RNA–Protein interactions for RNA: ENST00000560131.1

TPM1-222, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-222ENST00000560131 USP5P45974 858 aa6.88□□□□□ -1.31
TPM1-222ENST00000560131 RAD51AP2Q09MP3 1159 aa6.88□□□□□ -1.31
TPM1-222ENST00000560131 TEAD4Q15561 434 aa6.88□□□□□ -1.31
TPM1-222ENST00000560131 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.88□□□□□ -1.31
TPM1-222ENST00000560131 C11orf91Q3C1V1 193 aa6.88□□□□□ -1.31
TPM1-222ENST00000560131 NT5DC4Q86YG4 428 aa6.88□□□□□ -1.31
TPM1-222ENST00000560131 GALNT6Q8NCL4 622 aa6.88□□□□□ -1.31
TPM1-222ENST00000560131 RNF34Q969K3 372 aa6.88□□□□□ -1.31
TPM1-222ENST00000560131 POLIQ9UNA4 740 aa6.88□□□□□ -1.31
TPM1-222ENST00000560131 GCC2Q8IWJ2 1684 aa6.87□□□□□ -1.31
TPM1-222ENST00000560131 THOC2Q8NI27 1593 aaKnown RBP6.87□□□□□ -1.31
TPM1-222ENST00000560131 HMGXB3Q12766 1538 aa6.87□□□□□ -1.31
TPM1-222ENST00000560131 CASKIN1Q8WXD9 1431 aa6.87□□□□□ -1.31
TPM1-222ENST00000560131 SERTM1A2A2V5 107 aa6.87□□□□□ -1.31
TPM1-222ENST00000560131 IL2RAP01589 272 aa6.87□□□□□ -1.31
TPM1-222ENST00000560131 CANXP27824 592 aaKnown RBP6.87□□□□□ -1.31
TPM1-222ENST00000560131 HIRAP54198 1017 aaPredicted RBP6.87□□□□□ -1.31
TPM1-222ENST00000560131 ENOX2Q16206 610 aaKnown RBP6.87□□□□□ -1.31
TPM1-222ENST00000560131 ATCAYQ86WG3 371 aa6.87□□□□□ -1.31
TPM1-222ENST00000560131 GJD3Q8N144 294 aa6.87□□□□□ -1.31
TPM1-222ENST00000560131 ITPKCQ96DU7 683 aa6.87□□□□□ -1.31
TPM1-222ENST00000560131 DCAF5Q96JK2 942 aa6.87□□□□□ -1.31
TPM1-222ENST00000560131 ESYT1Q9BSJ8 1104 aa6.87□□□□□ -1.31
TPM1-222ENST00000560131 RAB6BQ9NRW1 208 aa6.87□□□□□ -1.31
TPM1-222ENST00000560131 RNF19AQ9NV58 838 aa6.87□□□□□ -1.31
TPM1-222ENST00000560131 PGPEP1Q9NXJ5 209 aa6.87□□□□□ -1.31
TPM1-222ENST00000560131 VTI1BQ9UEU0 232 aa6.87□□□□□ -1.31
TPM1-222ENST00000560131 IQSEC3Q9UPP2 1182 aaPredicted RBP6.87□□□□□ -1.31
TPM1-222ENST00000560131 HRH3Q9Y5N1 445 aa6.87□□□□□ -1.31
TPM1-222ENST00000560131 PCF11O94913 1555 aaKnown RBP6.86□□□□□ -1.31
TPM1-222ENST00000560131 FGD6Q6ZV73 1430 aa6.86□□□□□ -1.31
TPM1-222ENST00000560131 TCERG1O14776 1098 aaKnown RBP6.86□□□□□ -1.31
TPM1-222ENST00000560131 NOS2P35228 1153 aa6.86□□□□□ -1.31
TPM1-222ENST00000560131 PTSQ03393 145 aa6.86□□□□□ -1.31
TPM1-222ENST00000560131 TLR1Q15399 786 aa6.86□□□□□ -1.31
TPM1-222ENST00000560131 FAM26DQ5JW98 314 aa6.86□□□□□ -1.31
TPM1-222ENST00000560131 LINC00528Q8N1L1 170 aa6.86□□□□□ -1.31
TPM1-222ENST00000560131 NBPF15Q8N660 670 aa6.86□□□□□ -1.31
TPM1-222ENST00000560131 SLC43A3Q8NBI5 491 aa6.86□□□□□ -1.31
TPM1-222ENST00000560131 CNKSR1Q969H4 720 aa6.86□□□□□ -1.31
TPM1-222ENST00000560131 NGLY1Q96IV0 654 aa6.86□□□□□ -1.31
TPM1-222ENST00000560131 TGIF2Q9GZN2 237 aa6.86□□□□□ -1.31
TPM1-222ENST00000560131 PRKRIP1Q9H875 184 aaPredicted RBP6.86□□□□□ -1.31
TPM1-222ENST00000560131 ARHGEF10LQ9HCE6 1279 aa6.86□□□□□ -1.31
TPM1-222ENST00000560131 EMILIN1Q9Y6C2 1016 aa6.86□□□□□ -1.31
TPM1-222ENST00000560131 USP3Q9Y6I4 520 aa6.86□□□□□ -1.31
TPM1-222ENST00000560131 PNMA6FA0A0J9YX94 578 aa6.85□□□□□ -1.31
TPM1-222ENST00000560131 PHF20L1A8MW92 1017 aa6.85□□□□□ -1.31
TPM1-222ENST00000560131 EML1O00423 815 aa6.85□□□□□ -1.31
TPM1-222ENST00000560131 PROCP04070 461 aa6.85□□□□□ -1.31
TPM1-222ENST00000560131 ITGB2P05107 769 aa6.85□□□□□ -1.31
TPM1-222ENST00000560131 FANCCQ00597 558 aa6.85□□□□□ -1.31
TPM1-222ENST00000560131 MAP3K10Q02779 954 aa6.85□□□□□ -1.31
TPM1-222ENST00000560131 DNM1Q05193 864 aaKnown RBP6.85□□□□□ -1.31
TPM1-222ENST00000560131 RTN1Q16799 776 aa6.85□□□□□ -1.31
TPM1-222ENST00000560131 ALDH16A1Q8IZ83 802 aa6.85□□□□□ -1.31
TPM1-222ENST00000560131 EDEM1Q92611 657 aa6.85□□□□□ -1.31
TPM1-222ENST00000560131 FRMD6Q96NE9 622 aa6.85□□□□□ -1.31
TPM1-222ENST00000560131 SETDB2Q96T68 719 aa6.85□□□□□ -1.31
TPM1-222ENST00000560131 NUDCQ9Y266 331 aa6.85□□□□□ -1.31
TPM1-222ENST00000560131 HCN4Q9Y3Q4 1203 aa6.85□□□□□ -1.31
TPM1-222ENST00000560131 FGD5Q6ZNL6 1462 aa6.85□□□□□ -1.31
TPM1-222ENST00000560131 FMN1Q68DA7 1419 aa6.84□□□□□ -1.31
TPM1-222ENST00000560131 CCDC7Q96M83 1385 aa6.84□□□□□ -1.31
TPM1-222ENST00000560131 PDGFAP04085 211 aa6.84□□□□□ -1.31
TPM1-222ENST00000560131 GNA15P30679 374 aa6.84□□□□□ -1.31
TPM1-222ENST00000560131 ZNF76P36508 570 aa6.84□□□□□ -1.31
TPM1-222ENST00000560131 LYPD4Q6UWN0 246 aa6.84□□□□□ -1.31
TPM1-222ENST00000560131 ETFBKMTQ8IXQ9 262 aa6.84□□□□□ -1.31
TPM1-222ENST00000560131 VWA5B2Q8N398 1253 aa6.84□□□□□ -1.31
TPM1-222ENST00000560131 MEIOBQ8N635 442 aa6.84□□□□□ -1.31
TPM1-222ENST00000560131 FBF1Q8TES7 1133 aa6.84□□□□□ -1.31
TPM1-222ENST00000560131 IFT43Q96FT9 208 aa6.84□□□□□ -1.31
TPM1-222ENST00000560131 CABP1Q9NZU7 370 aa6.84□□□□□ -1.31
TPM1-222ENST00000560131 ZNF232Q9UNY5 417 aa6.84□□□□□ -1.31
TPM1-222ENST00000560131 NAIPQ13075 1403 aa6.84□□□□□ -1.32
TPM1-222ENST00000560131 ARID4BQ4LE39 1312 aaPredicted RBP6.83□□□□□ -1.32
TPM1-222ENST00000560131 ZMYM4Q5VZL5 1548 aa6.83□□□□□ -1.32
TPM1-222ENST00000560131 PCSK2P16519 638 aa6.83□□□□□ -1.32
TPM1-222ENST00000560131 ZAP70P43403 619 aa6.83□□□□□ -1.32
TPM1-222ENST00000560131 CENPCQ03188 943 aa6.83□□□□□ -1.32
TPM1-222ENST00000560131 CLN3Q13286 438 aa6.83□□□□□ -1.32
TPM1-222ENST00000560131 DGKZQ13574 1117 aa6.83□□□□□ -1.32
TPM1-222ENST00000560131 SV2AQ7L0J3 742 aa6.83□□□□□ -1.32
TPM1-222ENST00000560131 CCDC155Q8N6L0 562 aa6.83□□□□□ -1.32
TPM1-222ENST00000560131 ZDHHC1Q8WTX9 485 aa6.83□□□□□ -1.32
TPM1-222ENST00000560131 L3MBTL2Q969R5 705 aa6.83□□□□□ -1.32
TPM1-222ENST00000560131 SPATA32Q96LK8 384 aa6.83□□□□□ -1.32
TPM1-222ENST00000560131 CSRNP1Q96S65 589 aa6.83□□□□□ -1.32
TPM1-222ENST00000560131 TANGO6Q9C0B7 1094 aa6.83□□□□□ -1.32
TPM1-222ENST00000560131 ENAMQ9NRM1 1142 aa6.83□□□□□ -1.32
TPM1-222ENST00000560131 AK5Q9Y6K8 562 aa6.83□□□□□ -1.32
TPM1-222ENST00000560131 SPATA31E1Q6ZUB1 1445 aa6.83□□□□□ -1.32
TPM1-222ENST00000560131 MIA2Q96PC5 1412 aa6.83□□□□□ -1.32
TPM1-222ENST00000560131 INSRP06213 1382 aa6.82□□□□□ -1.32
TPM1-222ENST00000560131 CADPSQ9ULU8 1353 aa6.82□□□□□ -1.32
TPM1-222ENST00000560131 KIF21AQ7Z4S6 1674 aa6.82□□□□□ -1.32
TPM1-222ENST00000560131 CFTRP13569 1480 aa6.82□□□□□ -1.32
TPM1-222ENST00000560131 TCOF1Q13428 1488 aaKnown RBP6.82□□□□□ -1.32
TPM1-222ENST00000560131 SMARCA5O60264 1052 aaPredicted RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms