RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 CDC37L1Q7L3B6 337 aa22.02■■□□□ 1.12
HERC1-207ENST00000560316 TNRC18O15417 2968 aaPredicted RBP22.02■■□□□ 1.11
HERC1-207ENST00000560316 PARP10Q53GL7 1025 aa22.01■■□□□ 1.11
HERC1-207ENST00000560316 ZC3H15Q8WU90 426 aaKnown RBP22.01■■□□□ 1.11
HERC1-207ENST00000560316 THUMPD2Q9BTF0 503 aaKnown RBP22.01■■□□□ 1.11
HERC1-207ENST00000560316 UTP14AQ9BVJ6 771 aaKnown RBP22.01■■□□□ 1.11
HERC1-207ENST00000560316 KIAA2012Q0VF49 1180 aa22■■□□□ 1.11
HERC1-207ENST00000560316 SLC10A5Q5PT55 438 aa22■■□□□ 1.11
HERC1-207ENST00000560316 USP48Q86UV5 1035 aa22■■□□□ 1.11
HERC1-207ENST00000560316 MPNDQ8N594 471 aa22■■□□□ 1.11
HERC1-207ENST00000560316 CNOT7Q9UIV1 285 aaKnown RBP22■■□□□ 1.11
HERC1-207ENST00000560316 CDHR2Q9BYE9 1310 aa22■■□□□ 1.11
HERC1-207ENST00000560316 HUNKP57058 714 aa21.99■■□□□ 1.11
HERC1-207ENST00000560316 NOGQ13253 232 aa21.99■■□□□ 1.11
HERC1-207ENST00000560316 TNIP1Q15025 636 aa21.99■■□□□ 1.11
HERC1-207ENST00000560316 SP8Q8IXZ3 490 aa21.99■■□□□ 1.11
HERC1-207ENST00000560316 YDJCA8MPS7 323 aa21.98■■□□□ 1.11
HERC1-207ENST00000560316 BBOX1O75936 387 aa21.98■■□□□ 1.11
HERC1-207ENST00000560316 DLG5Q8TDM6 1919 aa21.98■■□□□ 1.11
HERC1-207ENST00000560316 HCLS1P14317 486 aaPredicted RBP21.97■■□□□ 1.11
HERC1-207ENST00000560316 MICALL2Q8IY33 904 aa21.97■■□□□ 1.11
HERC1-207ENST00000560316 H7C1D1 291 aa21.96■■□□□ 1.11
HERC1-207ENST00000560316 LRP10Q7Z4F1 713 aa21.96■■□□□ 1.11
HERC1-207ENST00000560316 ZBTB12Q9Y330 459 aaPredicted RBP21.96■■□□□ 1.11
HERC1-207ENST00000560316 ERBB4Q15303 1308 aa21.96■■□□□ 1.11
HERC1-207ENST00000560316 ANXA1P04083 346 aa21.95■■□□□ 1.1
HERC1-207ENST00000560316 NEFMP07197 916 aa21.94■■□□□ 1.1
HERC1-207ENST00000560316 EIF2S2P20042 333 aaKnown RBP21.94■■□□□ 1.1
HERC1-207ENST00000560316 SOX10P56693 466 aa21.94■■□□□ 1.1
HERC1-207ENST00000560316 PDIA6Q15084 440 aa21.94■■□□□ 1.1
HERC1-207ENST00000560316 PROSER3Q2NL68 480 aa21.94■■□□□ 1.1
HERC1-207ENST00000560316 SAMD7Q7Z3H4 446 aa21.94■■□□□ 1.1
HERC1-207ENST00000560316 LAMB2P55268 1798 aa21.94■■□□□ 1.1
HERC1-207ENST00000560316 FAM155AB1AL88 458 aaPredicted RBP21.93■■□□□ 1.1
HERC1-207ENST00000560316 PDE4DIPQ5VU43 2346 aa21.93■■□□□ 1.1
HERC1-207ENST00000560316 RGMBQ6NW40 437 aa21.93■■□□□ 1.1
HERC1-207ENST00000560316 DDX46Q7L014 1031 aaKnown RBP21.93■■□□□ 1.1
HERC1-207ENST00000560316 EGFRP00533 1210 aa21.92■■□□□ 1.1
HERC1-207ENST00000560316 GRAPQ13588 217 aa21.92■■□□□ 1.1
HERC1-207ENST00000560316 NFE2L2Q16236 605 aa21.92■■□□□ 1.1
HERC1-207ENST00000560316 GRAPLQ8TC17 118 aaPredicted RBP21.92■■□□□ 1.1
HERC1-207ENST00000560316 PLEKHF1Q96S99 279 aa21.92■■□□□ 1.1
HERC1-207ENST00000560316 PSMD14O00487 310 aa21.91■■□□□ 1.1
HERC1-207ENST00000560316 TBC1D10BQ4KMP7 808 aaPredicted RBP21.91■■□□□ 1.1
HERC1-207ENST00000560316 KRT26Q7Z3Y9 468 aa21.91■■□□□ 1.1
HERC1-207ENST00000560316 NLRP10Q86W26 655 aa21.91■■□□□ 1.1
HERC1-207ENST00000560316 ZNF428Q96B54 188 aa21.91■■□□□ 1.1
HERC1-207ENST00000560316 GBA2Q9HCG7 927 aaPredicted RBP21.91■■□□□ 1.1
HERC1-207ENST00000560316 DUOX1Q9NRD9 1551 aa21.91■■□□□ 1.1
HERC1-207ENST00000560316 TAF1P21675 1872 aa21.9■■□□□ 1.1
HERC1-207ENST00000560316 ANKRD36CQ5JPF3 1778 aa21.9■■□□□ 1.1
HERC1-207ENST00000560316 ADM5C9JUS6 153 aa21.9■■□□□ 1.1
HERC1-207ENST00000560316 KIF23Q02241 960 aaPredicted RBP21.9■■□□□ 1.1
HERC1-207ENST00000560316 DBNDD1Q9H9R9 158 aa21.9■■□□□ 1.1
HERC1-207ENST00000560316 SAGE1Q9NXZ1 904 aa21.9■■□□□ 1.1
HERC1-207ENST00000560316 TRMT112Q9UI30 125 aaKnown RBP21.9■■□□□ 1.1
HERC1-207ENST00000560316 TSPYL4Q9UJ04 414 aa21.9■■□□□ 1.1
HERC1-207ENST00000560316 TRPA1O75762 1119 aa21.89■■□□□ 1.09
HERC1-207ENST00000560316 AIMP1Q12904 312 aaKnown RBP21.89■■□□□ 1.09
HERC1-207ENST00000560316 RBM26Q5T8P6 1007 aaKnown RBP21.89■■□□□ 1.09
HERC1-207ENST00000560316 C2orf69Q8N8R5 385 aa21.89■■□□□ 1.09
HERC1-207ENST00000560316 DPF2Q92785 391 aa21.89■■□□□ 1.09
HERC1-207ENST00000560316 RNF186Q9NXI6 227 aa21.89■■□□□ 1.09
HERC1-207ENST00000560316 ZNF157P51786 506 aaPredicted RBP21.88■■□□□ 1.09
HERC1-207ENST00000560316 COPS6Q7L5N1 327 aa21.88■■□□□ 1.09
HERC1-207ENST00000560316 NECTIN2Q92692 538 aa21.88■■□□□ 1.09
HERC1-207ENST00000560316 CCDC102AQ96A19 550 aa21.88■■□□□ 1.09
HERC1-207ENST00000560316 SH3TC1Q8TE82 1336 aa21.87■■□□□ 1.09
HERC1-207ENST00000560316 RIMBP2O15034 1052 aa21.87■■□□□ 1.09
HERC1-207ENST00000560316 WASHC4Q2M389 1173 aa21.87■■□□□ 1.09
HERC1-207ENST00000560316 HSP90AB3PQ58FF7 597 aa21.87■■□□□ 1.09
HERC1-207ENST00000560316 XAGE3Q8WTP9 111 aa21.87■■□□□ 1.09
HERC1-207ENST00000560316 DCPSQ96C86 337 aaKnown RBP21.87■■□□□ 1.09
HERC1-207ENST00000560316 KCNQ5Q9NR82 932 aa21.87■■□□□ 1.09
HERC1-207ENST00000560316 POLR2AP24928 1970 aaKnown RBP21.87■■□□□ 1.09
HERC1-207ENST00000560316 TCIRG1Q13488 830 aa21.86■■□□□ 1.09
HERC1-207ENST00000560316 TMC4Q7Z404 712 aa21.85■■□□□ 1.09
HERC1-207ENST00000560316 NSFL1CQ9UNZ2 370 aaKnown RBP21.85■■□□□ 1.09
HERC1-207ENST00000560316 DOK7Q18PE1 504 aa21.84■■□□□ 1.09
HERC1-207ENST00000560316 CELF1Q92879 486 aaKnown RBP21.84■■□□□ 1.09
HERC1-207ENST00000560316 CSRNP1Q96S65 589 aa21.84■■□□□ 1.09
HERC1-207ENST00000560316 POLLQ9UGP5 575 aa21.84■■□□□ 1.09
HERC1-207ENST00000560316 RTL9Q8NET4 1388 aa21.84■■□□□ 1.09
HERC1-207ENST00000560316 LRRC37AA6NMS7 1700 aa21.83■■□□□ 1.09
HERC1-207ENST00000560316 MAPK8IP3Q9UPT6 1336 aa21.83■■□□□ 1.09
HERC1-207ENST00000560316 C6orf229H3BNL8 230 aa21.83■■□□□ 1.09
HERC1-207ENST00000560316 ECE2O60344 883 aa21.83■■□□□ 1.09
HERC1-207ENST00000560316 SLC10A3P09131 477 aa21.83■■□□□ 1.09
HERC1-207ENST00000560316 RPS12P25398 132 aaKnown RBP21.82■■□□□ 1.08
HERC1-207ENST00000560316 GPSM2P81274 684 aa21.82■■□□□ 1.08
HERC1-207ENST00000560316 KIF4BQ2VIQ3 1234 aa21.82■■□□□ 1.08
HERC1-207ENST00000560316 ASTN2O75129 1339 aaPredicted RBP21.81■■□□□ 1.08
HERC1-207ENST00000560316 AKAP11Q9UKA4 1901 aa21.81■■□□□ 1.08
HERC1-207ENST00000560316 CTU1Q7Z7A3 348 aaKnown RBP21.81■■□□□ 1.08
HERC1-207ENST00000560316 GGA3Q9NZ52 723 aa21.81■■□□□ 1.08
HERC1-207ENST00000560316 COL4A1P02462 1669 aa21.8■■□□□ 1.08
HERC1-207ENST00000560316 SULF1Q8IWU6 871 aa21.8■■□□□ 1.08
HERC1-207ENST00000560316 PRPF38BQ5VTL8 546 aaKnown RBP21.79■■□□□ 1.08
HERC1-207ENST00000560316 CDCA5Q96FF9 252 aa21.79■■□□□ 1.08
HERC1-207ENST00000560316 FAM89AQ96GI7 184 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 377.2 ms