RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 GDF15Q99988 308 aa15.27■□□□□ 0.04
HDGFL3-204ENST00000563790 ZBTB12Q9Y330 459 aaPredicted RBP15.27■□□□□ 0.04
HDGFL3-204ENST00000563790 ALDH1B1P30837 517 aa15.26■□□□□ 0.03
HDGFL3-204ENST00000563790 TJAP1Q5JTD0 557 aa15.26■□□□□ 0.03
HDGFL3-204ENST00000563790 CD99L2Q8TCZ2 262 aa15.26■□□□□ 0.03
HDGFL3-204ENST00000563790 SETDB2Q96T68 719 aa15.26■□□□□ 0.03
HDGFL3-204ENST00000563790 BCL2L13Q9BXK5 485 aa15.26■□□□□ 0.03
HDGFL3-204ENST00000563790 CNOT7Q9UIV1 285 aaKnown RBP15.26■□□□□ 0.03
HDGFL3-204ENST00000563790 HCN4Q9Y3Q4 1203 aa15.26■□□□□ 0.03
HDGFL3-204ENST00000563790 SHTN1A0MZ66 631 aa15.25■□□□□ 0.03
HDGFL3-204ENST00000563790 H7C1D1 291 aa15.25■□□□□ 0.03
HDGFL3-204ENST00000563790 GRIPAP1Q4V328 841 aa15.25■□□□□ 0.03
HDGFL3-204ENST00000563790 MAFAQ8NHW3 353 aaPredicted RBP15.25■□□□□ 0.03
HDGFL3-204ENST00000563790 DCPSQ96C86 337 aaKnown RBP15.25■□□□□ 0.03
HDGFL3-204ENST00000563790 WDFY4Q6ZS81 3184 aa15.24■□□□□ 0.03
HDGFL3-204ENST00000563790 IRS2Q9Y4H2 1338 aa15.24■□□□□ 0.03
HDGFL3-204ENST00000563790 POTEB2H3BUK9 544 aa15.24■□□□□ 0.03
HDGFL3-204ENST00000563790 TERF2IPQ9NYB0 399 aa15.24■□□□□ 0.03
HDGFL3-204ENST00000563790 ZNRF3Q9ULT6 936 aa15.24■□□□□ 0.03
HDGFL3-204ENST00000563790 A0A087WZG4 1122 aa15.23■□□□□ 0.03
HDGFL3-204ENST00000563790 EIF5P55010 431 aaKnown RBP15.23■□□□□ 0.03
HDGFL3-204ENST00000563790 CDCA5Q96FF9 252 aa15.23■□□□□ 0.03
HDGFL3-204ENST00000563790 SLC12A5Q9H2X9 1139 aa15.23■□□□□ 0.03
HDGFL3-204ENST00000563790 MYCP01106 439 aaPredicted RBP15.22■□□□□ 0.03
HDGFL3-204ENST00000563790 CAP1Q01518 475 aa15.22■□□□□ 0.03
HDGFL3-204ENST00000563790 NCBP3Q53F19 620 aaKnown RBP15.22■□□□□ 0.03
HDGFL3-204ENST00000563790 TMC1Q8TDI8 760 aa15.22■□□□□ 0.03
HDGFL3-204ENST00000563790 UBR2Q8IWV8 1755 aa15.21■□□□□ 0.03
HDGFL3-204ENST00000563790 PPIP5K2O43314 1243 aa15.21■□□□□ 0.03
HDGFL3-204ENST00000563790 EVI5O60447 810 aa15.21■□□□□ 0.03
HDGFL3-204ENST00000563790 MICALL2Q8IY33 904 aa15.21■□□□□ 0.03
HDGFL3-204ENST00000563790 TDHQ8IZJ6 230 aa15.21■□□□□ 0.03
HDGFL3-204ENST00000563790 PTCH2Q9Y6C5 1203 aa15.21■□□□□ 0.03
HDGFL3-204ENST00000563790 SULF1Q8IWU6 871 aa15.2■□□□□ 0.02
HDGFL3-204ENST00000563790 NFATC2IPQ8NCF5 419 aa15.2■□□□□ 0.02
HDGFL3-204ENST00000563790 VPS33BQ9H267 617 aa15.2■□□□□ 0.02
HDGFL3-204ENST00000563790 SSC5DA1L4H1 1573 aa15.19■□□□□ 0.02
HDGFL3-204ENST00000563790 EPG5Q9HCE0 2579 aa15.19■□□□□ 0.02
HDGFL3-204ENST00000563790 TNIP1Q15025 636 aa15.19■□□□□ 0.02
HDGFL3-204ENST00000563790 AOC3Q16853 763 aa15.19■□□□□ 0.02
HDGFL3-204ENST00000563790 MYO9BQ13459 2157 aa15.19■□□□□ 0.02
HDGFL3-204ENST00000563790 USP34Q70CQ2 3546 aa15.18■□□□□ 0.02
HDGFL3-204ENST00000563790 EGFRP00533 1210 aa15.18■□□□□ 0.02
HDGFL3-204ENST00000563790 CANXP27824 592 aaKnown RBP15.18■□□□□ 0.02
HDGFL3-204ENST00000563790 C1QBPQ07021 282 aaKnown RBP15.18■□□□□ 0.02
HDGFL3-204ENST00000563790 NKX2-3Q8TAU0 364 aa15.18■□□□□ 0.02
HDGFL3-204ENST00000563790 C1QTNF1Q9BXJ1 281 aa15.18■□□□□ 0.02
HDGFL3-204ENST00000563790 ZSWIM8A7E2V4 1837 aa15.17■□□□□ 0.02
HDGFL3-204ENST00000563790 KIF20BQ96Q89 1820 aa15.17■□□□□ 0.02
HDGFL3-204ENST00000563790 DNAH12Q6ZR08 3092 aa15.17■□□□□ 0.02
HDGFL3-204ENST00000563790 POTEHQ6S545 545 aa15.17■□□□□ 0.02
HDGFL3-204ENST00000563790 C5orf42Q9H799 3197 aa15.17■□□□□ 0.02
HDGFL3-204ENST00000563790 MKRN3Q13064 507 aaKnown RBP15.16■□□□□ 0.02
HDGFL3-204ENST00000563790 TBC1D10BQ4KMP7 808 aaPredicted RBP15.16■□□□□ 0.02
HDGFL3-204ENST00000563790 MOB2Q70IA6 237 aa15.16■□□□□ 0.02
HDGFL3-204ENST00000563790 NBPF5PQ86XG9 351 aaPredicted RBP15.16■□□□□ 0.02
HDGFL3-204ENST00000563790 DPF2Q92785 391 aa15.16■□□□□ 0.02
HDGFL3-204ENST00000563790 EYA1Q99502 592 aa15.16■□□□□ 0.02
HDGFL3-204ENST00000563790 COL2A1P02458 1487 aaPredicted RBP15.15■□□□□ 0.02
HDGFL3-204ENST00000563790 UBE2Q2LH0YL09 131 aa15.15■□□□□ 0.02
HDGFL3-204ENST00000563790 RAD17O75943 681 aa15.15■□□□□ 0.02
HDGFL3-204ENST00000563790 SP3Q02447 781 aa15.15■□□□□ 0.02
HDGFL3-204ENST00000563790 IFNL1Q8IU54 200 aa15.15■□□□□ 0.02
HDGFL3-204ENST00000563790 FAM161BQ96MY7 647 aa15.15■□□□□ 0.02
HDGFL3-204ENST00000563790 TBC1D2BQ9UPU7 963 aa15.15■□□□□ 0.02
HDGFL3-204ENST00000563790 TCF20Q9UGU0 1960 aaKnown RBP15.15■□□□□ 0.02
HDGFL3-204ENST00000563790 NPM3O75607 178 aaKnown RBP15.14■□□□□ 0.01
HDGFL3-204ENST00000563790 GJA8P48165 433 aa15.14■□□□□ 0.01
HDGFL3-204ENST00000563790 SH3TC2Q8TF17 1288 aa15.14■□□□□ 0.01
HDGFL3-204ENST00000563790 CDX2Q99626 313 aaPredicted RBP15.14■□□□□ 0.01
HDGFL3-204ENST00000563790 MRE11P49959 708 aa15.13■□□□□ 0.01
HDGFL3-204ENST00000563790 INHBEP58166 350 aa15.13■□□□□ 0.01
HDGFL3-204ENST00000563790 GGA3Q9NZ52 723 aa15.13■□□□□ 0.01
HDGFL3-204ENST00000563790 PRAMEF22A3QJZ6 481 aa15.12■□□□□ 0.01
HDGFL3-204ENST00000563790 RAB3GAP2Q9H2M9 1393 aa15.11■□□□□ 0.01
HDGFL3-204ENST00000563790 ST20-MTHFSA0A0A6YYL1 179 aa15.11■□□□□ 0.01
HDGFL3-204ENST00000563790 FARP2O94887 1054 aaPredicted RBP15.11■□□□□ 0.01
HDGFL3-204ENST00000563790 CAMTA2O94983 1202 aa15.11■□□□□ 0.01
HDGFL3-204ENST00000563790 MTHFSP49914 203 aa15.11■□□□□ 0.01
HDGFL3-204ENST00000563790 ARHGEF6Q15052 776 aa15.11■□□□□ 0.01
HDGFL3-204ENST00000563790 CRY2Q49AN0 593 aa15.11■□□□□ 0.01
HDGFL3-204ENST00000563790 ATRXP46100 2492 aa15.11■□□□□ 0.01
HDGFL3-204ENST00000563790 KMT2BQ9UMN6 2715 aaPredicted RBP15.11■□□□□ 0.01
HDGFL3-204ENST00000563790 DDX60Q8IY21 1712 aaKnown RBP15.1■□□□□ 0.01
HDGFL3-204ENST00000563790 MTFR1Q15390 333 aa15.1■□□□□ 0.01
HDGFL3-204ENST00000563790 VSIG10Q8N0Z9 540 aa15.1■□□□□ 0.01
HDGFL3-204ENST00000563790 REV3LO60673 3130 aa15.09■□□□□ 0.01
HDGFL3-204ENST00000563790 MANSC4A6NHS7 340 aaPredicted RBP15.09■□□□□ 0.01
HDGFL3-204ENST00000563790 IGF2BP3O00425 579 aaKnown RBP eCLIP15.09■□□□□ 0.01
HDGFL3-204ENST00000563790 GJB1P08034 283 aa15.09■□□□□ 0.01
HDGFL3-204ENST00000563790 CRHR2Q13324 411 aa15.09■□□□□ 0.01
HDGFL3-204ENST00000563790 SPRYD7Q5W111 196 aa15.09■□□□□ 0.01
HDGFL3-204ENST00000563790 SLC51AQ86UW1 340 aa15.09■□□□□ 0.01
HDGFL3-204ENST00000563790 FOXK2Q01167 660 aa15.08■□□□□ 0
HDGFL3-204ENST00000563790 ZNF697Q5TEC3 545 aa15.08■□□□□ 0
HDGFL3-204ENST00000563790 ZNF530Q6P9A1 599 aaPredicted RBP15.08■□□□□ 0
HDGFL3-204ENST00000563790 TPTE2Q6XPS3 522 aa15.08■□□□□ 0
HDGFL3-204ENST00000563790 LRFN3Q9BTN0 628 aa15.08■□□□□ 0
HDGFL3-204ENST00000563790 YDJCA8MPS7 323 aa15.07■□□□□ 0
HDGFL3-204ENST00000563790 TCIRG1Q13488 830 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms