RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 WEE1P30291 646 aa6.84□□□□□ -1.31
VPS35P1-201ENST00000563400 GTF2IP78347 998 aa6.84□□□□□ -1.31
VPS35P1-201ENST00000563400 NBPF20Q3BBV1 942 aa6.84□□□□□ -1.31
VPS35P1-201ENST00000563400 PLEKHG4Q58EX7 1191 aa6.84□□□□□ -1.31
VPS35P1-201ENST00000563400 ODR4Q5SWX8 454 aa6.84□□□□□ -1.31
VPS35P1-201ENST00000563400 RAVER1Q8IY67 606 aaKnown RBP6.84□□□□□ -1.31
VPS35P1-201ENST00000563400 GPATCH11Q8N954 259 aa6.84□□□□□ -1.31
VPS35P1-201ENST00000563400 CYLDQ9NQC7 956 aa6.84□□□□□ -1.31
VPS35P1-201ENST00000563400 PPP1R12AO14974 1030 aaPredicted RBP6.83□□□□□ -1.32
VPS35P1-201ENST00000563400 FSHRP23945 695 aa6.83□□□□□ -1.32
VPS35P1-201ENST00000563400 EVA1CP58658 441 aa6.83□□□□□ -1.32
VPS35P1-201ENST00000563400 DHX9Q08211 1270 aaKnown RBP6.83□□□□□ -1.32
VPS35P1-201ENST00000563400 SCARF1Q14162 830 aa6.83□□□□□ -1.32
VPS35P1-201ENST00000563400 ENOX2Q16206 610 aaKnown RBP6.83□□□□□ -1.32
VPS35P1-201ENST00000563400 MAP7D1Q3KQU3 841 aa6.83□□□□□ -1.32
VPS35P1-201ENST00000563400 MAP9Q49MG5 647 aa6.83□□□□□ -1.32
VPS35P1-201ENST00000563400 CKAP2LQ8IYA6 745 aa6.83□□□□□ -1.32
VPS35P1-201ENST00000563400 NEUROD4Q9HD90 331 aa6.83□□□□□ -1.32
VPS35P1-201ENST00000563400 THRAP3Q9Y2W1 955 aaKnown RBP6.83□□□□□ -1.32
VPS35P1-201ENST00000563400 PCDHB9Q9Y5E1 797 aa6.83□□□□□ -1.32
VPS35P1-201ENST00000563400 NUP160Q12769 1436 aa6.83□□□□□ -1.32
VPS35P1-201ENST00000563400 HMGB1P1B2RPK0 211 aaPredicted RBP6.82□□□□□ -1.32
VPS35P1-201ENST00000563400 GIGYF1O75420 1035 aaPredicted RBP6.82□□□□□ -1.32
VPS35P1-201ENST00000563400 UPP2O95045 317 aa6.82□□□□□ -1.32
VPS35P1-201ENST00000563400 GRM5P41594 1212 aa6.82□□□□□ -1.32
VPS35P1-201ENST00000563400 ADAMTS12P58397 1594 aa6.82□□□□□ -1.32
VPS35P1-201ENST00000563400 DZIP3Q86Y13 1208 aaKnown RBP6.82□□□□□ -1.32
VPS35P1-201ENST00000563400 ADAM32Q8TC27 787 aa6.82□□□□□ -1.32
VPS35P1-201ENST00000563400 SRPK1Q96SB4 655 aaKnown RBP6.82□□□□□ -1.32
VPS35P1-201ENST00000563400 PRXQ9BXM0 1461 aa6.82□□□□□ -1.32
VPS35P1-201ENST00000563400 GNL3LQ9NVN8 582 aaKnown RBP6.82□□□□□ -1.32
VPS35P1-201ENST00000563400 GMPR2Q9P2T1 348 aaKnown RBP6.82□□□□□ -1.32
VPS35P1-201ENST00000563400 DACH1Q9UI36 760 aa6.82□□□□□ -1.32
VPS35P1-201ENST00000563400 TNFRSF10BO14763 440 aa6.81□□□□□ -1.32
VPS35P1-201ENST00000563400 PTCD1O75127 700 aaKnown RBP6.81□□□□□ -1.32
VPS35P1-201ENST00000563400 WDHD1O75717 1129 aaPredicted RBP6.81□□□□□ -1.32
VPS35P1-201ENST00000563400 ZIC2O95409 532 aaPredicted RBP6.81□□□□□ -1.32
VPS35P1-201ENST00000563400 ITGAEP38570 1179 aa6.81□□□□□ -1.32
VPS35P1-201ENST00000563400 CYB5RLQ6IPT4 315 aa6.81□□□□□ -1.32
VPS35P1-201ENST00000563400 CLEC4GQ6UXB4 293 aa6.81□□□□□ -1.32
VPS35P1-201ENST00000563400 CCDC116Q8IYX3 515 aa6.81□□□□□ -1.32
VPS35P1-201ENST00000563400 TSR2Q969E8 191 aaKnown RBP6.81□□□□□ -1.32
VPS35P1-201ENST00000563400 PGPEP1Q9NXJ5 209 aa6.81□□□□□ -1.32
VPS35P1-201ENST00000563400 RBM19Q9Y4C8 960 aaKnown RBP6.81□□□□□ -1.32
VPS35P1-201ENST00000563400 RPS6KL1Q9Y6S9 549 aa6.81□□□□□ -1.32
VPS35P1-201ENST00000563400 TNIKQ9UKE5 1360 aa6.81□□□□□ -1.32
VPS35P1-201ENST00000563400 FZD6O60353 706 aa6.81□□□□□ -1.32
VPS35P1-201ENST00000563400 TIMP2P16035 220 aa6.81□□□□□ -1.32
VPS35P1-201ENST00000563400 MZF1P28698 734 aaPredicted RBP6.81□□□□□ -1.32
VPS35P1-201ENST00000563400 GJA8P48165 433 aa6.81□□□□□ -1.32
VPS35P1-201ENST00000563400 ATP2B2Q01814 1243 aa6.81□□□□□ -1.32
VPS35P1-201ENST00000563400 PAK2Q13177 524 aa6.81□□□□□ -1.32
VPS35P1-201ENST00000563400 OXLD1Q5BKU9 147 aa6.81□□□□□ -1.32
VPS35P1-201ENST00000563400 TSEN2Q8NCE0 465 aaKnown RBP6.81□□□□□ -1.32
VPS35P1-201ENST00000563400 CCDC85AQ96PX6 553 aaPredicted RBP6.81□□□□□ -1.32
VPS35P1-201ENST00000563400 KCTD15Q96SI1 283 aaPredicted RBP6.81□□□□□ -1.32
VPS35P1-201ENST00000563400 OCSTAMPQ9BR26 566 aa6.81□□□□□ -1.32
VPS35P1-201ENST00000563400 C12orf49Q9H741 205 aa6.81□□□□□ -1.32
VPS35P1-201ENST00000563400 FANCLQ9NW38 375 aa6.81□□□□□ -1.32
VPS35P1-201ENST00000563400 PRKAB1Q9Y478 270 aa6.81□□□□□ -1.32
VPS35P1-201ENST00000563400 PTPRGP23470 1445 aa6.8□□□□□ -1.32
VPS35P1-201ENST00000563400 PNMA6FA0A0J9YX94 578 aa6.8□□□□□ -1.32
VPS35P1-201ENST00000563400 CCDC189A1A4V9 331 aa6.8□□□□□ -1.32
VPS35P1-201ENST00000563400 PDE6BP35913 854 aa6.8□□□□□ -1.32
VPS35P1-201ENST00000563400 FERMT3Q86UX7 667 aa6.8□□□□□ -1.32
VPS35P1-201ENST00000563400 MKL1Q969V6 931 aa6.8□□□□□ -1.32
VPS35P1-201ENST00000563400 TRIM47Q96LD4 638 aa6.8□□□□□ -1.32
VPS35P1-201ENST00000563400 DMRTB1Q96MA1 342 aa6.8□□□□□ -1.32
VPS35P1-201ENST00000563400 NIF3L1Q9GZT8 377 aa6.8□□□□□ -1.32
VPS35P1-201ENST00000563400 TCEAL9Q9UHQ7 104 aa6.8□□□□□ -1.32
VPS35P1-201ENST00000563400 EID1Q9Y6B2 187 aa6.8□□□□□ -1.32
VPS35P1-201ENST00000563400 PRG4Q92954 1404 aaPredicted RBP6.79□□□□□ -1.32
VPS35P1-201ENST00000563400 FAM221BA6H8Z2 402 aa6.79□□□□□ -1.32
VPS35P1-201ENST00000563400 POTECB2RU33 542 aa6.79□□□□□ -1.32
VPS35P1-201ENST00000563400 GYS2P54840 703 aa6.79□□□□□ -1.32
VPS35P1-201ENST00000563400 CHMP4BP1P59074 171 aa6.79□□□□□ -1.32
VPS35P1-201ENST00000563400 UBE4AQ14139 1066 aa6.79□□□□□ -1.32
VPS35P1-201ENST00000563400 PRPF38AQ8NAV1 312 aaKnown RBP6.79□□□□□ -1.32
VPS35P1-201ENST00000563400 CRELD1Q96HD1 420 aa6.79□□□□□ -1.32
VPS35P1-201ENST00000563400 C8orf48Q96LL4 319 aa6.79□□□□□ -1.32
VPS35P1-201ENST00000563400 CITED4Q96RK1 184 aa6.79□□□□□ -1.32
VPS35P1-201ENST00000563400 ZNF408Q9H9D4 720 aa6.79□□□□□ -1.32
VPS35P1-201ENST00000563400 CDC45O75419 566 aa6.78□□□□□ -1.32
VPS35P1-201ENST00000563400 NR3C2P08235 984 aa6.78□□□□□ -1.32
VPS35P1-201ENST00000563400 PTMSP20962 102 aa6.78□□□□□ -1.32
VPS35P1-201ENST00000563400 GNA15P30679 374 aa6.78□□□□□ -1.32
VPS35P1-201ENST00000563400 AAMPQ13685 434 aa6.78□□□□□ -1.32
VPS35P1-201ENST00000563400 MRPL14Q6P1L8 145 aaKnown RBP6.78□□□□□ -1.32
VPS35P1-201ENST00000563400 PGBD3Q8N328 593 aa6.78□□□□□ -1.32
VPS35P1-201ENST00000563400 ITPKCQ96DU7 683 aa6.78□□□□□ -1.32
VPS35P1-201ENST00000563400 FRMD6Q96NE9 622 aa6.78□□□□□ -1.32
VPS35P1-201ENST00000563400 FAM129BQ96TA1 746 aa6.78□□□□□ -1.32
VPS35P1-201ENST00000563400 CFHR5Q9BXR6 569 aa6.78□□□□□ -1.32
VPS35P1-201ENST00000563400 SAP130Q9H0E3 1048 aa6.78□□□□□ -1.32
VPS35P1-201ENST00000563400 SNTG2Q9NY99 539 aa6.78□□□□□ -1.32
VPS35P1-201ENST00000563400 GGT7Q9UJ14 662 aa6.78□□□□□ -1.32
VPS35P1-201ENST00000563400 DOLKQ9UPQ8 538 aa6.78□□□□□ -1.32
VPS35P1-201ENST00000563400 PCDHGA11Q9Y5H2 935 aa6.78□□□□□ -1.32
VPS35P1-201ENST00000563400 FMN1Q68DA7 1419 aa6.78□□□□□ -1.32
VPS35P1-201ENST00000563400 KIF21BO75037 1637 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms