RNA–Protein interactions for RNA: ENST00000560349.1

CARMIL3-203, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 1 (best)

Gene CARMIL3, Length 2,664 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-203ENST00000560349 TMX3Q96JJ7 454 aa17.03■□□□□ 0.32
CARMIL3-203ENST00000560349 NRAPQ86VF7 1730 aa17.03■□□□□ 0.32
CARMIL3-203ENST00000560349 ITPK1Q13572 414 aa17.03■□□□□ 0.32
CARMIL3-203ENST00000560349 NLRP10Q86W26 655 aa17.03■□□□□ 0.32
CARMIL3-203ENST00000560349 RAB3GAP1Q15042 981 aa17.02■□□□□ 0.32
CARMIL3-203ENST00000560349 CCDC57Q2TAC2 916 aa17.02■□□□□ 0.32
CARMIL3-203ENST00000560349 SEC62Q99442 399 aaKnown RBP17.02■□□□□ 0.32
CARMIL3-203ENST00000560349 COL15A1P39059 1388 aa17.02■□□□□ 0.31
CARMIL3-203ENST00000560349 ADCK5Q3MIX3 580 aa17.02■□□□□ 0.31
CARMIL3-203ENST00000560349 CCDC129Q6ZRS4 1044 aa17.02■□□□□ 0.31
CARMIL3-203ENST00000560349 UBN2Q6ZU65 1347 aa17.01■□□□□ 0.31
CARMIL3-203ENST00000560349 LOC102724428A0A0B4J2F2 783 aa17.01■□□□□ 0.31
CARMIL3-203ENST00000560349 CRKLP46109 303 aaKnown RBP17.01■□□□□ 0.31
CARMIL3-203ENST00000560349 KCNJ4P48050 445 aa17.01■□□□□ 0.31
CARMIL3-203ENST00000560349 SIK1P57059 783 aa17.01■□□□□ 0.31
CARMIL3-203ENST00000560349 TRMT112Q9UI30 125 aaKnown RBP17.01■□□□□ 0.31
CARMIL3-203ENST00000560349 TAF6LQ9Y6J9 622 aa17.01■□□□□ 0.31
CARMIL3-203ENST00000560349 EYA2O00167 538 aa17.01■□□□□ 0.31
CARMIL3-203ENST00000560349 TAF7LQ5H9L4 462 aa17.01■□□□□ 0.31
CARMIL3-203ENST00000560349 GREM2Q9H772 168 aa17.01■□□□□ 0.31
CARMIL3-203ENST00000560349 WNK3Q9BYP7 1800 aa17.01■□□□□ 0.31
CARMIL3-203ENST00000560349 ZBTB38Q8NAP3 1195 aaPredicted RBP17■□□□□ 0.31
CARMIL3-203ENST00000560349 RUFY2Q8WXA3 655 aa17■□□□□ 0.31
CARMIL3-203ENST00000560349 A0A1B0GUL7 405 aa17■□□□□ 0.31
CARMIL3-203ENST00000560349 PCCAP05165 728 aaPredicted RBP17■□□□□ 0.31
CARMIL3-203ENST00000560349 ADORA1P30542 326 aa17■□□□□ 0.31
CARMIL3-203ENST00000560349 THRAP3Q9Y2W1 955 aaKnown RBP17■□□□□ 0.31
CARMIL3-203ENST00000560349 GOLIM4O00461 696 aa16.99■□□□□ 0.31
CARMIL3-203ENST00000560349 ATP5JP18859 108 aa16.99■□□□□ 0.31
CARMIL3-203ENST00000560349 CASTP20810 708 aaKnown RBP16.99■□□□□ 0.31
CARMIL3-203ENST00000560349 ANAPC15P60006 121 aa16.99■□□□□ 0.31
CARMIL3-203ENST00000560349 INTS5Q6P9B9 1019 aaKnown RBP16.99■□□□□ 0.31
CARMIL3-203ENST00000560349 CCDC171Q6TFL3 1326 aa16.99■□□□□ 0.31
CARMIL3-203ENST00000560349 SLIT2O94813 1529 aa16.99■□□□□ 0.31
CARMIL3-203ENST00000560349 TCEANC2Q96MN5 208 aa16.99■□□□□ 0.31
CARMIL3-203ENST00000560349 SNRKQ9NRH2 765 aa16.99■□□□□ 0.31
CARMIL3-203ENST00000560349 RBM8AQ9Y5S9 174 aaKnown RBP16.99■□□□□ 0.31
CARMIL3-203ENST00000560349 GOLGB1Q14789 3259 aaKnown RBP16.98■□□□□ 0.31
CARMIL3-203ENST00000560349 IL15P40933 162 aaPredicted RBP16.98■□□□□ 0.31
CARMIL3-203ENST00000560349 CDCA7Q9BWT1 371 aaPredicted RBP16.98■□□□□ 0.31
CARMIL3-203ENST00000560349 CIZ1Q9ULV3 898 aaPredicted RBP16.98■□□□□ 0.31
CARMIL3-203ENST00000560349 LRP6O75581 1613 aa16.98■□□□□ 0.31
CARMIL3-203ENST00000560349 PALLDQ8WX93 1383 aa16.98■□□□□ 0.31
CARMIL3-203ENST00000560349 IRS4O14654 1257 aaPredicted RBP16.98■□□□□ 0.31
CARMIL3-203ENST00000560349 HCLS1P14317 486 aaPredicted RBP16.98■□□□□ 0.31
CARMIL3-203ENST00000560349 JAKMIP1Q96N16 626 aaKnown RBP16.98■□□□□ 0.31
CARMIL3-203ENST00000560349 ITGA6P23229 1130 aa16.97■□□□□ 0.31
CARMIL3-203ENST00000560349 IFIT5Q13325 482 aaKnown RBP16.97■□□□□ 0.31
CARMIL3-203ENST00000560349 CCDC87Q9NVE4 849 aa16.97■□□□□ 0.31
CARMIL3-203ENST00000560349 IL6STP40189 918 aaPredicted RBP16.97■□□□□ 0.31
CARMIL3-203ENST00000560349 TRIM28Q13263 835 aaKnown RBP16.97■□□□□ 0.31
CARMIL3-203ENST00000560349 PI16Q6UXB8 463 aa16.97■□□□□ 0.31
CARMIL3-203ENST00000560349 AK2P54819 239 aa16.96■□□□□ 0.31
CARMIL3-203ENST00000560349 FOXD4L6Q3SYB3 417 aaPredicted RBP16.96■□□□□ 0.31
CARMIL3-203ENST00000560349 FOXD4L3Q6VB84 417 aaPredicted RBP16.96■□□□□ 0.31
CARMIL3-203ENST00000560349 TTLL11Q8NHH1 800 aa16.96■□□□□ 0.31
CARMIL3-203ENST00000560349 FAM43AQ8N2R8 423 aa16.96■□□□□ 0.31
CARMIL3-203ENST00000560349 CEP126Q9P2H0 1117 aa16.96■□□□□ 0.31
CARMIL3-203ENST00000560349 EIF5P55010 431 aaKnown RBP16.95■□□□□ 0.3
CARMIL3-203ENST00000560349 FKBP4Q02790 459 aaKnown RBP eCLIP16.95■□□□□ 0.3
CARMIL3-203ENST00000560349 HAUS7Q99871 368 aa16.95■□□□□ 0.3
CARMIL3-203ENST00000560349 BCL9LQ86UU0 1499 aa16.95■□□□□ 0.3
CARMIL3-203ENST00000560349 SNAP23O00161 211 aa16.95■□□□□ 0.3
CARMIL3-203ENST00000560349 TRAK2O60296 914 aa16.95■□□□□ 0.3
CARMIL3-203ENST00000560349 CTSWP56202 376 aa16.95■□□□□ 0.3
CARMIL3-203ENST00000560349 HSP90AB3PQ58FF7 597 aa16.95■□□□□ 0.3
CARMIL3-203ENST00000560349 L1TD1Q5T7N2 865 aaKnown RBP16.95■□□□□ 0.3
CARMIL3-203ENST00000560349 CREB3L3Q68CJ9 461 aa16.95■□□□□ 0.3
CARMIL3-203ENST00000560349 HELBQ8NG08 1087 aaPredicted RBP16.95■□□□□ 0.3
CARMIL3-203ENST00000560349 ZNF609O15014 1411 aa16.95■□□□□ 0.3
CARMIL3-203ENST00000560349 LARGE1O95461 756 aa16.94■□□□□ 0.3
CARMIL3-203ENST00000560349 GORABQ5T7V8 394 aa16.94■□□□□ 0.3
CARMIL3-203ENST00000560349 SUSD4Q5VX71 490 aa16.94■□□□□ 0.3
CARMIL3-203ENST00000560349 LDHAL6AQ6ZMR3 332 aa16.94■□□□□ 0.3
CARMIL3-203ENST00000560349 BARGINQ6ZT62 677 aa16.94■□□□□ 0.3
CARMIL3-203ENST00000560349 ZDHHC9Q9Y397 364 aa16.94■□□□□ 0.3
CARMIL3-203ENST00000560349 SCARF1Q14162 830 aa16.94■□□□□ 0.3
CARMIL3-203ENST00000560349 PAG1Q9NWQ8 432 aa16.94■□□□□ 0.3
CARMIL3-203ENST00000560349 CSF1RP07333 972 aa16.93■□□□□ 0.3
CARMIL3-203ENST00000560349 IFIT1P09914 478 aaKnown RBP16.93■□□□□ 0.3
CARMIL3-203ENST00000560349 NECTIN1Q15223 517 aa16.93■□□□□ 0.3
CARMIL3-203ENST00000560349 RUFY3Q7L099 469 aa16.93■□□□□ 0.3
CARMIL3-203ENST00000560349 MYH14Q7Z406 1995 aaKnown RBP16.93■□□□□ 0.3
CARMIL3-203ENST00000560349 METTL24Q5JXM2 366 aa16.93■□□□□ 0.3
CARMIL3-203ENST00000560349 MAP4K1Q92918 833 aa16.93■□□□□ 0.3
CARMIL3-203ENST00000560349 XAGE2Q96GT9 111 aa16.93■□□□□ 0.3
CARMIL3-203ENST00000560349 GBP4Q96PP9 640 aa16.93■□□□□ 0.3
CARMIL3-203ENST00000560349 CNNM1Q9NRU3 951 aa16.93■□□□□ 0.3
CARMIL3-203ENST00000560349 USP21Q9UK80 565 aa16.93■□□□□ 0.3
CARMIL3-203ENST00000560349 MED23Q9ULK4 1368 aa16.93■□□□□ 0.3
CARMIL3-203ENST00000560349 FSD2A1L4K1 749 aa16.93■□□□□ 0.3
CARMIL3-203ENST00000560349 HIP1O00291 1037 aa16.93■□□□□ 0.3
CARMIL3-203ENST00000560349 SLC27A2O14975 620 aa16.93■□□□□ 0.3
CARMIL3-203ENST00000560349 XRCC6P12956 609 aaKnown RBP eCLIP16.93■□□□□ 0.3
CARMIL3-203ENST00000560349 TTC14Q96N46 770 aa16.93■□□□□ 0.3
CARMIL3-203ENST00000560349 NUP98P52948 1817 aa16.92■□□□□ 0.3
CARMIL3-203ENST00000560349 BAG4O95429 457 aaKnown RBP16.92■□□□□ 0.3
CARMIL3-203ENST00000560349 VPS53Q5VIR6 699 aa16.92■□□□□ 0.3
CARMIL3-203ENST00000560349 MCTP1Q6DN14 999 aa16.92■□□□□ 0.3
CARMIL3-203ENST00000560349 CIAO1O76071 339 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms