RNA–Protein interactions for RNA: ENST00000564333.1

CCNF-204, Transcript of cyclin F, humanhuman

Gene CCNF, Length 1,937 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-204ENST00000564333 VPS53Q5VIR6 699 aa19.85■□□□□ 0.77
CCNF-204ENST00000564333 KIF6Q6ZMV9 814 aa19.85■□□□□ 0.77
CCNF-204ENST00000564333 ATG9AQ7Z3C6 839 aa19.85■□□□□ 0.77
CCNF-204ENST00000564333 CERKQ8TCT0 537 aa19.85■□□□□ 0.77
CCNF-204ENST00000564333 ZSWIM6Q9HCJ5 1215 aa19.85■□□□□ 0.77
CCNF-204ENST00000564333 ATG3Q9NT62 314 aa19.85■□□□□ 0.77
CCNF-204ENST00000564333 BCL9O00512 1426 aa19.85■□□□□ 0.77
CCNF-204ENST00000564333 ANP32BQ92688 251 aaKnown RBP19.84■□□□□ 0.77
CCNF-204ENST00000564333 DNAJC2Q99543 621 aaKnown RBP19.84■□□□□ 0.77
CCNF-204ENST00000564333 PDRG1Q9NUG6 133 aa19.84■□□□□ 0.77
CCNF-204ENST00000564333 CYP46A1Q9Y6A2 500 aa19.84■□□□□ 0.77
CCNF-204ENST00000564333 NRAPQ86VF7 1730 aa19.84■□□□□ 0.77
CCNF-204ENST00000564333 SPEF2Q9C093 1822 aa19.84■□□□□ 0.77
CCNF-204ENST00000564333 IL15P40933 162 aaPredicted RBP19.84■□□□□ 0.77
CCNF-204ENST00000564333 TCIRG1Q13488 830 aa19.84■□□□□ 0.77
CCNF-204ENST00000564333 HAUS7Q99871 368 aa19.84■□□□□ 0.77
CCNF-204ENST00000564333 SLC27A2O14975 620 aa19.83■□□□□ 0.77
CCNF-204ENST00000564333 ZNF589Q86UQ0 364 aaPredicted RBP19.83■□□□□ 0.77
CCNF-204ENST00000564333 GPR108Q9NPR9 543 aa19.83■□□□□ 0.77
CCNF-204ENST00000564333 STARD3NLO95772 234 aa19.82■□□□□ 0.76
CCNF-204ENST00000564333 WDR33Q9C0J8 1336 aaKnown RBP19.82■□□□□ 0.76
CCNF-204ENST00000564333 EYA2O00167 538 aa19.82■□□□□ 0.76
CCNF-204ENST00000564333 PRPF40AO75400 957 aaKnown RBP19.82■□□□□ 0.76
CCNF-204ENST00000564333 RNF20Q5VTR2 975 aa19.82■□□□□ 0.76
CCNF-204ENST00000564333 CHAMP1Q96JM3 812 aa19.82■□□□□ 0.76
CCNF-204ENST00000564333 LARP6Q9BRS8 491 aaKnown RBP19.82■□□□□ 0.76
CCNF-204ENST00000564333 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.82■□□□□ 0.76
CCNF-204ENST00000564333 NDUFB9Q9Y6M9 179 aa19.82■□□□□ 0.76
CCNF-204ENST00000564333 ESPNB1AK53 854 aa19.81■□□□□ 0.76
CCNF-204ENST00000564333 CIAO1O76071 339 aa19.81■□□□□ 0.76
CCNF-204ENST00000564333 CCDC173Q0VFZ6 552 aa19.81■□□□□ 0.76
CCNF-204ENST00000564333 GAS2L3Q86XJ1 694 aa19.81■□□□□ 0.76
CCNF-204ENST00000564333 PALLDQ8WX93 1383 aa19.81■□□□□ 0.76
CCNF-204ENST00000564333 LARGE1O95461 756 aa19.8■□□□□ 0.76
CCNF-204ENST00000564333 PSMA5P28066 241 aa19.8■□□□□ 0.76
CCNF-204ENST00000564333 ZNF594Q96JF6 807 aaPredicted RBP19.8■□□□□ 0.76
CCNF-204ENST00000564333 MYH3P11055 1940 aa19.8■□□□□ 0.76
CCNF-204ENST00000564333 PHLPP1O60346 1717 aa19.8■□□□□ 0.76
CCNF-204ENST00000564333 PRKCSHP14314 528 aaPredicted RBP19.8■□□□□ 0.76
CCNF-204ENST00000564333 NCLP19338 710 aaKnown RBP19.8■□□□□ 0.76
CCNF-204ENST00000564333 TRIM28Q13263 835 aaKnown RBP19.8■□□□□ 0.76
CCNF-204ENST00000564333 LRRC24Q50LG9 513 aa19.8■□□□□ 0.76
CCNF-204ENST00000564333 ZSCAN31Q96LW9 406 aaPredicted RBP19.8■□□□□ 0.76
CCNF-204ENST00000564333 NEUROD6Q96NK8 337 aa19.8■□□□□ 0.76
CCNF-204ENST00000564333 HMG20BQ9P0W2 317 aa19.8■□□□□ 0.76
CCNF-204ENST00000564333 MAP3K15Q6ZN16 1313 aa19.8■□□□□ 0.76
CCNF-204ENST00000564333 TAF5LO75529 589 aa19.79■□□□□ 0.76
CCNF-204ENST00000564333 PCCAP05165 728 aaPredicted RBP19.79■□□□□ 0.76
CCNF-204ENST00000564333 CAVIN1Q6NZI2 390 aaKnown RBP19.79■□□□□ 0.76
CCNF-204ENST00000564333 DDX46Q7L014 1031 aaKnown RBP19.79■□□□□ 0.76
CCNF-204ENST00000564333 SH2B1Q9NRF2 756 aaPredicted RBP19.79■□□□□ 0.76
CCNF-204ENST00000564333 CCDC9Q9Y3X0 531 aaKnown RBP19.79■□□□□ 0.76
CCNF-204ENST00000564333 KBTBD3Q8NAB2 608 aa19.78■□□□□ 0.76
CCNF-204ENST00000564333 GPT2Q8TD30 523 aa19.78■□□□□ 0.76
CCNF-204ENST00000564333 SMC3Q9UQE7 1217 aa19.78■□□□□ 0.76
CCNF-204ENST00000564333 NUP98P52948 1817 aa19.78■□□□□ 0.76
CCNF-204ENST00000564333 ZNF445P59923 1031 aa19.78■□□□□ 0.76
CCNF-204ENST00000564333 CCDC83Q8IWF9 413 aa19.78■□□□□ 0.76
CCNF-204ENST00000564333 SH3TC1Q8TE82 1336 aa19.78■□□□□ 0.76
CCNF-204ENST00000564333 EXOC5O00471 708 aa19.77■□□□□ 0.76
CCNF-204ENST00000564333 CCDC57Q2TAC2 916 aa19.77■□□□□ 0.76
CCNF-204ENST00000564333 PLA2G12BQ9BX93 195 aa19.77■□□□□ 0.76
CCNF-204ENST00000564333 USPL1Q5W0Q7 1092 aa19.76■□□□□ 0.75
CCNF-204ENST00000564333 BLOC1S2Q6QNY1 142 aa19.76■□□□□ 0.75
CCNF-204ENST00000564333 GIGYF2Q6Y7W6 1299 aaKnown RBP19.76■□□□□ 0.75
CCNF-204ENST00000564333 ZBTB38Q8NAP3 1195 aaPredicted RBP19.76■□□□□ 0.75
CCNF-204ENST00000564333 PPP1R9BQ96SB3 815 aa19.76■□□□□ 0.75
CCNF-204ENST00000564333 PUS3Q9BZE2 481 aaKnown RBP19.76■□□□□ 0.75
CCNF-204ENST00000564333 PAG1Q9NWQ8 432 aa19.76■□□□□ 0.75
CCNF-204ENST00000564333 A0A1B0GUL7 405 aa19.76■□□□□ 0.75
CCNF-204ENST00000564333 MBD3O95983 291 aa19.76■□□□□ 0.75
CCNF-204ENST00000564333 CYP19A1P11511 503 aaPredicted RBP19.76■□□□□ 0.75
CCNF-204ENST00000564333 TIMM10P62072 90 aa19.76■□□□□ 0.75
CCNF-204ENST00000564333 ZSCAN23Q3MJ62 389 aa19.76■□□□□ 0.75
CCNF-204ENST00000564333 CCDC129Q6ZRS4 1044 aa19.76■□□□□ 0.75
CCNF-204ENST00000564333 SLC4A9Q96Q91 983 aa19.76■□□□□ 0.75
CCNF-204ENST00000564333 KAT6BQ8WYB5 2073 aa19.75■□□□□ 0.75
CCNF-204ENST00000564333 CDHR2Q9BYE9 1310 aa19.75■□□□□ 0.75
CCNF-204ENST00000564333 UBAP1LF5GYI3 381 aa19.75■□□□□ 0.75
CCNF-204ENST00000564333 GOLIM4O00461 696 aa19.75■□□□□ 0.75
CCNF-204ENST00000564333 CHGBP05060 677 aa19.75■□□□□ 0.75
CCNF-204ENST00000564333 RPS6KB1P23443 525 aa19.75■□□□□ 0.75
CCNF-204ENST00000564333 NASPP49321 788 aaPredicted RBP19.75■□□□□ 0.75
CCNF-204ENST00000564333 TSGA10IPQ3SY00 556 aa19.75■□□□□ 0.75
CCNF-204ENST00000564333 MCMDC2Q4G0Z9 681 aa19.75■□□□□ 0.75
CCNF-204ENST00000564333 SYTL4Q96C24 671 aaPredicted RBP19.75■□□□□ 0.75
CCNF-204ENST00000564333 FAM89AQ96GI7 184 aa19.75■□□□□ 0.75
CCNF-204ENST00000564333 FBXO3Q9UK99 471 aa19.75■□□□□ 0.75
CCNF-204ENST00000564333 TAF6LQ9Y6J9 622 aa19.75■□□□□ 0.75
CCNF-204ENST00000564333 LAMA4Q16363 1823 aa19.74■□□□□ 0.75
CCNF-204ENST00000564333 ST3GAL1Q11201 340 aa19.74■□□□□ 0.75
CCNF-204ENST00000564333 ME3Q16798 604 aa19.74■□□□□ 0.75
CCNF-204ENST00000564333 HSP90AB3PQ58FF7 597 aa19.74■□□□□ 0.75
CCNF-204ENST00000564333 SEC62Q99442 399 aaKnown RBP19.74■□□□□ 0.75
CCNF-204ENST00000564333 ZBTB1Q9Y2K1 713 aa19.74■□□□□ 0.75
CCNF-204ENST00000564333 STX6O43752 255 aa19.74■□□□□ 0.75
CCNF-204ENST00000564333 ZSCAN22P10073 491 aaPredicted RBP19.74■□□□□ 0.75
CCNF-204ENST00000564333 HLFQ16534 295 aa19.74■□□□□ 0.75
CCNF-204ENST00000564333 CEP126Q9P2H0 1117 aa19.74■□□□□ 0.75
CCNF-204ENST00000564333 U3KPZ7 1027 aaPredicted RBP19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms