RNA–Protein interactions for RNA: ENST00000560273.2

TUBBP8-201, Transcript of tubulin beta class I pseudogene 8, humanhuman

BASIC

Gene TUBBP8, Length 1,232 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBBP8-201ENST00000560273 HOXA10P31260 410 aaPredicted RBP11.87□□□□□ -0.51
TUBBP8-201ENST00000560273 CASP7P55210 303 aa11.87□□□□□ -0.51
TUBBP8-201ENST00000560273 CCDC152Q4G0S7 254 aa11.87□□□□□ -0.51
TUBBP8-201ENST00000560273 USP44Q9H0E7 712 aa11.87□□□□□ -0.51
TUBBP8-201ENST00000560273 TNNQ9UQP3 1299 aa11.87□□□□□ -0.51
TUBBP8-201ENST00000560273 NUP98P52948 1817 aa11.87□□□□□ -0.51
TUBBP8-201ENST00000560273 PLIN1O60240 522 aa11.86□□□□□ -0.51
TUBBP8-201ENST00000560273 GRIN3BO60391 1043 aa11.86□□□□□ -0.51
TUBBP8-201ENST00000560273 CTSWP56202 376 aa11.86□□□□□ -0.51
TUBBP8-201ENST00000560273 TMEM57Q8N5G2 664 aa11.86□□□□□ -0.51
TUBBP8-201ENST00000560273 CCDC85AQ96PX6 553 aaPredicted RBP11.86□□□□□ -0.51
TUBBP8-201ENST00000560273 CRAMP1Q96RY5 1269 aa11.86□□□□□ -0.51
TUBBP8-201ENST00000560273 PLA2G12BQ9BX93 195 aa11.86□□□□□ -0.51
TUBBP8-201ENST00000560273 HDAC5Q9UQL6 1122 aa11.86□□□□□ -0.51
TUBBP8-201ENST00000560273 NRXN2Q9P2S2 1712 aa11.86□□□□□ -0.51
TUBBP8-201ENST00000560273 UTYO14607 1347 aa11.86□□□□□ -0.51
TUBBP8-201ENST00000560273 BBOX1O75936 387 aa11.85□□□□□ -0.51
TUBBP8-201ENST00000560273 UBTFL1P0CB47 393 aaPredicted RBP11.85□□□□□ -0.51
TUBBP8-201ENST00000560273 PRPF40BQ6NWY9 871 aaKnown RBP11.85□□□□□ -0.51
TUBBP8-201ENST00000560273 TTLL11Q8NHH1 800 aa11.85□□□□□ -0.51
TUBBP8-201ENST00000560273 TMX4Q9H1E5 349 aaPredicted RBP11.85□□□□□ -0.51
TUBBP8-201ENST00000560273 ARFGEF2Q9Y6D5 1785 aa11.84□□□□□ -0.51
TUBBP8-201ENST00000560273 C21orf2O43822 256 aa11.84□□□□□ -0.51
TUBBP8-201ENST00000560273 CSF1RP07333 972 aa11.84□□□□□ -0.51
TUBBP8-201ENST00000560273 GNAI3P08754 354 aa11.84□□□□□ -0.51
TUBBP8-201ENST00000560273 YBX3P16989 372 aaKnown RBP eCLIP11.84□□□□□ -0.51
TUBBP8-201ENST00000560273 GRAPQ13588 217 aa11.84□□□□□ -0.51
TUBBP8-201ENST00000560273 ITPRIPQ8IWB1 547 aa11.84□□□□□ -0.51
TUBBP8-201ENST00000560273 GRAPLQ8TC17 118 aaPredicted RBP11.84□□□□□ -0.51
TUBBP8-201ENST00000560273 PANK1Q8TE04 598 aa11.84□□□□□ -0.51
TUBBP8-201ENST00000560273 SUCLG2Q96I99 432 aa11.84□□□□□ -0.51
TUBBP8-201ENST00000560273 CHMP3Q9Y3E7 222 aa11.84□□□□□ -0.51
TUBBP8-201ENST00000560273 CACNA1FO60840 1977 aa11.84□□□□□ -0.51
TUBBP8-201ENST00000560273 PPEF1O14829 653 aaPredicted RBP11.83□□□□□ -0.52
TUBBP8-201ENST00000560273 RLBP1P12271 317 aa11.83□□□□□ -0.52
TUBBP8-201ENST00000560273 FOXO4P98177 505 aa11.83□□□□□ -0.52
TUBBP8-201ENST00000560273 PDE3AQ14432 1141 aa11.83□□□□□ -0.52
TUBBP8-201ENST00000560273 EPHA10Q5JZY3 1008 aa11.83□□□□□ -0.52
TUBBP8-201ENST00000560273 SOGA3Q5TF21 947 aa11.83□□□□□ -0.52
TUBBP8-201ENST00000560273 LMBR1LQ6UX01 489 aa11.83□□□□□ -0.52
TUBBP8-201ENST00000560273 ARHGAP27Q6ZUM4 889 aa11.83□□□□□ -0.52
TUBBP8-201ENST00000560273 ZNF784Q8NCA9 323 aaPredicted RBP11.83□□□□□ -0.52
TUBBP8-201ENST00000560273 MEIS3Q99687 375 aa11.83□□□□□ -0.52
TUBBP8-201ENST00000560273 GREM2Q9H772 168 aa11.83□□□□□ -0.52
TUBBP8-201ENST00000560273 SEC31BQ9NQW1 1179 aa11.83□□□□□ -0.52
TUBBP8-201ENST00000560273 AFDNP55196 1824 aaKnown RBP11.83□□□□□ -0.52
TUBBP8-201ENST00000560273 ANKRD18BA2A2Z9 1011 aa11.82□□□□□ -0.52
TUBBP8-201ENST00000560273 RPS8P62241 208 aaKnown RBP11.82□□□□□ -0.52
TUBBP8-201ENST00000560273 IFIT5Q13325 482 aaKnown RBP11.82□□□□□ -0.52
TUBBP8-201ENST00000560273 CC2D2BQ6DHV5 1058 aa11.82□□□□□ -0.52
TUBBP8-201ENST00000560273 TMC4Q7Z404 712 aa11.82□□□□□ -0.52
TUBBP8-201ENST00000560273 CELF1Q92879 486 aaKnown RBP11.82□□□□□ -0.52
TUBBP8-201ENST00000560273 KAZALD1Q96I82 304 aa11.82□□□□□ -0.52
TUBBP8-201ENST00000560273 CDC5LQ99459 802 aaKnown RBP11.82□□□□□ -0.52
TUBBP8-201ENST00000560273 BICC1Q9H694 974 aaKnown RBP11.82□□□□□ -0.52
TUBBP8-201ENST00000560273 GNAI2P04899 355 aa11.81□□□□□ -0.52
TUBBP8-201ENST00000560273 ITGA6P23229 1130 aa11.81□□□□□ -0.52
TUBBP8-201ENST00000560273 RRP1P56182 461 aaKnown RBP11.81□□□□□ -0.52
TUBBP8-201ENST00000560273 CCDC57Q2TAC2 916 aa11.81□□□□□ -0.52
TUBBP8-201ENST00000560273 FAM161AQ3B820 660 aa11.81□□□□□ -0.52
TUBBP8-201ENST00000560273 ANKRD18AQ8IVF6 992 aa11.81□□□□□ -0.52
TUBBP8-201ENST00000560273 SP8Q8IXZ3 490 aa11.81□□□□□ -0.52
TUBBP8-201ENST00000560273 C7orf43Q8WVR3 580 aa11.81□□□□□ -0.52
TUBBP8-201ENST00000560273 CHMP4BQ9H444 224 aaKnown RBP11.81□□□□□ -0.52
TUBBP8-201ENST00000560273 COG6Q9Y2V7 657 aa11.81□□□□□ -0.52
TUBBP8-201ENST00000560273 ATP6V0A2Q9Y487 856 aa11.81□□□□□ -0.52
TUBBP8-201ENST00000560273 ANKRD36CQ5JPF3 1778 aa11.81□□□□□ -0.52
TUBBP8-201ENST00000560273 ZBTB7BO15156 539 aaPredicted RBP11.8□□□□□ -0.52
TUBBP8-201ENST00000560273 IGHMBP2P38935 993 aaKnown RBP11.8□□□□□ -0.52
TUBBP8-201ENST00000560273 MVPQ14764 893 aaKnown RBP11.8□□□□□ -0.52
TUBBP8-201ENST00000560273 RABL6Q3YEC7 729 aaPredicted RBP11.8□□□□□ -0.52
TUBBP8-201ENST00000560273 GRIPAP1Q4V328 841 aa11.8□□□□□ -0.52
TUBBP8-201ENST00000560273 CCDC93Q567U6 631 aa11.8□□□□□ -0.52
TUBBP8-201ENST00000560273 TAF7LQ5H9L4 462 aa11.8□□□□□ -0.52
TUBBP8-201ENST00000560273 RTKN2Q8IZC4 609 aa11.8□□□□□ -0.52
TUBBP8-201ENST00000560273 MPHOSPH8Q99549 860 aa11.8□□□□□ -0.52
TUBBP8-201ENST00000560273 DDX19BQ9UMR2 479 aa11.8□□□□□ -0.52
TUBBP8-201ENST00000560273 LRRFIP2Q9Y608 721 aaKnown RBP11.8□□□□□ -0.52
TUBBP8-201ENST00000560273 RTL9Q8NET4 1388 aa11.79□□□□□ -0.52
TUBBP8-201ENST00000560273 KIF13BQ9NQT8 1826 aa11.79□□□□□ -0.52
TUBBP8-201ENST00000560273 C20orf194Q5TEA3 1177 aa11.79□□□□□ -0.52
TUBBP8-201ENST00000560273 OLFM4Q6UX06 510 aa11.79□□□□□ -0.52
TUBBP8-201ENST00000560273 ANKRD44Q8N8A2 993 aa11.79□□□□□ -0.52
TUBBP8-201ENST00000560273 BSDC1Q9NW68 430 aaPredicted RBP11.78□□□□□ -0.52
TUBBP8-201ENST00000560273 SUPT16HQ9Y5B9 1047 aaKnown RBP11.78□□□□□ -0.52
TUBBP8-201ENST00000560273 TNRC6CQ9HCJ0 1690 aaKnown RBP11.78□□□□□ -0.52
TUBBP8-201ENST00000560273 ANKRD31Q8N7Z5 1873 aa11.77□□□□□ -0.53
TUBBP8-201ENST00000560273 C1QTNF8P60827 252 aa11.77□□□□□ -0.53
TUBBP8-201ENST00000560273 DPP8Q6V1X1 898 aaPredicted RBP11.77□□□□□ -0.53
TUBBP8-201ENST00000560273 LDHAL6AQ6ZMR3 332 aa11.77□□□□□ -0.53
TUBBP8-201ENST00000560273 MPNDQ8N594 471 aa11.77□□□□□ -0.53
TUBBP8-201ENST00000560273 TAOK3Q9H2K8 898 aa11.77□□□□□ -0.53
TUBBP8-201ENST00000560273 NSFL1CQ9UNZ2 370 aaKnown RBP11.77□□□□□ -0.53
TUBBP8-201ENST00000560273 N4BP2Q86UW6 1770 aaPredicted RBP11.77□□□□□ -0.53
TUBBP8-201ENST00000560273 CHD4Q14839 1912 aa11.76□□□□□ -0.53
TUBBP8-201ENST00000560273 NFKBIEO00221 500 aa11.76□□□□□ -0.53
TUBBP8-201ENST00000560273 SRGAP3O43295 1099 aa11.76□□□□□ -0.53
TUBBP8-201ENST00000560273 FKBP4Q02790 459 aaKnown RBP eCLIP11.76□□□□□ -0.53
TUBBP8-201ENST00000560273 IFFO2Q5TF58 517 aa11.76□□□□□ -0.53
TUBBP8-201ENST00000560273 ZNF594Q96JF6 807 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms