST00000564709 TOM1L2Q6ZVM7 507 aa26.66■■□□□ 1.86
SPSB3-206ENST00000564709 FERMT3Q86UX7 667 aa26.65■■□□□ 1.86
SPSB3-206ENST00000564709 PRDM11Q9NQV5 511 aa26.65■■□□□ 1.86
SPSB3-206ENST00000564709 EIF2AK3Q9NZJ5 1116 aaKnown RBP26.65■■□□□ 1.86
SPSB3-206ENST00000564709 A1BGP04217 495 aa26.64■■□□□ 1.86
SPSB3-206ENST00000564709 HSPA2P54652 639 aa26.64■■□□□ 1.86
SPSB3-206ENST00000564709 FOXO4P98177 505 aa26.64■■□□□ 1.86
SPSB3-206ENST00000564709 LARP1BQ659C4 914 aaKnown RBP26.64■■□□□ 1.86
SPSB3-206ENST00000564709 CDC37L1Q7L3B6 337 aa26.64■■□□□ 1.86
SPSB3-206ENST00000564709 HS1BP3Q53T59 392 aa26.64■■□□□ 1.85
SPSB3-206ENST00000564709 NUP188Q5SRE5 1749 aa26.63■■□□□ 1.85
SPSB3-206ENST00000564709 TJP1Q07157 1748 aa26.63■■□□□ 1.85
SPSB3-206ENST00000564709 ZCRB1Q8TBF4 217 aaKnown RBP26.63■■□□□ 1.85
SPSB3-206ENST00000564709 ZBTB3Q9H5J0 574 aa26.63■■□□□ 1.85
SPSB3-206ENST00000564709 PCDH11XQ9BZA7 1347 aa26.63■■□□□ 1.85
SPSB3-206ENST00000564709 PCDH11YQ9BZA8 1340 aa26.63■■□□□ 1.85
SPSB3-206ENST00000564709 PLEKHG2Q9H7P9 1386 aa26.63■■□□□ 1.85
SPSB3-206ENST00000564709 HMG20BQ9P0W2 317 aa26.62■■□□□ 1.85
SPSB3-206ENST00000564709 NOL7Q9UMY1 257 aaKnown RBP26.62■■□□□ 1.85
SPSB3-206ENST00000564709 SLFNL1Q499Z3 407 aa26.62■■□□□ 1.85
SPSB3-206ENST00000564709 FAM173BQ6P4H8 233 aa26.62■■□□□ 1.85
SPSB3-206ENST00000564709 HAUS7Q99871 368 aa26.62■■□□□ 1.85
SPSB3-206ENST00000564709 ANKRD1Q15327 319 aa26.61■■□□□ 1.85
SPSB3-206ENST00000564709 BRINP3Q76B58 766 aa26.61■■□□□ 1.85
SPSB3-206ENST00000564709 NEUROD6Q96NK8 337 aa26.61■■□□□ 1.85
SPSB3-206ENST00000564709 UBR2Q8IWV8 1755 aa26.61■■□□□ 1.85
SPSB3-206ENST00000564709 WDR17Q8IZU2 1322 aa26.61■■□□□ 1.85
SPSB3-206ENST00000564709 XIRP1Q702N8 1843 aaKnown RBP26.61■■□□□ 1.85
SPSB3-206ENST00000564709 H7C1W4 665 aa26.61■■□□□ 1.85
SPSB3-206ENST00000564709 USPL1Q5W0Q7 1092 aa26.6■■□□□ 1.85
SPSB3-206ENST00000564709 CWC25Q9NXE8 425 aaPredicted RBP26.6■■□□□ 1.85
SPSB3-206ENST00000564709 KCPQ6ZWJ8 1503 aa26.59■■□□□ 1.85
SPSB3-206ENST00000564709 HCLS1P14317 486 aaPredicted RBP26.59■■□□□ 1.85
SPSB3-206ENST00000564709 ATG9AQ7Z3C6 839 aa26.59■■□□□ 1.85
SPSB3-206ENST00000564709 ZNF594Q96JF6 807 aaPredicted RBP26.59■■□□□ 1.85
SPSB3-206ENST00000564709 TIMM10P62072 90 aa26.58■■□□□ 1.85
SPSB3-206ENST00000564709 TSGA10IPQ3SY00 556 aa26.58■■□□□ 1.85
SPSB3-206ENST00000564709 GIMAP6Q6P9H5 292 aa26.58■■□□□ 1.85
SPSB3-206ENST00000564709 GOLIM4O00461 696 aa26.57■■□□□ 1.84
SPSB3-206ENST00000564709 CSPP1Q1MSJ5 1256 aa26.57■■□□□ 1.84
SPSB3-206ENST00000564709 MCMDC2Q4G0Z9 681 aa26.57■■□□□ 1.84
SPSB3-206ENST00000564709 CYP21A2P08686 494 aa26.57■■□□□ 1.84
SPSB3-206ENST00000564709 NEK1Q96PY6 1258 aa26.57■■□□□ 1.84
SPSB3-206ENST00000564709 CCDC39Q9UFE4 941 aa26.57■■□□□ 1.84
SPSB3-206ENST00000564709 ZKSCAN5Q9Y2L8 839 aa26.57■■□□□ 1.84
SPSB3-206ENST00000564709 RFX7Q2KHR2 1363 aa26.56■■□□□ 1.84
SPSB3-206ENST00000564709 LRRC24Q50LG9 513 aa26.56■■□□□ 1.84
SPSB3-206ENST00000564709 ALDH8A1Q9H2A2 487 aaPredicted RBP26.56■■□□□ 1.84
SPSB3-206ENST00000564709 COL5A2P05997 1499 aaPredicted RBP26.56■■□□□ 1.84
SPSB3-206ENST00000564709 KBTBD3Q8NAB2 608 aa26.56■■□□□ 1.84
SPSB3-206ENST00000564709 LRRC2Q9BYS8 371 aa26.56■■□□□ 1.84
SPSB3-206ENST00000564709 KRT32Q14532 448 aa26.55■■□□□ 1.84
SPSB3-206ENST00000564709 TTC6Q86TZ1 520 aa26.55■■□□□ 1.84
SPSB3-206ENST00000564709 USP25Q9UHP3 1055 aa26.55■■□□□ 1.84
SPSB3-206ENST00000564709 U3KPZ7 1027 aaPredicted RBP26.55■■□□□ 1.84
SPSB3-206ENST00000564709 PAPPAQ13219 1627 aa26.55■■□□□ 1.84
SPSB3-206ENST00000564709 JAK2O60674 1132 aa26.55■■□□□ 1.84
SPSB3-206ENST00000564709 PTMAP06454 111 aaKnown RBP26.55■■□□□ 1.84
SPSB3-206ENST00000564709 Q6ZUG5 572 aa26.55■■□□□ 1.84
SPSB3-206ENST00000564709 MPNDQ8N594 471 aa26.55■■□□□ 1.84
SPSB3-206ENST00000564709 STRN4Q9NRL3 753 aa26.55■■□□□ 1.84
SPSB3-206ENST00000564709 ZNF330Q9Y3S2 320 aaPredicted RBP26.55■■□□□ 1.84
SPSB3-206ENST00000564709 ERVV-2B6SEH9 535 aa26.54■■□□□ 1.84
SPSB3-206ENST00000564709 HSP90B1P14625 803 aaKnown RBP26.54■■□□□ 1.84
SPSB3-206ENST00000564709 LAMA4Q16363 1823 aa26.54■■□□□ 1.84
SPSB3-206ENST00000564709 SHANK3Q9BYB0 1731 aa26.54■■□□□ 1.84
SPSB3-206ENST00000564709 LETM1O95202 739 aaPredicted RBP26.54■■□□□ 1.84
SPSB3-206ENST00000564709 PDCP20941 246 aa26.54■■□□□ 1.84
SPSB3-206ENST00000564709 KRT85P78386 507 aa26.54■■□□□ 1.84
SPSB3-206ENST00000564709 FAM184AQ8NB25 1140 aa26.54■■□□□ 1.84
SPSB3-206ENST00000564709 PAG1Q9NWQ8 432 aa26.54■■□□□ 1.84
SPSB3-206ENST00000564709 OFD1O75665 1012 aa26.53■■□□□ 1.84
SPSB3-206ENST00000564709 STOX1Q6ZVD7 989 aa26.53■■□□□ 1.84
SPSB3-206ENST00000564709 IL2RBP14784 551 aa26.52■■□□□ 1.84
SPSB3-206ENST00000564709 GTF3C6Q969F1 213 aa26.52■■□□□ 1.84
SPSB3-206ENST00000564709 PUS3Q9BZE2 481 aaKnown RBP26.52■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms