RNA–Protein interactions for RNA: ENST00000564317.5

CDH11-209, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-209ENST00000564317 A0A0G2JLW4 131 aa19.48■□□□□ 0.71
CDH11-209ENST00000564317 GNAI2P04899 355 aa19.48■□□□□ 0.71
CDH11-209ENST00000564317 CSF1RP07333 972 aa19.48■□□□□ 0.71
CDH11-209ENST00000564317 SRGNP10124 158 aa19.48■□□□□ 0.71
CDH11-209ENST00000564317 HSP90B1P14625 803 aaKnown RBP19.48■□□□□ 0.71
CDH11-209ENST00000564317 RABL6Q3YEC7 729 aaPredicted RBP19.48■□□□□ 0.71
CDH11-209ENST00000564317 ZBTB40Q9NUA8 1239 aa19.48■□□□□ 0.71
CDH11-209ENST00000564317 KCNA3P22001 575 aa19.47■□□□□ 0.71
CDH11-209ENST00000564317 TGFB2P61812 414 aa19.47■□□□□ 0.71
CDH11-209ENST00000564317 FAM161AQ3B820 660 aa19.47■□□□□ 0.71
CDH11-209ENST00000564317 LMBR1LQ6UX01 489 aa19.47■□□□□ 0.71
CDH11-209ENST00000564317 EXOC6Q8TAG9 804 aa19.47■□□□□ 0.71
CDH11-209ENST00000564317 GREM2Q9H772 168 aa19.47■□□□□ 0.71
CDH11-209ENST00000564317 H0YIN7 160 aa19.46■□□□□ 0.71
CDH11-209ENST00000564317 SYT17Q9BSW7 474 aa19.46■□□□□ 0.71
CDH11-209ENST00000564317 MYH3P11055 1940 aa19.46■□□□□ 0.71
CDH11-209ENST00000564317 DLEC1Q9Y238 1755 aa19.46■□□□□ 0.71
CDH11-209ENST00000564317 RTL9Q8NET4 1388 aa19.45■□□□□ 0.7
CDH11-209ENST00000564317 NPR1P16066 1061 aa19.45■□□□□ 0.7
CDH11-209ENST00000564317 HOXA10P31260 410 aaPredicted RBP19.45■□□□□ 0.7
CDH11-209ENST00000564317 CCDC152Q4G0S7 254 aa19.45■□□□□ 0.7
CDH11-209ENST00000564317 RPGRQ92834 1020 aaKnown RBP19.45■□□□□ 0.7
CDH11-209ENST00000564317 MASTLQ96GX5 879 aa19.45■□□□□ 0.7
CDH11-209ENST00000564317 SEC31BQ9NQW1 1179 aa19.45■□□□□ 0.7
CDH11-209ENST00000564317 PDZRN3Q9UPQ7 1066 aa19.45■□□□□ 0.7
CDH11-209ENST00000564317 STYK1Q6J9G0 422 aa19.44■□□□□ 0.7
CDH11-209ENST00000564317 ZNF622Q969S3 477 aaKnown RBP eCLIP19.44■□□□□ 0.7
CDH11-209ENST00000564317 HDAC5Q9UQL6 1122 aa19.44■□□□□ 0.7
CDH11-209ENST00000564317 CHMP3Q9Y3E7 222 aa19.44■□□□□ 0.7
CDH11-209ENST00000564317 RBM17Q96I25 401 aaKnown RBP19.43■□□□□ 0.7
CDH11-209ENST00000564317 CHMP4BQ9H444 224 aaKnown RBP19.43■□□□□ 0.7
CDH11-209ENST00000564317 WWC3Q9ULE0 1092 aa19.43■□□□□ 0.7
CDH11-209ENST00000564317 ITGA6P23229 1130 aa19.42■□□□□ 0.7
CDH11-209ENST00000564317 MTX1Q13505 466 aa19.42■□□□□ 0.7
CDH11-209ENST00000564317 CEP85Q6P2H3 762 aa19.42■□□□□ 0.7
CDH11-209ENST00000564317 DDX46Q7L014 1031 aaKnown RBP19.42■□□□□ 0.7
CDH11-209ENST00000564317 SLC51AQ86UW1 340 aa19.42■□□□□ 0.7
CDH11-209ENST00000564317 CELF1Q92879 486 aaKnown RBP19.42■□□□□ 0.7
CDH11-209ENST00000564317 CRAMP1Q96RY5 1269 aa19.42■□□□□ 0.7
CDH11-209ENST00000564317 RFX5P48382 616 aaPredicted RBP19.41■□□□□ 0.7
CDH11-209ENST00000564317 TAF1P21675 1872 aa19.41■□□□□ 0.7
CDH11-209ENST00000564317 BRCA1P38398 1863 aaKnown RBP19.41■□□□□ 0.7
CDH11-209ENST00000564317 PNMA6EA0A0J9YXQ4 647 aa19.4■□□□□ 0.7
CDH11-209ENST00000564317 GRAPQ13588 217 aa19.4■□□□□ 0.7
CDH11-209ENST00000564317 GRAPLQ8TC17 118 aaPredicted RBP19.4■□□□□ 0.7
CDH11-209ENST00000564317 ANKRD18BA2A2Z9 1011 aa19.39■□□□□ 0.69
CDH11-209ENST00000564317 ATP8B2P98198 1209 aa19.39■□□□□ 0.69
CDH11-209ENST00000564317 IFIT5Q13325 482 aaKnown RBP19.39■□□□□ 0.69
CDH11-209ENST00000564317 PRPF40BQ6NWY9 871 aaKnown RBP19.39■□□□□ 0.69
CDH11-209ENST00000564317 SIRT2Q8IXJ6 389 aa19.39■□□□□ 0.69
CDH11-209ENST00000564317 CNKSR1Q969H4 720 aa19.39■□□□□ 0.69
CDH11-209ENST00000564317 ZNF594Q96JF6 807 aaPredicted RBP19.39■□□□□ 0.69
CDH11-209ENST00000564317 PIM2Q9P1W9 311 aa19.39■□□□□ 0.69
CDH11-209ENST00000564317 PCDHB15Q9Y5E8 787 aa19.39■□□□□ 0.69
CDH11-209ENST00000564317 SRGAP3O43295 1099 aa19.38■□□□□ 0.69
CDH11-209ENST00000564317 CCDC57Q2TAC2 916 aa19.38■□□□□ 0.69
CDH11-209ENST00000564317 SLX4Q8IY92 1834 aa19.38■□□□□ 0.69
CDH11-209ENST00000564317 TTLL6Q8N841 843 aa19.38■□□□□ 0.69
CDH11-209ENST00000564317 KLHDC4Q8TBB5 520 aa19.38■□□□□ 0.69
CDH11-209ENST00000564317 PPEF1O14829 653 aaPredicted RBP19.37■□□□□ 0.69
CDH11-209ENST00000564317 ALDH1B1P30837 517 aa19.37■□□□□ 0.69
CDH11-209ENST00000564317 RPS8P62241 208 aaKnown RBP19.37■□□□□ 0.69
CDH11-209ENST00000564317 POLA2Q14181 598 aa19.37■□□□□ 0.69
CDH11-209ENST00000564317 CDC5LQ99459 802 aaKnown RBP19.37■□□□□ 0.69
CDH11-209ENST00000564317 CACNA1SQ13698 1873 aa19.37■□□□□ 0.69
CDH11-209ENST00000564317 DALRD3Q5D0E6 543 aaKnown RBP19.36■□□□□ 0.69
CDH11-209ENST00000564317 OLFM4Q6UX06 510 aa19.36■□□□□ 0.69
CDH11-209ENST00000564317 ANKRD18AQ8IVF6 992 aa19.36■□□□□ 0.69
CDH11-209ENST00000564317 RPAP2Q8IXW5 612 aaPredicted RBP19.36■□□□□ 0.69
CDH11-209ENST00000564317 SSH3Q8TE77 659 aa19.36■□□□□ 0.69
CDH11-209ENST00000564317 PA2G4Q9UQ80 394 aaKnown RBP19.36■□□□□ 0.69
CDH11-209ENST00000564317 SPEF2Q9C093 1822 aa19.35■□□□□ 0.69
CDH11-209ENST00000564317 PTPN12Q05209 780 aaKnown RBP19.35■□□□□ 0.69
CDH11-209ENST00000564317 C7orf43Q8WVR3 580 aa19.35■□□□□ 0.69
CDH11-209ENST00000564317 PUS3Q9BZE2 481 aaKnown RBP19.35■□□□□ 0.69
CDH11-209ENST00000564317 ZNF219Q9P2Y4 722 aaPredicted RBP19.35■□□□□ 0.69
CDH11-209ENST00000564317 LRRC37AA6NMS7 1700 aa19.34■□□□□ 0.69
CDH11-209ENST00000564317 BBOX1O75936 387 aa19.34■□□□□ 0.69
CDH11-209ENST00000564317 IGHMBP2P38935 993 aaKnown RBP19.34■□□□□ 0.69
CDH11-209ENST00000564317 AAMPQ13685 434 aa19.34■□□□□ 0.69
CDH11-209ENST00000564317 TAF7LQ5H9L4 462 aa19.34■□□□□ 0.69
CDH11-209ENST00000564317 BCS1LQ9Y276 419 aa19.34■□□□□ 0.69
CDH11-209ENST00000564317 NEFLP07196 543 aa19.33■□□□□ 0.68
CDH11-209ENST00000564317 COPRSQ9NQ92 184 aa19.33■□□□□ 0.68
CDH11-209ENST00000564317 ATP6V0A2Q9Y487 856 aa19.33■□□□□ 0.68
CDH11-209ENST00000564317 C21orf2O43822 256 aa19.32■□□□□ 0.68
CDH11-209ENST00000564317 LRRC24Q50LG9 513 aa19.32■□□□□ 0.68
CDH11-209ENST00000564317 MPHOSPH8Q99549 860 aa19.32■□□□□ 0.68
CDH11-209ENST00000564317 SIL1Q9H173 461 aa19.32■□□□□ 0.68
CDH11-209ENST00000564317 BSDC1Q9NW68 430 aaPredicted RBP19.32■□□□□ 0.68
CDH11-209ENST00000564317 SNED1Q8TER0 1413 aa19.32■□□□□ 0.68
CDH11-209ENST00000564317 YBX3P16989 372 aaKnown RBP eCLIP19.31■□□□□ 0.68
CDH11-209ENST00000564317 LDHAL6AQ6ZMR3 332 aa19.31■□□□□ 0.68
CDH11-209ENST00000564317 TMC4Q7Z404 712 aa19.31■□□□□ 0.68
CDH11-209ENST00000564317 SP8Q8IXZ3 490 aa19.31■□□□□ 0.68
CDH11-209ENST00000564317 SRCAPQ6ZRS2 3230 aa19.3■□□□□ 0.68
CDH11-209ENST00000564317 EYA2O00167 538 aa19.3■□□□□ 0.68
CDH11-209ENST00000564317 ATG9AQ7Z3C6 839 aa19.3■□□□□ 0.68
CDH11-209ENST00000564317 PELP1Q8IZL8 1130 aaKnown RBP19.3■□□□□ 0.68
CDH11-209ENST00000564317 CNNM1Q9NRU3 951 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms