RNA–Protein interactions for RNA: ENST00000561091.1

SHF-209, Transcript of Src homology 2 domain containing F, humanhuman

TSL 5

Gene SHF, Length 577 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-209ENST00000561091 NEFLP07196 543 aa19.99■□□□□ 0.79
SHF-209ENST00000561091 CHRNA5P30532 468 aa19.99■□□□□ 0.79
SHF-209ENST00000561091 PDE6BP35913 854 aa19.99■□□□□ 0.79
SHF-209ENST00000561091 TTLL11Q8NHH1 800 aa19.99■□□□□ 0.79
SHF-209ENST00000561091 HDAC5Q9UQL6 1122 aa19.99■□□□□ 0.79
SHF-209ENST00000561091 SF3B3Q15393 1217 aaKnown RBP19.98■□□□□ 0.79
SHF-209ENST00000561091 C2CD5Q86YS7 1000 aa19.98■□□□□ 0.79
SHF-209ENST00000561091 CHMP3Q9Y3E7 222 aa19.98■□□□□ 0.79
SHF-209ENST00000561091 KLRG2A4D1S0 409 aaPredicted RBP19.97■□□□□ 0.79
SHF-209ENST00000561091 CSF1RP07333 972 aa19.97■□□□□ 0.79
SHF-209ENST00000561091 FAM161AQ3B820 660 aa19.97■□□□□ 0.79
SHF-209ENST00000561091 RABL6Q3YEC7 729 aaPredicted RBP19.97■□□□□ 0.79
SHF-209ENST00000561091 CRY2Q49AN0 593 aa19.97■□□□□ 0.79
SHF-209ENST00000561091 GREM2Q9H772 168 aa19.97■□□□□ 0.79
SHF-209ENST00000561091 BRCA1P38398 1863 aaKnown RBP19.96■□□□□ 0.79
SHF-209ENST00000561091 CCDC152Q4G0S7 254 aa19.96■□□□□ 0.79
SHF-209ENST00000561091 RPGRQ92834 1020 aaKnown RBP19.96■□□□□ 0.79
SHF-209ENST00000561091 FHDC1Q9C0D6 1143 aaPredicted RBP19.96■□□□□ 0.79
SHF-209ENST00000561091 CD2APQ9Y5K6 639 aa19.96■□□□□ 0.79
SHF-209ENST00000561091 A0A0G2JLW4 131 aa19.95■□□□□ 0.78
SHF-209ENST00000561091 H0YIN7 160 aa19.95■□□□□ 0.78
SHF-209ENST00000561091 SRGNP10124 158 aa19.95■□□□□ 0.78
SHF-209ENST00000561091 DPEP1P16444 411 aa19.95■□□□□ 0.78
SHF-209ENST00000561091 CEP85Q6P2H3 762 aa19.95■□□□□ 0.78
SHF-209ENST00000561091 SEC31BQ9NQW1 1179 aa19.95■□□□□ 0.78
SHF-209ENST00000561091 PNMA6EA0A0J9YXQ4 647 aa19.94■□□□□ 0.78
SHF-209ENST00000561091 NLGN2Q8NFZ4 835 aa19.94■□□□□ 0.78
SHF-209ENST00000561091 PCDHB15Q9Y5E8 787 aa19.94■□□□□ 0.78
SHF-209ENST00000561091 RTL9Q8NET4 1388 aa19.94■□□□□ 0.78
SHF-209ENST00000561091 NPR1P16066 1061 aa19.93■□□□□ 0.78
SHF-209ENST00000561091 ITGA6P23229 1130 aa19.93■□□□□ 0.78
SHF-209ENST00000561091 TGFB2P61812 414 aa19.93■□□□□ 0.78
SHF-209ENST00000561091 ZNF622Q969S3 477 aaKnown RBP eCLIP19.93■□□□□ 0.78
SHF-209ENST00000561091 SLX4Q8IY92 1834 aa19.92■□□□□ 0.78
SHF-209ENST00000561091 SRGAP3O43295 1099 aa19.92■□□□□ 0.78
SHF-209ENST00000561091 KCNA3P22001 575 aa19.92■□□□□ 0.78
SHF-209ENST00000561091 HOXA10P31260 410 aaPredicted RBP19.92■□□□□ 0.78
SHF-209ENST00000561091 ATP8B2P98198 1209 aa19.92■□□□□ 0.78
SHF-209ENST00000561091 MTX1Q13505 466 aa19.92■□□□□ 0.78
SHF-209ENST00000561091 DDX46Q7L014 1031 aaKnown RBP19.92■□□□□ 0.78
SHF-209ENST00000561091 MASTLQ96GX5 879 aa19.92■□□□□ 0.78
SHF-209ENST00000561091 RBM17Q96I25 401 aaKnown RBP19.92■□□□□ 0.78
SHF-209ENST00000561091 ZNF594Q96JF6 807 aaPredicted RBP19.92■□□□□ 0.78
SHF-209ENST00000561091 ANKRD18BA2A2Z9 1011 aa19.91■□□□□ 0.78
SHF-209ENST00000561091 IFIT5Q13325 482 aaKnown RBP19.91■□□□□ 0.78
SHF-209ENST00000561091 CCDC57Q2TAC2 916 aa19.91■□□□□ 0.78
SHF-209ENST00000561091 STYK1Q6J9G0 422 aa19.91■□□□□ 0.78
SHF-209ENST00000561091 SIRT2Q8IXJ6 389 aa19.91■□□□□ 0.78
SHF-209ENST00000561091 KLHDC4Q8TBB5 520 aa19.91■□□□□ 0.78
SHF-209ENST00000561091 CELF1Q92879 486 aaKnown RBP19.91■□□□□ 0.78
SHF-209ENST00000561091 WWC3Q9ULE0 1092 aa19.91■□□□□ 0.78
SHF-209ENST00000561091 PDZRN3Q9UPQ7 1066 aa19.91■□□□□ 0.78
SHF-209ENST00000561091 RFX5P48382 616 aaPredicted RBP19.9■□□□□ 0.78
SHF-209ENST00000561091 AAMPQ13685 434 aa19.9■□□□□ 0.78
SHF-209ENST00000561091 CRAMP1Q96RY5 1269 aa19.9■□□□□ 0.78
SHF-209ENST00000561091 A0A1B0GUL6 1792 aa19.89■□□□□ 0.77
SHF-209ENST00000561091 GRAPQ13588 217 aa19.89■□□□□ 0.77
SHF-209ENST00000561091 POLA2Q14181 598 aa19.89■□□□□ 0.77
SHF-209ENST00000561091 SLC51AQ86UW1 340 aa19.89■□□□□ 0.77
SHF-209ENST00000561091 RPAP2Q8IXW5 612 aaPredicted RBP19.89■□□□□ 0.77
SHF-209ENST00000561091 GRAPLQ8TC17 118 aaPredicted RBP19.89■□□□□ 0.77
SHF-209ENST00000561091 SYT17Q9BSW7 474 aa19.89■□□□□ 0.77
SHF-209ENST00000561091 PA2G4Q9UQ80 394 aaKnown RBP19.89■□□□□ 0.77
SHF-209ENST00000561091 TAF7LQ5H9L4 462 aa19.88■□□□□ 0.77
SHF-209ENST00000561091 SSH3Q8TE77 659 aa19.88■□□□□ 0.77
SHF-209ENST00000561091 CDC5LQ99459 802 aaKnown RBP19.88■□□□□ 0.77
SHF-209ENST00000561091 LRRC37AA6NMS7 1700 aa19.88■□□□□ 0.77
SHF-209ENST00000561091 RPS8P62241 208 aaKnown RBP19.87■□□□□ 0.77
SHF-209ENST00000561091 PTPN12Q05209 780 aaKnown RBP19.87■□□□□ 0.77
SHF-209ENST00000561091 ANKRD18AQ8IVF6 992 aa19.87■□□□□ 0.77
SHF-209ENST00000561091 ALDH1B1P30837 517 aa19.86■□□□□ 0.77
SHF-209ENST00000561091 PRPF40BQ6NWY9 871 aaKnown RBP19.86■□□□□ 0.77
SHF-209ENST00000561091 CNKSR1Q969H4 720 aa19.86■□□□□ 0.77
SHF-209ENST00000561091 PUS3Q9BZE2 481 aaKnown RBP19.86■□□□□ 0.77
SHF-209ENST00000561091 SIL1Q9H173 461 aa19.86■□□□□ 0.77
SHF-209ENST00000561091 PIM2Q9P1W9 311 aa19.86■□□□□ 0.77
SHF-209ENST00000561091 IGHMBP2P38935 993 aaKnown RBP19.85■□□□□ 0.77
SHF-209ENST00000561091 TTLL6Q8N841 843 aa19.85■□□□□ 0.77
SHF-209ENST00000561091 ZNF219Q9P2Y4 722 aaPredicted RBP19.85■□□□□ 0.77
SHF-209ENST00000561091 ARFGEF1Q9Y6D6 1849 aa19.85■□□□□ 0.77
SHF-209ENST00000561091 PPEF1O14829 653 aaPredicted RBP19.84■□□□□ 0.77
SHF-209ENST00000561091 HMMRO75330 724 aa19.84■□□□□ 0.77
SHF-209ENST00000561091 LRRC24Q50LG9 513 aa19.84■□□□□ 0.77
SHF-209ENST00000561091 COPRSQ9NQ92 184 aa19.84■□□□□ 0.77
SHF-209ENST00000561091 BBOX1O75936 387 aa19.83■□□□□ 0.77
SHF-209ENST00000561091 OLFM4Q6UX06 510 aa19.83■□□□□ 0.77
SHF-209ENST00000561091 LDHAL6AQ6ZMR3 332 aa19.83■□□□□ 0.77
SHF-209ENST00000561091 MPHOSPH8Q99549 860 aa19.83■□□□□ 0.77
SHF-209ENST00000561091 SURF6O75683 361 aaKnown RBP19.82■□□□□ 0.76
SHF-209ENST00000561091 DALRD3Q5D0E6 543 aaKnown RBP19.82■□□□□ 0.76
SHF-209ENST00000561091 CNNM1Q9NRU3 951 aa19.82■□□□□ 0.76
SHF-209ENST00000561091 BSDC1Q9NW68 430 aaPredicted RBP19.82■□□□□ 0.76
SHF-209ENST00000561091 EYA2O00167 538 aa19.81■□□□□ 0.76
SHF-209ENST00000561091 IGHDP01880 384 aa19.81■□□□□ 0.76
SHF-209ENST00000561091 ATG9AQ7Z3C6 839 aa19.81■□□□□ 0.76
SHF-209ENST00000561091 BCS1LQ9Y276 419 aa19.81■□□□□ 0.76
SHF-209ENST00000561091 EXOC6BQ9Y2D4 811 aa19.81■□□□□ 0.76
SHF-209ENST00000561091 LTBP1Q14766 1721 aa19.8■□□□□ 0.76
SHF-209ENST00000561091 C21orf2O43822 256 aa19.8■□□□□ 0.76
SHF-209ENST00000561091 HDAC1Q13547 482 aaPredicted RBP19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms