RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 ZNF622Q969S3 477 aaKnown RBP eCLIP17.93■□□□□ 0.46
SMAD6-204ENST00000559931 KAZALD1Q96I82 304 aa17.93■□□□□ 0.46
SMAD6-204ENST00000559931 PDZRN3Q9UPQ7 1066 aa17.93■□□□□ 0.46
SMAD6-204ENST00000559931 A0A0G2JLW4 131 aa17.92■□□□□ 0.46
SMAD6-204ENST00000559931 CHRNA5P30532 468 aa17.92■□□□□ 0.46
SMAD6-204ENST00000559931 SF3B3Q15393 1217 aaKnown RBP17.92■□□□□ 0.46
SMAD6-204ENST00000559931 DDX46Q7L014 1031 aaKnown RBP17.92■□□□□ 0.46
SMAD6-204ENST00000559931 RBM17Q96I25 401 aaKnown RBP17.92■□□□□ 0.46
SMAD6-204ENST00000559931 ANKRD31Q8N7Z5 1873 aa17.92■□□□□ 0.46
SMAD6-204ENST00000559931 C10orf71Q711Q0 1435 aa17.91■□□□□ 0.46
SMAD6-204ENST00000559931 CSF1RP07333 972 aa17.91■□□□□ 0.46
SMAD6-204ENST00000559931 TGFB2P61812 414 aa17.91■□□□□ 0.46
SMAD6-204ENST00000559931 CCDC57Q2TAC2 916 aa17.91■□□□□ 0.46
SMAD6-204ENST00000559931 ANKRD44Q8N8A2 993 aa17.91■□□□□ 0.46
SMAD6-204ENST00000559931 LAMB2P55268 1798 aa17.91■□□□□ 0.46
SMAD6-204ENST00000559931 SRGNP10124 158 aa17.9■□□□□ 0.46
SMAD6-204ENST00000559931 NPR1P16066 1061 aa17.9■□□□□ 0.46
SMAD6-204ENST00000559931 DPEP1P16444 411 aa17.9■□□□□ 0.46
SMAD6-204ENST00000559931 IFIT5Q13325 482 aaKnown RBP17.9■□□□□ 0.46
SMAD6-204ENST00000559931 AAMPQ13685 434 aa17.9■□□□□ 0.46
SMAD6-204ENST00000559931 TAF7LQ5H9L4 462 aa17.9■□□□□ 0.46
SMAD6-204ENST00000559931 MASTLQ96GX5 879 aa17.9■□□□□ 0.46
SMAD6-204ENST00000559931 GREM2Q9H772 168 aa17.9■□□□□ 0.46
SMAD6-204ENST00000559931 WWC3Q9ULE0 1092 aa17.9■□□□□ 0.46
SMAD6-204ENST00000559931 RIC1Q4ADV7 1423 aa17.89■□□□□ 0.46
SMAD6-204ENST00000559931 ANKRD18BA2A2Z9 1011 aa17.89■□□□□ 0.45
SMAD6-204ENST00000559931 KLRG2A4D1S0 409 aaPredicted RBP17.89■□□□□ 0.45
SMAD6-204ENST00000559931 SRGAP3O43295 1099 aa17.89■□□□□ 0.45
SMAD6-204ENST00000559931 ATP8B2P98198 1209 aa17.89■□□□□ 0.45
SMAD6-204ENST00000559931 FAM161AQ3B820 660 aa17.89■□□□□ 0.45
SMAD6-204ENST00000559931 RABL6Q3YEC7 729 aaPredicted RBP17.89■□□□□ 0.45
SMAD6-204ENST00000559931 PELP1Q8IZL8 1130 aaKnown RBP17.89■□□□□ 0.45
SMAD6-204ENST00000559931 TNRC6CQ9HCJ0 1690 aaKnown RBP17.89■□□□□ 0.45
SMAD6-204ENST00000559931 ITGA6P23229 1130 aa17.88■□□□□ 0.45
SMAD6-204ENST00000559931 ALDH1B1P30837 517 aa17.88■□□□□ 0.45
SMAD6-204ENST00000559931 CRY2Q49AN0 593 aa17.88■□□□□ 0.45
SMAD6-204ENST00000559931 STYK1Q6J9G0 422 aa17.88■□□□□ 0.45
SMAD6-204ENST00000559931 SEC31BQ9NQW1 1179 aa17.88■□□□□ 0.45
SMAD6-204ENST00000559931 KIAA1551Q9HCM1 1747 aa17.87■□□□□ 0.45
SMAD6-204ENST00000559931 HOXA10P31260 410 aaPredicted RBP17.87■□□□□ 0.45
SMAD6-204ENST00000559931 CEP85Q6P2H3 762 aa17.87■□□□□ 0.45
SMAD6-204ENST00000559931 RPAP2Q8IXW5 612 aaPredicted RBP17.87■□□□□ 0.45
SMAD6-204ENST00000559931 CNKSR1Q969H4 720 aa17.87■□□□□ 0.45
SMAD6-204ENST00000559931 CRAMP1Q96RY5 1269 aa17.87■□□□□ 0.45
SMAD6-204ENST00000559931 CDC5LQ99459 802 aaKnown RBP17.87■□□□□ 0.45
SMAD6-204ENST00000559931 TAF1P21675 1872 aa17.86■□□□□ 0.45
SMAD6-204ENST00000559931 HMMRO75330 724 aa17.86■□□□□ 0.45
SMAD6-204ENST00000559931 IGHMBP2P38935 993 aaKnown RBP17.86■□□□□ 0.45
SMAD6-204ENST00000559931 RPS8P62241 208 aaKnown RBP17.86■□□□□ 0.45
SMAD6-204ENST00000559931 ANKRD18AQ8IVF6 992 aa17.86■□□□□ 0.45
SMAD6-204ENST00000559931 PIM2Q9P1W9 311 aa17.86■□□□□ 0.45
SMAD6-204ENST00000559931 PNMA6EA0A0J9YXQ4 647 aa17.85■□□□□ 0.45
SMAD6-204ENST00000559931 GRAPQ13588 217 aa17.85■□□□□ 0.45
SMAD6-204ENST00000559931 TTLL6Q8N841 843 aa17.85■□□□□ 0.45
SMAD6-204ENST00000559931 GRAPLQ8TC17 118 aaPredicted RBP17.85■□□□□ 0.45
SMAD6-204ENST00000559931 ZNF594Q96JF6 807 aaPredicted RBP17.85■□□□□ 0.45
SMAD6-204ENST00000559931 MPHOSPH8Q99549 860 aa17.85■□□□□ 0.45
SMAD6-204ENST00000559931 TMX4Q9H1E5 349 aaPredicted RBP17.85■□□□□ 0.45
SMAD6-204ENST00000559931 PCDHB15Q9Y5E8 787 aa17.85■□□□□ 0.45
SMAD6-204ENST00000559931 RTL9Q8NET4 1388 aa17.84■□□□□ 0.45
SMAD6-204ENST00000559931 BBOX1O75936 387 aa17.84■□□□□ 0.45
SMAD6-204ENST00000559931 MTX1Q13505 466 aa17.84■□□□□ 0.45
SMAD6-204ENST00000559931 GPR162Q16538 588 aa17.84■□□□□ 0.45
SMAD6-204ENST00000559931 CELF1Q92879 486 aaKnown RBP17.84■□□□□ 0.45
SMAD6-204ENST00000559931 ZNF219Q9P2Y4 722 aaPredicted RBP17.84■□□□□ 0.45
SMAD6-204ENST00000559931 DCAF8L1A6NGE4 600 aa17.83■□□□□ 0.44
SMAD6-204ENST00000559931 KCNA3P22001 575 aa17.83■□□□□ 0.44
SMAD6-204ENST00000559931 DALRD3Q5D0E6 543 aaKnown RBP17.83■□□□□ 0.44
SMAD6-204ENST00000559931 LDHAL6AQ6ZMR3 332 aa17.83■□□□□ 0.44
SMAD6-204ENST00000559931 KLHDC4Q8TBB5 520 aa17.83■□□□□ 0.44
SMAD6-204ENST00000559931 CNNM1Q9NRU3 951 aa17.83■□□□□ 0.44
SMAD6-204ENST00000559931 CACNA1SQ13698 1873 aa17.83■□□□□ 0.44
SMAD6-204ENST00000559931 COL11A2P13942 1736 aaPredicted RBP17.83■□□□□ 0.44
SMAD6-204ENST00000559931 BRCA1P38398 1863 aaKnown RBP17.82■□□□□ 0.44
SMAD6-204ENST00000559931 OS9Q13438 667 aaPredicted RBP17.82■□□□□ 0.44
SMAD6-204ENST00000559931 PRPF40BQ6NWY9 871 aaKnown RBP17.82■□□□□ 0.44
SMAD6-204ENST00000559931 SSH3Q8TE77 659 aa17.82■□□□□ 0.44
SMAD6-204ENST00000559931 SIL1Q9H173 461 aa17.82■□□□□ 0.44
SMAD6-204ENST00000559931 GOLGB1Q14789 3259 aaKnown RBP17.82■□□□□ 0.44
SMAD6-204ENST00000559931 PPEF1O14829 653 aaPredicted RBP17.81■□□□□ 0.44
SMAD6-204ENST00000559931 SURF6O75683 361 aaKnown RBP17.81■□□□□ 0.44
SMAD6-204ENST00000559931 RFX5P48382 616 aaPredicted RBP17.81■□□□□ 0.44
SMAD6-204ENST00000559931 G3BP1Q13283 466 aaKnown RBP eCLIP17.81■□□□□ 0.44
SMAD6-204ENST00000559931 POLA2Q14181 598 aa17.81■□□□□ 0.44
SMAD6-204ENST00000559931 SIRT2Q8IXJ6 389 aa17.81■□□□□ 0.44
SMAD6-204ENST00000559931 PA2G4Q9UQ80 394 aaKnown RBP17.81■□□□□ 0.44
SMAD6-204ENST00000559931 BCS1LQ9Y276 419 aa17.81■□□□□ 0.44
SMAD6-204ENST00000559931 SPEF2Q9C093 1822 aa17.81■□□□□ 0.44
SMAD6-204ENST00000559931 PTPN12Q05209 780 aaKnown RBP17.8■□□□□ 0.44
SMAD6-204ENST00000559931 TMC4Q7Z404 712 aa17.8■□□□□ 0.44
SMAD6-204ENST00000559931 RWDD1Q9H446 243 aaPredicted RBP17.8■□□□□ 0.44
SMAD6-204ENST00000559931 BSDC1Q9NW68 430 aaPredicted RBP17.8■□□□□ 0.44
SMAD6-204ENST00000559931 DLEC1Q9Y238 1755 aa17.8■□□□□ 0.44
SMAD6-204ENST00000559931 SLX4Q8IY92 1834 aa17.79■□□□□ 0.44
SMAD6-204ENST00000559931 YBX3P16989 372 aaKnown RBP eCLIP17.79■□□□□ 0.447e-7■■□□□ 14.4
SMAD6-204ENST00000559931 PUS3Q9BZE2 481 aaKnown RBP17.79■□□□□ 0.44
SMAD6-204ENST00000559931 COPRSQ9NQ92 184 aa17.79■□□□□ 0.44
SMAD6-204ENST00000559931 EYA2O00167 538 aa17.78■□□□□ 0.44
SMAD6-204ENST00000559931 C21orf2O43822 256 aa17.78■□□□□ 0.44
SMAD6-204ENST00000559931 SP8Q8IXZ3 490 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms