RNA–Protein interactions for RNA: ENST00000564581.1

SUB1P3-201, Transcript of SUB1 homolog, transcriptional regulator pseudogene 3, humanhuman

BASIC

Gene SUB1P3, Length 315 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P3-201ENST00000564581 SHISA2Q6UWI4 295 aa5.41□□□□□ -1.54
SUB1P3-201ENST00000564581 FAM35AQ86V20 835 aa5.41□□□□□ -1.54
SUB1P3-201ENST00000564581 DMRTC2Q8IXT2 367 aaPredicted RBP5.41□□□□□ -1.54
SUB1P3-201ENST00000564581 MYO19Q96H55 970 aa5.41□□□□□ -1.54
SUB1P3-201ENST00000564581 MKNK1Q9BUB5 465 aa5.41□□□□□ -1.54
SUB1P3-201ENST00000564581 SEMA6BQ9H3T3 888 aa5.41□□□□□ -1.54
SUB1P3-201ENST00000564581 RARAP10276 462 aa5.4□□□□□ -1.54
SUB1P3-201ENST00000564581 OCLNQ16625 522 aa5.4□□□□□ -1.54
SUB1P3-201ENST00000564581 PERM1Q5SV97 790 aa5.4□□□□□ -1.54
SUB1P3-201ENST00000564581 DHX32Q7L7V1 743 aaKnown RBP5.4□□□□□ -1.54
SUB1P3-201ENST00000564581 TREML1Q86YW5 311 aa5.4□□□□□ -1.54
SUB1P3-201ENST00000564581 RGL4Q8IZJ4 473 aa5.4□□□□□ -1.54
SUB1P3-201ENST00000564581 CMTR1Q8N1G2 835 aaKnown RBP5.4□□□□□ -1.54
SUB1P3-201ENST00000564581 TPSG1Q9NRR2 321 aa5.4□□□□□ -1.54
SUB1P3-201ENST00000564581 RTCBQ9Y3I0 505 aaKnown RBP5.4□□□□□ -1.54
SUB1P3-201ENST00000564581 ARID3CA6NKF2 412 aa5.39□□□□□ -1.55
SUB1P3-201ENST00000564581 RGS9O75916 674 aaPredicted RBP5.39□□□□□ -1.55
SUB1P3-201ENST00000564581 SELPP16109 830 aa5.39□□□□□ -1.55
SUB1P3-201ENST00000564581 EPB42P16452 691 aa5.39□□□□□ -1.55
SUB1P3-201ENST00000564581 NAA30Q147X3 362 aaPredicted RBP5.39□□□□□ -1.55
SUB1P3-201ENST00000564581 GRIK5Q16478 980 aa5.39□□□□□ -1.55
SUB1P3-201ENST00000564581 ETFBKMTQ8IXQ9 262 aa5.39□□□□□ -1.55
SUB1P3-201ENST00000564581 LPIN3Q9BQK8 851 aa5.39□□□□□ -1.55
SUB1P3-201ENST00000564581 ACIN1Q9UKV3 1341 aaKnown RBP5.39□□□□□ -1.55
SUB1P3-201ENST00000564581 J3QW42 95 aa5.38□□□□□ -1.55
SUB1P3-201ENST00000564581 RSPO4Q2I0M5 234 aaPredicted RBP5.38□□□□□ -1.55
SUB1P3-201ENST00000564581 XP32Q5T750 250 aa5.38□□□□□ -1.55
SUB1P3-201ENST00000564581 TMEM164Q5U3C3 297 aa5.38□□□□□ -1.55
SUB1P3-201ENST00000564581 ZMYND15Q9H091 742 aa5.38□□□□□ -1.55
SUB1P3-201ENST00000564581 EFCC1Q9HA90 598 aa5.38□□□□□ -1.55
SUB1P3-201ENST00000564581 SLAIN2Q9P270 581 aa5.38□□□□□ -1.55
SUB1P3-201ENST00000564581 KCNMB2Q9Y691 235 aa5.38□□□□□ -1.55
SUB1P3-201ENST00000564581 XYLBO75191 536 aa5.37□□□□□ -1.55
SUB1P3-201ENST00000564581 MAP3K6O95382 1288 aa5.37□□□□□ -1.55
SUB1P3-201ENST00000564581 SWI5Q1ZZU3 235 aa5.37□□□□□ -1.55
SUB1P3-201ENST00000564581 ELMSAN1Q6PJG2 1045 aa5.37□□□□□ -1.55
SUB1P3-201ENST00000564581 ILDR2Q71H61 639 aa5.37□□□□□ -1.55
SUB1P3-201ENST00000564581 TRPM4Q8TD43 1214 aa5.37□□□□□ -1.55
SUB1P3-201ENST00000564581 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.37□□□□□ -1.55
SUB1P3-201ENST00000564581 MMP20O60882 483 aa5.36□□□□□ -1.55
SUB1P3-201ENST00000564581 ELOAQ14241 798 aaKnown RBP5.36□□□□□ -1.55
SUB1P3-201ENST00000564581 TRIP4Q15650 581 aaPredicted RBP5.36□□□□□ -1.55
SUB1P3-201ENST00000564581 NKAPLQ5M9Q1 402 aa5.36□□□□□ -1.55
SUB1P3-201ENST00000564581 MSL1Q68DK7 614 aa5.36□□□□□ -1.55
SUB1P3-201ENST00000564581 FMR1NBQ8N0W7 255 aaPredicted RBP5.36□□□□□ -1.55
SUB1P3-201ENST00000564581 SMG9Q9H0W8 520 aaKnown RBP5.36□□□□□ -1.55
SUB1P3-201ENST00000564581 CXXC1Q9P0U4 656 aaPredicted RBP5.36□□□□□ -1.55
SUB1P3-201ENST00000564581 TNFRSF10BO14763 440 aa5.35□□□□□ -1.55
SUB1P3-201ENST00000564581 ZBTB39O15060 712 aa5.35□□□□□ -1.55
SUB1P3-201ENST00000564581 ATG7O95352 703 aa5.35□□□□□ -1.55
SUB1P3-201ENST00000564581 ELNP15502 786 aa5.35□□□□□ -1.55
SUB1P3-201ENST00000564581 EIF2AK2P19525 551 aaKnown RBP5.35□□□□□ -1.55
SUB1P3-201ENST00000564581 SCNN1AP37088 669 aa5.35□□□□□ -1.55
SUB1P3-201ENST00000564581 RAC1P63000 192 aa5.35□□□□□ -1.55
SUB1P3-201ENST00000564581 GPLD1P80108 840 aa5.35□□□□□ -1.55
SUB1P3-201ENST00000564581 ADGRE1Q14246 886 aa5.35□□□□□ -1.55
SUB1P3-201ENST00000564581 MBTPS1Q14703 1052 aa5.35□□□□□ -1.55
SUB1P3-201ENST00000564581 C16orf46Q6P387 395 aa5.35□□□□□ -1.55
SUB1P3-201ENST00000564581 Q8N3U1 123 aa5.35□□□□□ -1.55
SUB1P3-201ENST00000564581 NSUN5Q96P11 429 aaKnown RBP5.35□□□□□ -1.55
SUB1P3-201ENST00000564581 NACC1Q96RE7 527 aa5.35□□□□□ -1.55
SUB1P3-201ENST00000564581 TLR7Q9NYK1 1049 aaKnown RBP5.35□□□□□ -1.55
SUB1P3-201ENST00000564581 C9orf172C9J069 976 aa5.34□□□□□ -1.55
SUB1P3-201ENST00000564581 EGFRP00533 1210 aa5.34□□□□□ -1.55
SUB1P3-201ENST00000564581 BRD2P25440 801 aaKnown RBP5.34□□□□□ -1.55
SUB1P3-201ENST00000564581 LENG1Q96BZ8 264 aaPredicted RBP5.34□□□□□ -1.55
SUB1P3-201ENST00000564581 USP21Q9UK80 565 aa5.34□□□□□ -1.55
SUB1P3-201ENST00000564581 LOC102724428A0A0B4J2F2 783 aa5.33□□□□□ -1.56
SUB1P3-201ENST00000564581 DYRK3O43781 588 aa5.33□□□□□ -1.56
SUB1P3-201ENST00000564581 NRLP54845 237 aa5.33□□□□□ -1.56
SUB1P3-201ENST00000564581 SIK1P57059 783 aa5.33□□□□□ -1.56
SUB1P3-201ENST00000564581 PCSK7Q16549 785 aa5.33□□□□□ -1.56
SUB1P3-201ENST00000564581 FOXD4L6Q3SYB3 417 aaPredicted RBP5.33□□□□□ -1.56
SUB1P3-201ENST00000564581 GDF6Q6KF10 455 aaPredicted RBP5.33□□□□□ -1.56
SUB1P3-201ENST00000564581 FOXD4L3Q6VB84 417 aaPredicted RBP5.33□□□□□ -1.56
SUB1P3-201ENST00000564581 WFDC8Q8IUA0 241 aa5.33□□□□□ -1.56
SUB1P3-201ENST00000564581 PLD4Q96BZ4 506 aa5.33□□□□□ -1.56
SUB1P3-201ENST00000564581 FRRS1LQ9P0K9 344 aa5.33□□□□□ -1.56
SUB1P3-201ENST00000564581 SEPT3Q9UH03 358 aa5.33□□□□□ -1.56
SUB1P3-201ENST00000564581 UBAP1LF5GYI3 381 aa5.32□□□□□ -1.56
SUB1P3-201ENST00000564581 DEAF1O75398 565 aaPredicted RBP5.32□□□□□ -1.56
SUB1P3-201ENST00000564581 PSAPP07602 524 aa5.32□□□□□ -1.56
SUB1P3-201ENST00000564581 NRG1Q02297 640 aaPredicted RBP5.32□□□□□ -1.56
SUB1P3-201ENST00000564581 ZMYM1Q5SVZ6 1142 aa5.32□□□□□ -1.56
SUB1P3-201ENST00000564581 COL13A1Q5TAT6 717 aaPredicted RBP5.32□□□□□ -1.56
SUB1P3-201ENST00000564581 TXNRD3Q86VQ6 643 aa5.32□□□□□ -1.56
SUB1P3-201ENST00000564581 FBXO11Q86XK2 927 aa5.32□□□□□ -1.56
SUB1P3-201ENST00000564581 GPR152Q8TDT2 470 aa5.32□□□□□ -1.56
SUB1P3-201ENST00000564581 PBXIP1Q96AQ6 731 aa5.32□□□□□ -1.56
SUB1P3-201ENST00000564581 CCDC97Q96F63 343 aaPredicted RBP5.32□□□□□ -1.56
SUB1P3-201ENST00000564581 C11orf16Q9NQ32 467 aa5.32□□□□□ -1.56
SUB1P3-201ENST00000564581 GHRHP01286 108 aa5.31□□□□□ -1.56
SUB1P3-201ENST00000564581 ZAP70P43403 619 aa5.31□□□□□ -1.56
SUB1P3-201ENST00000564581 IREB2P48200 963 aaKnown RBP5.31□□□□□ -1.56
SUB1P3-201ENST00000564581 PRSS36Q5K4E3 855 aa5.31□□□□□ -1.56
SUB1P3-201ENST00000564581 NLRP13Q86W25 1043 aa5.31□□□□□ -1.56
SUB1P3-201ENST00000564581 ATCAYQ86WG3 371 aa5.31□□□□□ -1.56
SUB1P3-201ENST00000564581 TTC9Q92623 222 aa5.31□□□□□ -1.56
SUB1P3-201ENST00000564581 CLP1Q92989 425 aaKnown RBP5.31□□□□□ -1.56
SUB1P3-201ENST00000564581 TP53INP1Q96A56 240 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms