RNA–Protein interactions for RNA: ENST00000563709.1

NR2E3-201, Transcript of nuclear receptor subfamily 2 group E member 3, humanhuman

TSL 2

Gene NR2E3, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR2E3-201ENST00000563709 ADH1BP00325 375 aa7.08□□□□□ -1.28
NR2E3-201ENST00000563709 NPM2Q86SE8 214 aaKnown RBP7.08□□□□□ -1.28
NR2E3-201ENST00000563709 VSIG10Q8N0Z9 540 aa7.08□□□□□ -1.28
NR2E3-201ENST00000563709 NFATC2IPQ8NCF5 419 aa7.08□□□□□ -1.28
NR2E3-201ENST00000563709 PNISRQ8TF01 805 aaKnown RBP7.08□□□□□ -1.28
NR2E3-201ENST00000563709 FMNL2Q96PY5 1086 aa7.08□□□□□ -1.28
NR2E3-201ENST00000563709 MRS2Q9HD23 443 aa7.08□□□□□ -1.28
NR2E3-201ENST00000563709 TTC24A2A3L6 582 aaPredicted RBP7.07□□□□□ -1.28
NR2E3-201ENST00000563709 BTBD11A6QL63 1104 aa7.07□□□□□ -1.28
NR2E3-201ENST00000563709 ZBTB7AO95365 584 aa7.07□□□□□ -1.28
NR2E3-201ENST00000563709 KCNQ4P56696 695 aa7.07□□□□□ -1.28
NR2E3-201ENST00000563709 CALD1Q05682 793 aaKnown RBP7.07□□□□□ -1.28
NR2E3-201ENST00000563709 LINC00116Q8NCU8 138 aa7.07□□□□□ -1.28
NR2E3-201ENST00000563709 IRF7Q92985 503 aa7.07□□□□□ -1.28
NR2E3-201ENST00000563709 RUNDC1Q96C34 613 aa7.07□□□□□ -1.28
NR2E3-201ENST00000563709 PHACTR3Q96KR7 559 aa7.07□□□□□ -1.28
NR2E3-201ENST00000563709 PLEKHF1Q96S99 279 aa7.07□□□□□ -1.28
NR2E3-201ENST00000563709 SLC6A16Q9GZN6 736 aa7.07□□□□□ -1.28
NR2E3-201ENST00000563709 RTCBQ9Y3I0 505 aaKnown RBP7.07□□□□□ -1.28
NR2E3-201ENST00000563709 HEG1Q9ULI3 1381 aa7.07□□□□□ -1.28
NR2E3-201ENST00000563709 UBR2Q8IWV8 1755 aa7.06□□□□□ -1.28
NR2E3-201ENST00000563709 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.06□□□□□ -1.28
NR2E3-201ENST00000563709 STARD3NLO95772 234 aa7.06□□□□□ -1.28
NR2E3-201ENST00000563709 CRKLP46109 303 aaKnown RBP7.06□□□□□ -1.28
NR2E3-201ENST00000563709 ITPK1Q13572 414 aa7.06□□□□□ -1.28
NR2E3-201ENST00000563709 RC3H1Q5TC82 1133 aaKnown RBP7.06□□□□□ -1.28
NR2E3-201ENST00000563709 ZNF790Q6PG37 636 aa7.06□□□□□ -1.28
NR2E3-201ENST00000563709 MCM10Q7L590 875 aa7.06□□□□□ -1.28
NR2E3-201ENST00000563709 TEX13AQ9BXU3 409 aaPredicted RBP7.06□□□□□ -1.28
NR2E3-201ENST00000563709 LGR6Q9HBX8 967 aa7.06□□□□□ -1.28
NR2E3-201ENST00000563709 CCDC87Q9NVE4 849 aa7.06□□□□□ -1.28
NR2E3-201ENST00000563709 NXF1Q9UBU9 619 aaKnown RBP7.06□□□□□ -1.28
NR2E3-201ENST00000563709 TJP1Q07157 1748 aa7.06□□□□□ -1.28
NR2E3-201ENST00000563709 COL15A1P39059 1388 aa7.06□□□□□ -1.28
NR2E3-201ENST00000563709 COL5A3P25940 1745 aaPredicted RBP7.05□□□□□ -1.28
NR2E3-201ENST00000563709 RIPK4P57078 832 aa7.05□□□□□ -1.28
NR2E3-201ENST00000563709 SLC39A6Q13433 755 aa7.05□□□□□ -1.28
NR2E3-201ENST00000563709 CCDC146Q8IYE0 955 aa7.05□□□□□ -1.28
NR2E3-201ENST00000563709 IL17REQ8NFR9 667 aa7.05□□□□□ -1.28
NR2E3-201ENST00000563709 KIFC2Q96AC6 838 aa7.05□□□□□ -1.28
NR2E3-201ENST00000563709 KAT6BQ8WYB5 2073 aa7.05□□□□□ -1.28
NR2E3-201ENST00000563709 TAF1LQ8IZX4 1826 aa7.04□□□□□ -1.28
NR2E3-201ENST00000563709 TUBGCP6Q96RT7 1819 aa7.04□□□□□ -1.28
NR2E3-201ENST00000563709 CD2BP2O95400 341 aaKnown RBP7.04□□□□□ -1.28
NR2E3-201ENST00000563709 RFC4P35249 363 aa7.04□□□□□ -1.28
NR2E3-201ENST00000563709 TMPOP42166 694 aaKnown RBP7.04□□□□□ -1.28
NR2E3-201ENST00000563709 RPIAP49247 311 aa7.04□□□□□ -1.28
NR2E3-201ENST00000563709 CAMK2BQ13554 666 aa7.04□□□□□ -1.28
NR2E3-201ENST00000563709 TAF7Q15545 349 aaPredicted RBP7.04□□□□□ -1.28
NR2E3-201ENST00000563709 DNAJC10Q8IXB1 793 aa7.04□□□□□ -1.28
NR2E3-201ENST00000563709 ARXQ96QS3 562 aa7.04□□□□□ -1.28
NR2E3-201ENST00000563709 TSPYL4Q9UJ04 414 aa7.04□□□□□ -1.28
NR2E3-201ENST00000563709 SIPA1L3O60292 1781 aaPredicted RBP7.04□□□□□ -1.28
NR2E3-201ENST00000563709 SOS1Q07889 1333 aaPredicted RBP7.03□□□□□ -1.28
NR2E3-201ENST00000563709 UBR3Q6ZT12 1888 aa7.03□□□□□ -1.28
NR2E3-201ENST00000563709 A0A087WZG4 1122 aa7.03□□□□□ -1.28
NR2E3-201ENST00000563709 RPS6KA4O75676 772 aa7.03□□□□□ -1.28
NR2E3-201ENST00000563709 SNRPA1P09661 255 aaKnown RBP7.03□□□□□ -1.28
NR2E3-201ENST00000563709 KCNMA1Q12791 1236 aa7.03□□□□□ -1.28
NR2E3-201ENST00000563709 DCTN1Q14203 1278 aa7.03□□□□□ -1.28
NR2E3-201ENST00000563709 TRAPPC3LQ5T215 181 aa7.03□□□□□ -1.28
NR2E3-201ENST00000563709 MSL1Q68DK7 614 aa7.03□□□□□ -1.28
NR2E3-201ENST00000563709 COL23A1Q86Y22 540 aaPredicted RBP7.03□□□□□ -1.28
NR2E3-201ENST00000563709 ZNF496Q96IT1 587 aaPredicted RBP7.03□□□□□ -1.28
NR2E3-201ENST00000563709 SLC4A9Q96Q91 983 aa7.03□□□□□ -1.28
NR2E3-201ENST00000563709 BABAM1Q9NWV8 329 aa7.03□□□□□ -1.28
NR2E3-201ENST00000563709 ADAMTS8Q9UP79 889 aa7.03□□□□□ -1.28
NR2E3-201ENST00000563709 SCN7AQ01118 1682 aa7.03□□□□□ -1.28
NR2E3-201ENST00000563709 LAMB4A4D0S4 1761 aa7.03□□□□□ -1.28
NR2E3-201ENST00000563709 USP42Q9H9J4 1324 aaKnown RBP7.02□□□□□ -1.28
NR2E3-201ENST00000563709 CYP19A1P11511 503 aaPredicted RBP7.02□□□□□ -1.29
NR2E3-201ENST00000563709 NEUROD2Q15784 382 aa7.02□□□□□ -1.29
NR2E3-201ENST00000563709 PDGFDQ9GZP0 370 aaPredicted RBP7.02□□□□□ -1.29
NR2E3-201ENST00000563709 RBM27Q9P2N5 1060 aaKnown RBP7.02□□□□□ -1.29
NR2E3-201ENST00000563709 ZBTB1Q9Y2K1 713 aa7.02□□□□□ -1.29
NR2E3-201ENST00000563709 RRP7AQ9Y3A4 280 aaKnown RBP7.02□□□□□ -1.29
NR2E3-201ENST00000563709 ZNF330Q9Y3S2 320 aaPredicted RBP7.02□□□□□ -1.29
NR2E3-201ENST00000563709 KDM3BQ7LBC6 1761 aa7.02□□□□□ -1.29
NR2E3-201ENST00000563709 ERBB4Q15303 1308 aa7.01□□□□□ -1.29
NR2E3-201ENST00000563709 C4AP0C0L4 1744 aa7.01□□□□□ -1.29
NR2E3-201ENST00000563709 NLGN1Q8N2Q7 840 aa7.01□□□□□ -1.29
NR2E3-201ENST00000563709 NGEFQ8N5V2 710 aa7.01□□□□□ -1.29
NR2E3-201ENST00000563709 THUMPD2Q9BTF0 503 aaKnown RBP7.01□□□□□ -1.29
NR2E3-201ENST00000563709 CHMP4AQ9BY43 222 aa7.01□□□□□ -1.29
NR2E3-201ENST00000563709 ZNF652Q9Y2D9 606 aa7.01□□□□□ -1.29
NR2E3-201ENST00000563709 PARP3Q9Y6F1 533 aa7.01□□□□□ -1.29
NR2E3-201ENST00000563709 VIRMAQ69YN4 1812 aaKnown RBP7.01□□□□□ -1.29
NR2E3-201ENST00000563709 C10orf71Q711Q0 1435 aa7.01□□□□□ -1.29
NR2E3-201ENST00000563709 CARMIL3Q8ND23 1372 aa7□□□□□ -1.29
NR2E3-201ENST00000563709 APAF1O14727 1248 aa7□□□□□ -1.29
NR2E3-201ENST00000563709 NPHP1O15259 732 aa7□□□□□ -1.29
NR2E3-201ENST00000563709 ACTN4O43707 911 aaKnown RBP7□□□□□ -1.29
NR2E3-201ENST00000563709 NR1I2O75469 434 aa7□□□□□ -1.29
NR2E3-201ENST00000563709 MMP10P09238 476 aa7□□□□□ -1.29
NR2E3-201ENST00000563709 HOXB7P09629 217 aa7□□□□□ -1.29
NR2E3-201ENST00000563709 CANXP27824 592 aaKnown RBP7□□□□□ -1.29
NR2E3-201ENST00000563709 IL6STP40189 918 aaPredicted RBP7□□□□□ -1.29
NR2E3-201ENST00000563709 GNAI1P63096 354 aa7□□□□□ -1.29
NR2E3-201ENST00000563709 KMT5BQ4FZB7 885 aa7□□□□□ -1.29
NR2E3-201ENST00000563709 XP32Q5T750 250 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms