RNA–Protein interactions for RNA: ENST00000563941.5

MSLN-205, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-205ENST00000563941 CCDC183Q5T5S1 534 aa23.89■■□□□ 1.41
MSLN-205ENST00000563941 HMG20BQ9P0W2 317 aa23.88■■□□□ 1.41
MSLN-205ENST00000563941 TAF6LQ9Y6J9 622 aa23.88■■□□□ 1.41
MSLN-205ENST00000563941 RPS6KB1P23443 525 aa23.87■■□□□ 1.41
MSLN-205ENST00000563941 TAF5LO75529 589 aa23.87■■□□□ 1.41
MSLN-205ENST00000563941 ANKRD1Q15327 319 aa23.87■■□□□ 1.41
MSLN-205ENST00000563941 RFX7Q2KHR2 1363 aa23.86■■□□□ 1.41
MSLN-205ENST00000563941 DBNDD2Q9BQY9 259 aa23.86■■□□□ 1.41
MSLN-205ENST00000563941 VPS37CA5D8V6 355 aaPredicted RBP23.86■■□□□ 1.41
MSLN-205ENST00000563941 NBPF26B4DH59 902 aa23.86■■□□□ 1.41
MSLN-205ENST00000563941 DNM1Q05193 864 aaKnown RBP23.86■■□□□ 1.41
MSLN-205ENST00000563941 TSGA10IPQ3SY00 556 aa23.86■■□□□ 1.41
MSLN-205ENST00000563941 NBPF14Q5TI25 921 aa23.86■■□□□ 1.41
MSLN-205ENST00000563941 NBPF10Q6P3W6 841 aaKnown RBP23.86■■□□□ 1.41
MSLN-205ENST00000563941 LMBR1LQ6UX01 489 aa23.86■■□□□ 1.41
MSLN-205ENST00000563941 NBPF15Q8N660 670 aa23.86■■□□□ 1.41
MSLN-205ENST00000563941 TCEANC2Q96MN5 208 aa23.86■■□□□ 1.41
MSLN-205ENST00000563941 ALDH8A1Q9H2A2 487 aaPredicted RBP23.86■■□□□ 1.41
MSLN-205ENST00000563941 NDUFB9Q9Y6M9 179 aa23.86■■□□□ 1.41
MSLN-205ENST00000563941 CSPP1Q1MSJ5 1256 aa23.85■■□□□ 1.41
MSLN-205ENST00000563941 NOL7Q9UMY1 257 aaKnown RBP23.85■■□□□ 1.41
MSLN-205ENST00000563941 UBR2Q8IWV8 1755 aa23.85■■□□□ 1.41
MSLN-205ENST00000563941 NUP188Q5SRE5 1749 aa23.85■■□□□ 1.41
MSLN-205ENST00000563941 TPRNQ4KMQ1 711 aa23.84■■□□□ 1.41
MSLN-205ENST00000563941 USPL1Q5W0Q7 1092 aa23.84■■□□□ 1.41
MSLN-205ENST00000563941 DNAJC2Q99543 621 aaKnown RBP23.84■■□□□ 1.41
MSLN-205ENST00000563941 PCDH11XQ9BZA7 1347 aa23.84■■□□□ 1.41
MSLN-205ENST00000563941 PCDH11YQ9BZA8 1340 aa23.84■■□□□ 1.41
MSLN-205ENST00000563941 TOB2Q14106 344 aaPredicted RBP23.84■■□□□ 1.41
MSLN-205ENST00000563941 ZNF609O15014 1411 aa23.84■■□□□ 1.41
MSLN-205ENST00000563941 H7C1W4 665 aa23.83■■□□□ 1.41
MSLN-205ENST00000563941 FOXO4P98177 505 aa23.83■■□□□ 1.41
MSLN-205ENST00000563941 HAUS7Q99871 368 aa23.83■■□□□ 1.41
MSLN-205ENST00000563941 LETM1O95202 739 aaPredicted RBP23.83■■□□□ 1.4
MSLN-205ENST00000563941 LARP1BQ659C4 914 aaKnown RBP23.83■■□□□ 1.4
MSLN-205ENST00000563941 ZCRB1Q8TBF4 217 aaKnown RBP23.83■■□□□ 1.4
MSLN-205ENST00000563941 CHMP3Q9Y3E7 222 aa23.83■■□□□ 1.4
MSLN-205ENST00000563941 WDR17Q8IZU2 1322 aa23.82■■□□□ 1.4
MSLN-205ENST00000563941 KDM4FA0A1W2PPD8 638 aa23.82■■□□□ 1.4
MSLN-205ENST00000563941 TJP1Q07157 1748 aa23.82■■□□□ 1.4
MSLN-205ENST00000563941 PDIA4P13667 645 aaKnown RBP23.81■■□□□ 1.4
MSLN-205ENST00000563941 TTLL7Q6ZT98 887 aa23.81■■□□□ 1.4
MSLN-205ENST00000563941 FAM184AQ8NB25 1140 aa23.81■■□□□ 1.4
MSLN-205ENST00000563941 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.81■■□□□ 1.4
MSLN-205ENST00000563941 KRT32Q14532 448 aa23.81■■□□□ 1.4
MSLN-205ENST00000563941 TOM1L2Q6ZVM7 507 aa23.81■■□□□ 1.4
MSLN-205ENST00000563941 PRDM11Q9NQV5 511 aa23.81■■□□□ 1.4
MSLN-205ENST00000563941 CCDC39Q9UFE4 941 aa23.81■■□□□ 1.4
MSLN-205ENST00000563941 CCDC129Q6ZRS4 1044 aa23.8■■□□□ 1.4
MSLN-205ENST00000563941 DDX46Q7L014 1031 aaKnown RBP23.8■■□□□ 1.4
MSLN-205ENST00000563941 CWC25Q9NXE8 425 aaPredicted RBP23.8■■□□□ 1.4
MSLN-205ENST00000563941 XIRP1Q702N8 1843 aaKnown RBP23.8■■□□□ 1.4
MSLN-205ENST00000563941 KCPQ6ZWJ8 1503 aa23.8■■□□□ 1.4
MSLN-205ENST00000563941 CHGBP05060 677 aa23.8■■□□□ 1.4
MSLN-205ENST00000563941 PDCP20941 246 aa23.8■■□□□ 1.4
MSLN-205ENST00000563941 CDC37L1Q7L3B6 337 aa23.8■■□□□ 1.4
MSLN-205ENST00000563941 PAPPAQ13219 1627 aa23.79■■□□□ 1.4
MSLN-205ENST00000563941 ERVV-2B6SEH9 535 aa23.79■■□□□ 1.4
MSLN-205ENST00000563941 MCMDC2Q4G0Z9 681 aa23.79■■□□□ 1.4
MSLN-205ENST00000563941 BRINP3Q76B58 766 aa23.79■■□□□ 1.4
MSLN-205ENST00000563941 SEC62Q99442 399 aaKnown RBP23.79■■□□□ 1.4
MSLN-205ENST00000563941 ZKSCAN5Q9Y2L8 839 aa23.79■■□□□ 1.4
MSLN-205ENST00000563941 U3KPZ7 1027 aaPredicted RBP23.79■■□□□ 1.4
MSLN-205ENST00000563941 ATG9AQ7Z3C6 839 aa23.78■■□□□ 1.4
MSLN-205ENST00000563941 A1BGP04217 495 aa23.78■■□□□ 1.4
MSLN-205ENST00000563941 UVSSAQ2YD98 709 aa23.78■■□□□ 1.4
MSLN-205ENST00000563941 CCDC9Q9Y3X0 531 aaKnown RBP23.78■■□□□ 1.4
MSLN-205ENST00000563941 KBTBD3Q8NAB2 608 aa23.77■■□□□ 1.4
MSLN-205ENST00000563941 NEK1Q96PY6 1258 aa23.77■■□□□ 1.4
MSLN-205ENST00000563941 ZNF500O60304 480 aaPredicted RBP23.77■■□□□ 1.4
MSLN-205ENST00000563941 STK3Q13188 491 aa23.77■■□□□ 1.4
MSLN-205ENST00000563941 COL5A2P05997 1499 aaPredicted RBP23.76■■□□□ 1.39
MSLN-205ENST00000563941 STRCQ7RTU9 1775 aa23.76■■□□□ 1.39
MSLN-205ENST00000563941 OFD1O75665 1012 aa23.76■■□□□ 1.39
MSLN-205ENST00000563941 FERMT3Q86UX7 667 aa23.76■■□□□ 1.39
MSLN-205ENST00000563941 NEUROD6Q96NK8 337 aa23.76■■□□□ 1.39
MSLN-205ENST00000563941 ZBTB3Q9H5J0 574 aa23.76■■□□□ 1.39
MSLN-205ENST00000563941 PALLDQ8WX93 1383 aa23.76■■□□□ 1.39
MSLN-205ENST00000563941 KRT85P78386 507 aa23.75■■□□□ 1.39
MSLN-205ENST00000563941 GPR108Q9NPR9 543 aa23.75■■□□□ 1.39
MSLN-205ENST00000563941 SH3TC1Q8TE82 1336 aa23.75■■□□□ 1.39
MSLN-205ENST00000563941 CYP21A2P08686 494 aa23.75■■□□□ 1.39
MSLN-205ENST00000563941 MCM5P33992 734 aa23.75■■□□□ 1.39
MSLN-205ENST00000563941 NKX1-1Q15270 411 aaPredicted RBP23.75■■□□□ 1.39
MSLN-205ENST00000563941 SHANK3Q9BYB0 1731 aa23.74■■□□□ 1.39
MSLN-205ENST00000563941 HCLS1P14317 486 aaPredicted RBP23.74■■□□□ 1.39
MSLN-205ENST00000563941 IL15P40933 162 aaPredicted RBP23.74■■□□□ 1.39
MSLN-205ENST00000563941 CCDC191Q8NCU4 936 aa23.74■■□□□ 1.39
MSLN-205ENST00000563941 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.74■■□□□ 1.39
MSLN-205ENST00000563941 TTC6Q86TZ1 520 aa23.74■■□□□ 1.39
MSLN-205ENST00000563941 KLHL34Q8N239 644 aa23.74■■□□□ 1.39
MSLN-205ENST00000563941 PAG1Q9NWQ8 432 aa23.74■■□□□ 1.39
MSLN-205ENST00000563941 GOLIM4O00461 696 aa23.73■■□□□ 1.39
MSLN-205ENST00000563941 GIMAP6Q6P9H5 292 aa23.73■■□□□ 1.39
MSLN-205ENST00000563941 GTF3C6Q969F1 213 aa23.73■■□□□ 1.39
MSLN-205ENST00000563941 IL2RBP14784 551 aa23.72■■□□□ 1.39
MSLN-205ENST00000563941 TIMM10P62072 90 aa23.72■■□□□ 1.39
MSLN-205ENST00000563941 FAM173BQ6P4H8 233 aa23.72■■□□□ 1.39
MSLN-205ENST00000563941 Q6ZUG5 572 aa23.72■■□□□ 1.39
MSLN-205ENST00000563941 FUCA2Q9BTY2 467 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms