RNA–Protein interactions for RNA: ENST00000564634.5

CYLD-208, Transcript of CYLD lysine 63 deubiquitinase, human

TSL 3

Gene CYLD, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CYLD-208	ENST00000564634	NCBP3	Q53F19	620 aa	Known RBP	32.72	■■■□□ 2.83
CYLD-208	ENST00000564634	FAM9B	Q8IZU0	186 aa		32.72	■■■□□ 2.83
CYLD-208	ENST00000564634	ABHD8	Q96I13	439 aa		32.72	■■■□□ 2.83
CYLD-208	ENST00000564634	ADARB2	Q9NS39	739 aa	Known RBP	32.72	■■■□□ 2.83
CYLD-208	ENST00000564634	CXCL9	Q07325	125 aa		32.71	■■■□□ 2.83
CYLD-208	ENST00000564634	CCDC27	Q2M243	656 aa		32.71	■■■□□ 2.83
CYLD-208	ENST00000564634	NECTIN2	Q92692	538 aa		32.71	■■■□□ 2.83
CYLD-208	ENST00000564634	GPR101	Q96P66	508 aa	Predicted RBP	32.71	■■■□□ 2.83
CYLD-208	ENST00000564634	ZNF853	P0CG23	659 aa		32.7	■■■□□ 2.83
CYLD-208	ENST00000564634	GNAI1	P63096	354 aa		32.7	■■■□□ 2.83
CYLD-208	ENST00000564634	SLC10A5	Q5PT55	438 aa		32.7	■■■□□ 2.83
CYLD-208	ENST00000564634	IFT57	Q9NWB7	429 aa		32.7	■■■□□ 2.83
CYLD-208	ENST00000564634	ZNRF3	Q9ULT6	936 aa		32.7	■■■□□ 2.83
CYLD-208	ENST00000564634	TLL2	Q9Y6L7	1015 aa		32.7	■■■□□ 2.83
CYLD-208	ENST00000564634	HCLS1	P14317	486 aa	Predicted RBP	32.69	■■■□□ 2.82
CYLD-208	ENST00000564634	GMPS	P49915	693 aa	Predicted RBP	32.69	■■■□□ 2.82
CYLD-208	ENST00000564634	DPP8	Q6V1X1	898 aa	Predicted RBP	32.69	■■■□□ 2.82
CYLD-208	ENST00000564634	SUPT20H	Q8NEM7	779 aa		32.69	■■■□□ 2.82
CYLD-208	ENST00000564634	BEGAIN	Q9BUH8	593 aa		32.69	■■■□□ 2.82
CYLD-208	ENST00000564634	AIMP1	Q12904	312 aa	Known RBP	32.68	■■■□□ 2.82
CYLD-208	ENST00000564634	AOC2	O75106	756 aa		32.67	■■■□□ 2.82
CYLD-208	ENST00000564634	ZNF428	Q96B54	188 aa		32.67	■■■□□ 2.82
CYLD-208	ENST00000564634	RTFDC1	Q9BY42	306 aa	Predicted RBP	32.67	■■■□□ 2.82
CYLD-208	ENST00000564634	VPS33B	Q9H267	617 aa		32.67	■■■□□ 2.82
CYLD-208	ENST00000564634	MBIP	Q9NS73	344 aa		32.67	■■■□□ 2.82
CYLD-208	ENST00000564634	TSKS	Q9UJT2	592 aa		32.67	■■■□□ 2.82
CYLD-208	ENST00000564634	GLIS2	Q9BZE0	524 aa	Predicted RBP	32.66	■■■□□ 2.82
CYLD-208	ENST00000564634	RAD17	O75943	681 aa		32.65	■■■□□ 2.82
CYLD-208	ENST00000564634	CELF2	O95319	508 aa	Known RBP	32.65	■■■□□ 2.82
CYLD-208	ENST00000564634	COPS6	Q7L5N1	327 aa		32.65	■■■□□ 2.82
CYLD-208	ENST00000564634	NLRP10	Q86W26	655 aa		32.65	■■■□□ 2.82
CYLD-208	ENST00000564634	WWC1	Q8IX03	1113 aa		32.65	■■■□□ 2.82
CYLD-208	ENST00000564634	MPND	Q8N594	471 aa		32.65	■■■□□ 2.82
CYLD-208	ENST00000564634	XAGE3	Q8WTP9	111 aa		32.65	■■■□□ 2.82
CYLD-208	ENST00000564634	CIAPIN1	Q6FI81	312 aa		32.64	■■■□□ 2.82
CYLD-208	ENST00000564634	TAF1	P21675	1872 aa		32.63	■■■□□ 2.81
CYLD-208	ENST00000564634	KIAA2012	Q0VF49	1180 aa		32.63	■■■□□ 2.81
CYLD-208	ENST00000564634	HSP90AB3P	Q58FF7	597 aa		32.63	■■■□□ 2.81
CYLD-208	ENST00000564634	SP8	Q8IXZ3	490 aa		32.63	■■■□□ 2.81
CYLD-208	ENST00000564634	BCL2L13	Q9BXK5	485 aa		32.63	■■■□□ 2.81
CYLD-208	ENST00000564634	BBOX1	O75936	387 aa		32.62	■■■□□ 2.81
CYLD-208	ENST00000564634	HOXB7	P09629	217 aa		32.62	■■■□□ 2.81
CYLD-208	ENST00000564634	KRT24	Q2M2I5	525 aa		32.62	■■■□□ 2.81
CYLD-208	ENST00000564634	DDX46	Q7L014	1031 aa	Known RBP	32.62	■■■□□ 2.81
CYLD-208	ENST00000564634	ZNF408	Q9H9D4	720 aa		32.62	■■■□□ 2.81
CYLD-208	ENST00000564634	TRMT112	Q9UI30	125 aa	Known RBP	32.62	■■■□□ 2.81
CYLD-208	ENST00000564634	DUOX1	Q9NRD9	1551 aa		32.62	■■■□□ 2.81
CYLD-208	ENST00000564634	GRAP	Q13588	217 aa		32.6	■■■□□ 2.81
CYLD-208	ENST00000564634	SAPCD2	Q86UD0	394 aa		32.6	■■■□□ 2.81
CYLD-208	ENST00000564634	GRAPL	Q8TC17	118 aa	Predicted RBP	32.6	■■■□□ 2.81
CYLD-208	ENST00000564634	TRPM4	Q8TD43	1214 aa		32.6	■■■□□ 2.81
CYLD-208	ENST00000564634	SH3TC1	Q8TE82	1336 aa		32.59	■■■□□ 2.81
CYLD-208	ENST00000564634	SHTN1	A0MZ66	631 aa		32.59	■■■□□ 2.81
CYLD-208	ENST00000564634	CCER2	I3L3R5	266 aa		32.59	■■■□□ 2.81
CYLD-208	ENST00000564634	FAM161A	Q3B820	660 aa		32.59	■■■□□ 2.81
CYLD-208	ENST00000564634	CDHR2	Q9BYE9	1310 aa		32.58	■■■□□ 2.81
CYLD-208	ENST00000564634	HIRA	P54198	1017 aa	Predicted RBP	32.58	■■■□□ 2.81
CYLD-208	ENST00000564634	TCIRG1	Q13488	830 aa		32.58	■■■□□ 2.81
CYLD-208	ENST00000564634	TNIP1	Q15025	636 aa		32.58	■■■□□ 2.81
CYLD-208	ENST00000564634	LRRC37A	A6NMS7	1700 aa		32.57	■■■□□ 2.81
CYLD-208	ENST00000564634	YDJC	A8MPS7	323 aa		32.57	■■■□□ 2.8
CYLD-208	ENST00000564634	DUSP27	Q5VZP5	1158 aa		32.57	■■■□□ 2.8
CYLD-208	ENST00000564634	IL16	Q14005	1332 aa		32.56	■■■□□ 2.8
CYLD-208	ENST00000564634	CCDC85C	A6NKD9	419 aa		32.56	■■■□□ 2.8
CYLD-208	ENST00000564634	MAP2K2	P36507	400 aa		32.56	■■■□□ 2.8
CYLD-208	ENST00000564634	SALL2	Q9Y467	1007 aa	Predicted RBP	32.56	■■■□□ 2.8
CYLD-208	ENST00000564634	DDX60	Q8IY21	1712 aa	Known RBP	32.56	■■■□□ 2.8
CYLD-208	ENST00000564634	PGAP2	Q9UHJ9	254 aa		32.55	■■■□□ 2.8
CYLD-208	ENST00000564634	HDGFL1	Q5TGJ6	251 aa		32.54	■■■□□ 2.8
CYLD-208	ENST00000564634	DIEXF	Q68CQ4	756 aa	Known RBP	32.54	■■■□□ 2.8
CYLD-208	ENST00000564634	WDR63	Q8IWG1	891 aa		32.54	■■■□□ 2.8
CYLD-208	ENST00000564634	CNOT7	Q9UIV1	285 aa	Known RBP	32.54	■■■□□ 2.8
CYLD-208	ENST00000564634	CHPF2	Q9P2E5	772 aa		32.53	■■■□□ 2.8
CYLD-208	ENST00000564634	MICALL2	Q8IY33	904 aa		32.52	■■■□□ 2.8
CYLD-208	ENST00000564634	ZC3H15	Q8WU90	426 aa	Known RBP	32.52	■■■□□ 2.8
CYLD-208	ENST00000564634	ZBTB12	Q9Y330	459 aa	Predicted RBP	32.52	■■■□□ 2.8
CYLD-208	ENST00000564634	CDC37L1	Q7L3B6	337 aa		32.51	■■■□□ 2.79
CYLD-208	ENST00000564634	COL4A1	P02462	1669 aa		32.5	■■■□□ 2.79
CYLD-208	ENST00000564634	DLK2	Q6UY11	383 aa		32.5	■■■□□ 2.79
CYLD-208	ENST00000564634	HHIPL1	Q96JK4	782 aa		32.5	■■■□□ 2.79
CYLD-208	ENST00000564634	DBNDD1	Q9H9R9	158 aa		32.5	■■■□□ 2.79
CYLD-208	ENST00000564634		H7C1D1	291 aa		32.49	■■■□□ 2.79
CYLD-208	ENST00000564634	TMC4	Q7Z404	712 aa		32.49	■■■□□ 2.79
CYLD-208	ENST00000564634	USP48	Q86UV5	1035 aa		32.49	■■■□□ 2.79
CYLD-208	ENST00000564634	ELL2	O00472	640 aa	Predicted RBP	32.48	■■■□□ 2.79
CYLD-208	ENST00000564634	BRPF1	P55201	1214 aa	Predicted RBP	32.48	■■■□□ 2.79
CYLD-208	ENST00000564634	C8orf58	Q8NAV2	365 aa		32.48	■■■□□ 2.79
CYLD-208	ENST00000564634	CELF1	Q92879	486 aa	Known RBP	32.48	■■■□□ 2.79
CYLD-208	ENST00000564634	TSR2	Q969E8	191 aa	Known RBP	32.48	■■■□□ 2.79
CYLD-208	ENST00000564634	CHMP4A	Q9BY43	222 aa		32.48	■■■□□ 2.79
CYLD-208	ENST00000564634	DBF4	Q9UBU7	674 aa	Predicted RBP	32.48	■■■□□ 2.79
CYLD-208	ENST00000564634	ATP5J2-PTCD1	G3V325	749 aa		32.47	■■■□□ 2.79
CYLD-208	ENST00000564634	PSMD14	O00487	310 aa		32.47	■■■□□ 2.79
CYLD-208	ENST00000564634	RIMBP2	O15034	1052 aa		32.47	■■■□□ 2.79
CYLD-208	ENST00000564634	SAMD7	Q7Z3H4	446 aa		32.47	■■■□□ 2.79
CYLD-208	ENST00000564634	FAM89A	Q96GI7	184 aa		32.47	■■■□□ 2.79
CYLD-208	ENST00000564634	NSFL1C	Q9UNZ2	370 aa	Known RBP	32.47	■■■□□ 2.79
CYLD-208	ENST00000564634	CA12	O43570	354 aa		32.46	■■■□□ 2.79
CYLD-208	ENST00000564634	WASHC4	Q2M389	1173 aa		32.46	■■■□□ 2.79
CYLD-208	ENST00000564634	RTL5	Q5HYW3	569 aa	Predicted RBP	32.46	■■■□□ 2.79

Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms