RNA–Protein interactions for RNA: ENST00000562772.1

AP003071.2-201, humanhuman

TSL 1 (best) BASIC

Gene AP003071.2, Length 990 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003071.2-201ENST00000562772 PHACTR3Q96KR7 559 aa10.12□□□□□ -0.79
AP003071.2-201ENST00000562772 TRAIPQ9BWF2 469 aa10.12□□□□□ -0.79
AP003071.2-201ENST00000562772 C4AP0C0L4 1744 aa10.12□□□□□ -0.79
AP003071.2-201ENST00000562772 KCPQ6ZWJ8 1503 aa10.12□□□□□ -0.79
AP003071.2-201ENST00000562772 U2AF1L5P0DN76 240 aaPredicted RBP10.11□□□□□ -0.79
AP003071.2-201ENST00000562772 YY1P25490 414 aa10.11□□□□□ -0.79
AP003071.2-201ENST00000562772 U2AF1Q01081 240 aaKnown RBP eCLIP10.11□□□□□ -0.79
AP003071.2-201ENST00000562772 RALBP1Q15311 655 aa10.11□□□□□ -0.79
AP003071.2-201ENST00000562772 INTS5Q6P9B9 1019 aaKnown RBP10.11□□□□□ -0.79
AP003071.2-201ENST00000562772 RGS22Q8NE09 1264 aa10.11□□□□□ -0.79
AP003071.2-201ENST00000562772 WBP1LQ9NX94 342 aa10.11□□□□□ -0.79
AP003071.2-201ENST00000562772 HPS5Q9UPZ3 1129 aa10.11□□□□□ -0.79
AP003071.2-201ENST00000562772 GRIN3BO60391 1043 aa10.1□□□□□ -0.79
AP003071.2-201ENST00000562772 RNF40O75150 1001 aa10.1□□□□□ -0.79
AP003071.2-201ENST00000562772 CYP19A1P11511 503 aaPredicted RBP10.1□□□□□ -0.79
AP003071.2-201ENST00000562772 GYS1P13807 737 aa10.1□□□□□ -0.79
AP003071.2-201ENST00000562772 RFC4P35249 363 aa10.1□□□□□ -0.79
AP003071.2-201ENST00000562772 TEFQ10587 303 aa10.1□□□□□ -0.79
AP003071.2-201ENST00000562772 AMHR2Q16671 573 aa10.1□□□□□ -0.79
AP003071.2-201ENST00000562772 SMIM5Q71RC9 77 aa10.1□□□□□ -0.79
AP003071.2-201ENST00000562772 NLGN2Q8NFZ4 835 aa10.1□□□□□ -0.79
AP003071.2-201ENST00000562772 TMUB1Q9BVT8 246 aa10.1□□□□□ -0.79
AP003071.2-201ENST00000562772 TEX13AQ9BXU3 409 aaPredicted RBP10.1□□□□□ -0.79
AP003071.2-201ENST00000562772 DLG5Q8TDM6 1919 aa10.09□□□□□ -0.79
AP003071.2-201ENST00000562772 SLC10A3P09131 477 aa10.09□□□□□ -0.79
AP003071.2-201ENST00000562772 SLC39A6Q13433 755 aa10.09□□□□□ -0.79
AP003071.2-201ENST00000562772 GPR162Q16538 588 aa10.09□□□□□ -0.79
AP003071.2-201ENST00000562772 ZNF790Q6PG37 636 aa10.09□□□□□ -0.79
AP003071.2-201ENST00000562772 DNAJC10Q8IXB1 793 aa10.09□□□□□ -0.79
AP003071.2-201ENST00000562772 TTC5Q8N0Z6 440 aa10.09□□□□□ -0.79
AP003071.2-201ENST00000562772 CCDC87Q9NVE4 849 aa10.09□□□□□ -0.79
AP003071.2-201ENST00000562772 USP42Q9H9J4 1324 aaKnown RBP10.08□□□□□ -0.8
AP003071.2-201ENST00000562772 MMP10P09238 476 aa10.08□□□□□ -0.8
AP003071.2-201ENST00000562772 PNNQ9H307 717 aaKnown RBP10.08□□□□□ -0.8
AP003071.2-201ENST00000562772 TSR3Q9UJK0 312 aaKnown RBP10.08□□□□□ -0.8
AP003071.2-201ENST00000562772 SOS1Q07889 1333 aaPredicted RBP10.07□□□□□ -0.8
AP003071.2-201ENST00000562772 HEG1Q9ULI3 1381 aa10.07□□□□□ -0.8
AP003071.2-201ENST00000562772 STARD3NLO95772 234 aa10.07□□□□□ -0.8
AP003071.2-201ENST00000562772 NEFMP07197 916 aa10.07□□□□□ -0.8
AP003071.2-201ENST00000562772 TGFB2P61812 414 aa10.07□□□□□ -0.8
AP003071.2-201ENST00000562772 PDE4DQ08499 809 aa10.07□□□□□ -0.8
AP003071.2-201ENST00000562772 SLF2Q8IX21 1173 aa10.07□□□□□ -0.8
AP003071.2-201ENST00000562772 RTF1Q92541 710 aaKnown RBP10.07□□□□□ -0.8
AP003071.2-201ENST00000562772 ZNF496Q96IT1 587 aaPredicted RBP10.07□□□□□ -0.8
AP003071.2-201ENST00000562772 DDX11L8A8MPP1 907 aa10.06□□□□□ -0.8
AP003071.2-201ENST00000562772 PPP4CP60510 307 aa10.06□□□□□ -0.8
AP003071.2-201ENST00000562772 PARP9Q8IXQ6 854 aa10.06□□□□□ -0.8
AP003071.2-201ENST00000562772 IL27Q8NEV9 243 aa10.06□□□□□ -0.8
AP003071.2-201ENST00000562772 FMNL2Q96PY5 1086 aa10.06□□□□□ -0.8
AP003071.2-201ENST00000562772 PLEKHF1Q96S99 279 aa10.06□□□□□ -0.8
AP003071.2-201ENST00000562772 GPCPD1Q9NPB8 672 aa10.06□□□□□ -0.8
AP003071.2-201ENST00000562772 HCSTQ9UBK5 93 aa10.06□□□□□ -0.8
AP003071.2-201ENST00000562772 NARFQ9UHQ1 456 aa10.06□□□□□ -0.8
AP003071.2-201ENST00000562772 KIAA1551Q9HCM1 1747 aa10.06□□□□□ -0.8
AP003071.2-201ENST00000562772 BRCA1P38398 1863 aaKnown RBP10.06□□□□□ -0.8
AP003071.2-201ENST00000562772 C10orf71Q711Q0 1435 aa10.06□□□□□ -0.8
AP003071.2-201ENST00000562772 A0A087WZG4 1122 aa10.05□□□□□ -0.8
AP003071.2-201ENST00000562772 BTBD11A6QL63 1104 aa10.05□□□□□ -0.8
AP003071.2-201ENST00000562772 ZPR1O75312 459 aa10.05□□□□□ -0.8
AP003071.2-201ENST00000562772 YBX3P16989 372 aaKnown RBP eCLIP10.05□□□□□ -0.8
AP003071.2-201ENST00000562772 TM4SF1P30408 202 aa10.05□□□□□ -0.8
AP003071.2-201ENST00000562772 CLCN1P35523 988 aa10.05□□□□□ -0.8
AP003071.2-201ENST00000562772 ZEB1P37275 1124 aaPredicted RBP10.05□□□□□ -0.8
AP003071.2-201ENST00000562772 EIF5P55010 431 aaKnown RBP10.05□□□□□ -0.8
AP003071.2-201ENST00000562772 FLIIQ13045 1269 aa10.05□□□□□ -0.8
AP003071.2-201ENST00000562772 DDX10Q13206 875 aaKnown RBP10.05□□□□□ -0.8
AP003071.2-201ENST00000562772 TTLL12Q14166 644 aaPredicted RBP10.05□□□□□ -0.8
AP003071.2-201ENST00000562772 PARP3Q9Y6F1 533 aa10.05□□□□□ -0.8
AP003071.2-201ENST00000562772 COL15A1P39059 1388 aa10.04□□□□□ -0.8
AP003071.2-201ENST00000562772 IL6STP40189 918 aaPredicted RBP10.04□□□□□ -0.8
AP003071.2-201ENST00000562772 TAF7Q15545 349 aaPredicted RBP10.04□□□□□ -0.8
AP003071.2-201ENST00000562772 FAM217BQ9NTX9 383 aaPredicted RBP10.04□□□□□ -0.8
AP003071.2-201ENST00000562772 SRP68Q9UHB9 627 aaKnown RBP10.04□□□□□ -0.8
AP003071.2-201ENST00000562772 ZBTB1Q9Y2K1 713 aa10.04□□□□□ -0.8
AP003071.2-201ENST00000562772 AFDNP55196 1824 aaKnown RBP10.04□□□□□ -0.8
AP003071.2-201ENST00000562772 NRXN2Q9P2S2 1712 aa10.04□□□□□ -0.8
AP003071.2-201ENST00000562772 MYBBP1AQ9BQG0 1328 aaKnown RBP10.04□□□□□ -0.8
AP003071.2-201ENST00000562772 PXDNLA1KZ92 1463 aa10.04□□□□□ -0.8
AP003071.2-201ENST00000562772 N4BP2Q86UW6 1770 aaPredicted RBP10.03□□□□□ -0.8
AP003071.2-201ENST00000562772 ARFGEF1Q9Y6D6 1849 aa10.03□□□□□ -0.8
AP003071.2-201ENST00000562772 APLP1P51693 650 aa10.03□□□□□ -0.8
AP003071.2-201ENST00000562772 NFE2L2Q16236 605 aa10.03□□□□□ -0.8
AP003071.2-201ENST00000562772 USPL1Q5W0Q7 1092 aa10.03□□□□□ -0.8
AP003071.2-201ENST00000562772 GIGYF2Q6Y7W6 1299 aaKnown RBP10.03□□□□□ -0.8
AP003071.2-201ENST00000562772 MCM10Q7L590 875 aa10.03□□□□□ -0.8
AP003071.2-201ENST00000562772 PNISRQ8TF01 805 aaKnown RBP10.03□□□□□ -0.8
AP003071.2-201ENST00000562772 UTRNP46939 3433 aa10.03□□□□□ -0.8
AP003071.2-201ENST00000562772 KDM3BQ7LBC6 1761 aa10.03□□□□□ -0.8
AP003071.2-201ENST00000562772 POLRMTO00411 1230 aaKnown RBP10.02□□□□□ -0.81
AP003071.2-201ENST00000562772 SNRPA1P09661 255 aaKnown RBP10.02□□□□□ -0.81
AP003071.2-201ENST00000562772 DDR1Q08345 913 aa10.02□□□□□ -0.81
AP003071.2-201ENST00000562772 ZNF784Q8NCA9 323 aaPredicted RBP10.02□□□□□ -0.81
AP003071.2-201ENST00000562772 KCNQ3O43525 872 aa10.01□□□□□ -0.81
AP003071.2-201ENST00000562772 CANXP27824 592 aaKnown RBP10.01□□□□□ -0.81
AP003071.2-201ENST00000562772 SLC4A3P48751 1232 aa10.01□□□□□ -0.81
AP003071.2-201ENST00000562772 TMCO4Q5TGY1 634 aa10.01□□□□□ -0.81
AP003071.2-201ENST00000562772 CCDC82Q8N4S0 544 aa10.01□□□□□ -0.81
AP003071.2-201ENST00000562772 RDH13Q8NBN7 331 aa10.01□□□□□ -0.81
AP003071.2-201ENST00000562772 MAPK8IP3Q9UPT6 1336 aa10.01□□□□□ -0.81
AP003071.2-201ENST00000562772 SCN7AQ01118 1682 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms