RNA–Protein interactions for RNA: ENST00000562543.5

TCF4-213, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-213ENST00000562543 NDUFV2P19404 249 aa9.13□□□□□ -0.95
TCF4-213ENST00000562543 TMEM132EQ6IEE7 984 aa9.13□□□□□ -0.95
TCF4-213ENST00000562543 NBPF15Q8N660 670 aa9.13□□□□□ -0.95
TCF4-213ENST00000562543 KRI1Q8N9T8 703 aaKnown RBP9.13□□□□□ -0.95
TCF4-213ENST00000562543 EIF3AQ14152 1382 aaKnown RBP9.12□□□□□ -0.95
TCF4-213ENST00000562543 RGPD5Q99666 1765 aa9.12□□□□□ -0.95
TCF4-213ENST00000562543 WDR33Q9C0J8 1336 aaKnown RBP9.12□□□□□ -0.95
TCF4-213ENST00000562543 MKI67P46013 3256 aaKnown RBP9.12□□□□□ -0.95
TCF4-213ENST00000562543 SLIT3O75094 1523 aa9.12□□□□□ -0.95
TCF4-213ENST00000562543 TMEM88BA6NKF7 163 aa9.12□□□□□ -0.95
TCF4-213ENST00000562543 SIAH2O43255 324 aa9.12□□□□□ -0.95
TCF4-213ENST00000562543 FDX1P10109 184 aa9.12□□□□□ -0.95
TCF4-213ENST00000562543 TGFB2P61812 414 aa9.12□□□□□ -0.95
TCF4-213ENST00000562543 RETREG3Q86VR2 466 aa9.12□□□□□ -0.95
TCF4-213ENST00000562543 FLAD1Q8NFF5 587 aa9.12□□□□□ -0.95
TCF4-213ENST00000562543 CARD10Q9BWT7 1032 aa9.12□□□□□ -0.95
TCF4-213ENST00000562543 SENP2Q9HC62 589 aa9.12□□□□□ -0.95
TCF4-213ENST00000562543 UBR3Q6ZT12 1888 aa9.12□□□□□ -0.95
TCF4-213ENST00000562543 GCP02774 474 aa9.11□□□□□ -0.95
TCF4-213ENST00000562543 EHBP1Q8NDI1 1231 aa9.11□□□□□ -0.95
TCF4-213ENST00000562543 DOT1LQ8TEK3 1739 aa9.11□□□□□ -0.95
TCF4-213ENST00000562543 ADGRF5Q8IZF2 1346 aa9.1□□□□□ -0.95
TCF4-213ENST00000562543 A0A0G2JLW4 131 aa9.1□□□□□ -0.95
TCF4-213ENST00000562543 SSTR3P32745 418 aaPredicted RBP9.1□□□□□ -0.95
TCF4-213ENST00000562543 SH3BP2P78314 561 aa9.1□□□□□ -0.95
TCF4-213ENST00000562543 SPIRE2Q8WWL2 714 aa9.1□□□□□ -0.95
TCF4-213ENST00000562543 DCAF5Q96JK2 942 aa9.1□□□□□ -0.95
TCF4-213ENST00000562543 CCNL1Q9UK58 526 aaPredicted RBP9.1□□□□□ -0.95
TCF4-213ENST00000562543 NSD2O96028 1365 aa9.1□□□□□ -0.95
TCF4-213ENST00000562543 CCDC7Q96M83 1385 aa9.1□□□□□ -0.95
TCF4-213ENST00000562543 PIK3C2GO75747 1445 aa9.09□□□□□ -0.95
TCF4-213ENST00000562543 WIPF1O43516 503 aa9.09□□□□□ -0.95
TCF4-213ENST00000562543 DEFB115Q30KQ5 88 aa9.09□□□□□ -0.95
TCF4-213ENST00000562543 LINC01559Q495D7 138 aa9.09□□□□□ -0.95
TCF4-213ENST00000562543 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.09□□□□□ -0.95
TCF4-213ENST00000562543 TRIM46Q7Z4K8 759 aa9.09□□□□□ -0.95
TCF4-213ENST00000562543 BEGAINQ9BUH8 593 aa9.09□□□□□ -0.95
TCF4-213ENST00000562543 UNC80Q8N2C7 3258 aa9.08□□□□□ -0.96
TCF4-213ENST00000562543 MOXD2PA6NHM9 499 aa9.08□□□□□ -0.96
TCF4-213ENST00000562543 MS4A1P11836 297 aa9.08□□□□□ -0.96
TCF4-213ENST00000562543 SAFB2Q14151 953 aaKnown RBP eCLIP9.08□□□□□ -0.96
TCF4-213ENST00000562543 KANK4Q5T7N3 995 aaPredicted RBP9.08□□□□□ -0.96
TCF4-213ENST00000562543 C4BP0C0L5 1744 aa9.08□□□□□ -0.96
TCF4-213ENST00000562543 CCNYL3P0C7X3 344 aa9.07□□□□□ -0.96
TCF4-213ENST00000562543 DPEP1P16444 411 aa9.07□□□□□ -0.96
TCF4-213ENST00000562543 SMIM5Q71RC9 77 aa9.07□□□□□ -0.96
TCF4-213ENST00000562543 VSIG10Q8N0Z9 540 aa9.07□□□□□ -0.96
TCF4-213ENST00000562543 BAP1Q92560 729 aa9.07□□□□□ -0.96
TCF4-213ENST00000562543 PRAM1Q96QH2 718 aa9.07□□□□□ -0.96
TCF4-213ENST00000562543 WASF2Q9Y6W5 498 aa9.07□□□□□ -0.96
TCF4-213ENST00000562543 POLR3AO14802 1390 aaPredicted RBP9.07□□□□□ -0.96
TCF4-213ENST00000562543 CCDC88AQ3V6T2 1871 aa9.06□□□□□ -0.96
TCF4-213ENST00000562543 CAPN5O15484 640 aaPredicted RBP9.06□□□□□ -0.96
TCF4-213ENST00000562543 KCNA3P22001 575 aa9.06□□□□□ -0.96
TCF4-213ENST00000562543 AMIGO3Q86WK7 504 aa9.06□□□□□ -0.96
TCF4-213ENST00000562543 KIFC2Q96AC6 838 aa9.06□□□□□ -0.96
TCF4-213ENST00000562543 SPTBN5Q9NRC6 3674 aaKnown RBP9.05□□□□□ -0.96
TCF4-213ENST00000562543 TRIOBPQ9H2D6 2365 aa9.05□□□□□ -0.96
TCF4-213ENST00000562543 ABTB2Q8N961 1025 aa9.05□□□□□ -0.96
TCF4-213ENST00000562543 PRR7Q8TB68 274 aa9.05□□□□□ -0.96
TCF4-213ENST00000562543 UNC93B1Q9H1C4 597 aa9.05□□□□□ -0.96
TCF4-213ENST00000562543 TLL2Q9Y6L7 1015 aa9.05□□□□□ -0.96
TCF4-213ENST00000562543 CPSF1Q10570 1443 aaKnown RBP9.05□□□□□ -0.96
TCF4-213ENST00000562543 ANKRD36BQ8N2N9 1353 aa9.04□□□□□ -0.96
TCF4-213ENST00000562543 VCANP13611 3396 aa9.04□□□□□ -0.96
TCF4-213ENST00000562543 ZBTB7CA1YPR0 619 aa9.04□□□□□ -0.96
TCF4-213ENST00000562543 INSM1Q01101 510 aaPredicted RBP9.04□□□□□ -0.96
TCF4-213ENST00000562543 TTLL12Q14166 644 aaPredicted RBP9.04□□□□□ -0.96
TCF4-213ENST00000562543 EVA1BQ9NVM1 165 aa9.04□□□□□ -0.96
TCF4-213ENST00000562543 STK17AQ9UEE5 414 aa9.04□□□□□ -0.96
TCF4-213ENST00000562543 ADAMTSL1Q8N6G6 1762 aa9.04□□□□□ -0.96
TCF4-213ENST00000562543 C4AP0C0L4 1744 aa9.03□□□□□ -0.96
TCF4-213ENST00000562543 CA12O43570 354 aa9.03□□□□□ -0.96
TCF4-213ENST00000562543 RASSF7Q02833 373 aa9.03□□□□□ -0.96
TCF4-213ENST00000562543 NLRP13Q86W25 1043 aa9.03□□□□□ -0.96
TCF4-213ENST00000562543 NSD3Q9BZ95 1437 aa9.03□□□□□ -0.96
TCF4-213ENST00000562543 MMP10P09238 476 aa9.02□□□□□ -0.97
TCF4-213ENST00000562543 LMNB1P20700 586 aa9.02□□□□□ -0.97
TCF4-213ENST00000562543 PTPRNQ16849 979 aa9.02□□□□□ -0.97
TCF4-213ENST00000562543 DICER1Q9UPY3 1922 aaKnown RBP9.01□□□□□ -0.97
TCF4-213ENST00000562543 CACNA1AO00555 2505 aa9.01□□□□□ -0.97
TCF4-213ENST00000562543 WASLO00401 505 aaPredicted RBP9.01□□□□□ -0.97
TCF4-213ENST00000562543 CSB-PGBD3P0DP91 1061 aa9.01□□□□□ -0.97
TCF4-213ENST00000562543 KCNH2Q12809 1159 aa9.01□□□□□ -0.97
TCF4-213ENST00000562543 DALRD3Q5D0E6 543 aaKnown RBP9.01□□□□□ -0.97
TCF4-213ENST00000562543 LDHDQ86WU2 507 aa9.01□□□□□ -0.97
TCF4-213ENST00000562543 CAPNS2Q96L46 248 aa9.01□□□□□ -0.97
TCF4-213ENST00000562543 PIM2Q9P1W9 311 aa9.01□□□□□ -0.97
TCF4-213ENST00000562543 NXF1Q9UBU9 619 aaKnown RBP9.01□□□□□ -0.97
TCF4-213ENST00000562543 GMPRP36959 345 aa9□□□□□ -0.97
TCF4-213ENST00000562543 GIGYF2Q6Y7W6 1299 aaKnown RBP9□□□□□ -0.97
TCF4-213ENST00000562543 ZNF511Q8NB15 262 aa9□□□□□ -0.97
TCF4-213ENST00000562543 ZFP42Q96MM3 310 aa9□□□□□ -0.97
TCF4-213ENST00000562543 GPR101Q96P66 508 aaPredicted RBP9□□□□□ -0.97
TCF4-213ENST00000562543 SCN4AP35499 1836 aa9□□□□□ -0.97
TCF4-213ENST00000562543 RANBP2P49792 3224 aaKnown RBP8.99□□□□□ -0.97
TCF4-213ENST00000562543 BRCA2P51587 3418 aa8.99□□□□□ -0.97
TCF4-213ENST00000562543 ECE1P42892 770 aa8.99□□□□□ -0.97
TCF4-213ENST00000562543 MTMR2Q13614 643 aa8.99□□□□□ -0.97
TCF4-213ENST00000562543 SYTL4Q96C24 671 aaPredicted RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms