RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 SUPT20HQ8NEM7 779 aa26.8■■□□□ 1.88
PSEN1-225ENST00000560005 ABCC4O15439 1325 aa26.8■■□□□ 1.88
PSEN1-225ENST00000560005 TNRC18O15417 2968 aaPredicted RBP26.8■■□□□ 1.88
PSEN1-225ENST00000560005 DGKZQ13574 1117 aa26.79■■□□□ 1.88
PSEN1-225ENST00000560005 BCL2L13Q9BXK5 485 aa26.79■■□□□ 1.88
PSEN1-225ENST00000560005 RTFDC1Q9BY42 306 aaPredicted RBP26.79■■□□□ 1.88
PSEN1-225ENST00000560005 HIRAP54198 1017 aaPredicted RBP26.78■■□□□ 1.88
PSEN1-225ENST00000560005 DPP8Q6V1X1 898 aaPredicted RBP26.78■■□□□ 1.88
PSEN1-225ENST00000560005 FAM9BQ8IZU0 186 aa26.78■■□□□ 1.88
PSEN1-225ENST00000560005 CDHR2Q9BYE9 1310 aa26.77■■□□□ 1.88
PSEN1-225ENST00000560005 RAD17O75943 681 aa26.77■■□□□ 1.88
PSEN1-225ENST00000560005 PARP10Q53GL7 1025 aa26.77■■□□□ 1.88
PSEN1-225ENST00000560005 TRPM4Q8TD43 1214 aa26.77■■□□□ 1.88
PSEN1-225ENST00000560005 ZC3H15Q8WU90 426 aaKnown RBP26.77■■□□□ 1.88
PSEN1-225ENST00000560005 CDC37L1Q7L3B6 337 aa26.76■■□□□ 1.87
PSEN1-225ENST00000560005 UTP14AQ9BVJ6 771 aaKnown RBP26.76■■□□□ 1.87
PSEN1-225ENST00000560005 DLG5Q8TDM6 1919 aa26.76■■□□□ 1.87
PSEN1-225ENST00000560005 KIAA2012Q0VF49 1180 aa26.75■■□□□ 1.87
PSEN1-225ENST00000560005 SLC10A5Q5PT55 438 aa26.75■■□□□ 1.87
PSEN1-225ENST00000560005 ZIC5Q96T25 663 aa26.75■■□□□ 1.87
PSEN1-225ENST00000560005 THUMPD2Q9BTF0 503 aaKnown RBP26.75■■□□□ 1.87
PSEN1-225ENST00000560005 PCDH10Q9P2E7 1040 aa26.75■■□□□ 1.87
PSEN1-225ENST00000560005 NOGQ13253 232 aa26.74■■□□□ 1.87
PSEN1-225ENST00000560005 TNIP1Q15025 636 aa26.74■■□□□ 1.87
PSEN1-225ENST00000560005 MPNDQ8N594 471 aa26.74■■□□□ 1.87
PSEN1-225ENST00000560005 ERBB4Q15303 1308 aa26.73■■□□□ 1.87
PSEN1-225ENST00000560005 SHTN1A0MZ66 631 aa26.73■■□□□ 1.87
PSEN1-225ENST00000560005 BBOX1O75936 387 aa26.73■■□□□ 1.87
PSEN1-225ENST00000560005 NEFMP07197 916 aa26.73■■□□□ 1.87
PSEN1-225ENST00000560005 SP8Q8IXZ3 490 aa26.73■■□□□ 1.87
PSEN1-225ENST00000560005 CNOT7Q9UIV1 285 aaKnown RBP26.73■■□□□ 1.87
PSEN1-225ENST00000560005 PDE4DIPQ5VU43 2346 aa26.73■■□□□ 1.87
PSEN1-225ENST00000560005 HUNKP57058 714 aa26.72■■□□□ 1.87
PSEN1-225ENST00000560005 USP48Q86UV5 1035 aa26.72■■□□□ 1.87
PSEN1-225ENST00000560005 DLK2Q6UY11 383 aa26.71■■□□□ 1.87
PSEN1-225ENST00000560005 YDJCA8MPS7 323 aa26.7■■□□□ 1.86
PSEN1-225ENST00000560005 H7C1D1 291 aa26.7■■□□□ 1.86
PSEN1-225ENST00000560005 LRP10Q7Z4F1 713 aa26.7■■□□□ 1.86
PSEN1-225ENST00000560005 LAMB2P55268 1798 aa26.7■■□□□ 1.86
PSEN1-225ENST00000560005 HCLS1P14317 486 aaPredicted RBP26.69■■□□□ 1.86
PSEN1-225ENST00000560005 MICALL2Q8IY33 904 aa26.69■■□□□ 1.86
PSEN1-225ENST00000560005 ZBTB12Q9Y330 459 aaPredicted RBP26.68■■□□□ 1.86
PSEN1-225ENST00000560005 ANKRD36CQ5JPF3 1778 aa26.67■■□□□ 1.86
PSEN1-225ENST00000560005 ANXA1P04083 346 aa26.67■■□□□ 1.86
PSEN1-225ENST00000560005 EIF2S2P20042 333 aaKnown RBP26.67■■□□□ 1.86
PSEN1-225ENST00000560005 PDIA6Q15084 440 aa26.67■■□□□ 1.86
PSEN1-225ENST00000560005 NFE2L2Q16236 605 aa26.67■■□□□ 1.86
PSEN1-225ENST00000560005 PROSER3Q2NL68 480 aa26.67■■□□□ 1.86
PSEN1-225ENST00000560005 DDX46Q7L014 1031 aaKnown RBP26.67■■□□□ 1.86
PSEN1-225ENST00000560005 HNRNPUQ00839 825 aaKnown RBP eCLIP26.66■■□□□ 1.86
PSEN1-225ENST00000560005 GRAPQ13588 217 aa26.66■■□□□ 1.86
PSEN1-225ENST00000560005 GRAPLQ8TC17 118 aaPredicted RBP26.66■■□□□ 1.86
PSEN1-225ENST00000560005 DUOX1Q9NRD9 1551 aa26.66■■□□□ 1.86
PSEN1-225ENST00000560005 WDR43Q15061 677 aaKnown RBP eCLIP26.65■■□□□ 1.86
PSEN1-225ENST00000560005 RGMBQ6NW40 437 aa26.65■■□□□ 1.86
PSEN1-225ENST00000560005 SAMD7Q7Z3H4 446 aa26.65■■□□□ 1.86
PSEN1-225ENST00000560005 PLEKHF1Q96S99 279 aa26.65■■□□□ 1.86
PSEN1-225ENST00000560005 FAM155AB1AL88 458 aaPredicted RBP26.64■■□□□ 1.86
PSEN1-225ENST00000560005 NLRP10Q86W26 655 aa26.64■■□□□ 1.86
PSEN1-225ENST00000560005 TSPYL4Q9UJ04 414 aa26.64■■□□□ 1.86
PSEN1-225ENST00000560005 TAF1P21675 1872 aa26.64■■□□□ 1.85
PSEN1-225ENST00000560005 TBC1D10BQ4KMP7 808 aaPredicted RBP26.63■■□□□ 1.85
PSEN1-225ENST00000560005 KRT26Q7Z3Y9 468 aa26.63■■□□□ 1.85
PSEN1-225ENST00000560005 GBA2Q9HCG7 927 aaPredicted RBP26.63■■□□□ 1.85
PSEN1-225ENST00000560005 EGFRP00533 1210 aa26.62■■□□□ 1.85
PSEN1-225ENST00000560005 SOX10P56693 466 aa26.62■■□□□ 1.85
PSEN1-225ENST00000560005 HSP90AB3PQ58FF7 597 aa26.62■■□□□ 1.85
PSEN1-225ENST00000560005 DPF2Q92785 391 aa26.62■■□□□ 1.85
PSEN1-225ENST00000560005 SAGE1Q9NXZ1 904 aa26.62■■□□□ 1.85
PSEN1-225ENST00000560005 TRMT112Q9UI30 125 aaKnown RBP26.62■■□□□ 1.85
PSEN1-225ENST00000560005 PSMD14O00487 310 aa26.61■■□□□ 1.85
PSEN1-225ENST00000560005 KIF23Q02241 960 aaPredicted RBP26.61■■□□□ 1.85
PSEN1-225ENST00000560005 DBNDD1Q9H9R9 158 aa26.61■■□□□ 1.85
PSEN1-225ENST00000560005 SH3TC1Q8TE82 1336 aa26.61■■□□□ 1.85
PSEN1-225ENST00000560005 ADM5C9JUS6 153 aa26.6■■□□□ 1.85
PSEN1-225ENST00000560005 AIMP1Q12904 312 aaKnown RBP26.6■■□□□ 1.85
PSEN1-225ENST00000560005 COPS6Q7L5N1 327 aa26.6■■□□□ 1.85
PSEN1-225ENST00000560005 C2orf69Q8N8R5 385 aa26.6■■□□□ 1.85
PSEN1-225ENST00000560005 LRRC37AA6NMS7 1700 aa26.59■■□□□ 1.85
PSEN1-225ENST00000560005 ZNF157P51786 506 aaPredicted RBP26.59■■□□□ 1.85
PSEN1-225ENST00000560005 WASHC4Q2M389 1173 aa26.59■■□□□ 1.85
PSEN1-225ENST00000560005 TMC4Q7Z404 712 aa26.59■■□□□ 1.85
PSEN1-225ENST00000560005 CCDC102AQ96A19 550 aa26.59■■□□□ 1.85
PSEN1-225ENST00000560005 ZNF428Q96B54 188 aa26.59■■□□□ 1.85
PSEN1-225ENST00000560005 MAPK8IP3Q9UPT6 1336 aa26.59■■□□□ 1.85
PSEN1-225ENST00000560005 POLR2AP24928 1970 aaKnown RBP26.58■■□□□ 1.85
PSEN1-225ENST00000560005 TRPA1O75762 1119 aa26.58■■□□□ 1.85
PSEN1-225ENST00000560005 TCIRG1Q13488 830 aa26.58■■□□□ 1.85
PSEN1-225ENST00000560005 RBM26Q5T8P6 1007 aaKnown RBP26.58■■□□□ 1.85
PSEN1-225ENST00000560005 XAGE3Q8WTP9 111 aa26.58■■□□□ 1.85
PSEN1-225ENST00000560005 NECTIN2Q92692 538 aa26.58■■□□□ 1.85
PSEN1-225ENST00000560005 RNF186Q9NXI6 227 aa26.58■■□□□ 1.85
PSEN1-225ENST00000560005 RIMBP2O15034 1052 aa26.57■■□□□ 1.84
PSEN1-225ENST00000560005 DCPSQ96C86 337 aaKnown RBP26.57■■□□□ 1.84
PSEN1-225ENST00000560005 NSFL1CQ9UNZ2 370 aaKnown RBP26.57■■□□□ 1.84
PSEN1-225ENST00000560005 ZBED9Q6R2W3 1325 aa26.56■■□□□ 1.84
PSEN1-225ENST00000560005 C6orf229H3BNL8 230 aa26.54■■□□□ 1.84
PSEN1-225ENST00000560005 RPS12P25398 132 aaKnown RBP26.54■■□□□ 1.84
PSEN1-225ENST00000560005 CELF1Q92879 486 aaKnown RBP26.54■■□□□ 1.84
PSEN1-225ENST00000560005 KCNQ5Q9NR82 932 aa26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms