RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 ANKRD36CQ5JPF3 1778 aa11.46□□□□□ -0.57
HMG20A-209ENST00000559728 TNRC6CQ9HCJ0 1690 aaKnown RBP11.46□□□□□ -0.57
HMG20A-209ENST00000559728 A0A0G2JLW4 131 aa11.46□□□□□ -0.57
HMG20A-209ENST00000559728 SRGNP10124 158 aa11.46□□□□□ -0.57
HMG20A-209ENST00000559728 TGFB2P61812 414 aa11.46□□□□□ -0.57
HMG20A-209ENST00000559728 EPHA10Q5JZY3 1008 aa11.46□□□□□ -0.57
HMG20A-209ENST00000559728 KIF13BQ9NQT8 1826 aa11.46□□□□□ -0.58
HMG20A-209ENST00000559728 ANKRD31Q8N7Z5 1873 aa11.45□□□□□ -0.58
HMG20A-209ENST00000559728 GRM8O00222 908 aa11.45□□□□□ -0.58
HMG20A-209ENST00000559728 IRS4O14654 1257 aaPredicted RBP11.45□□□□□ -0.58
HMG20A-209ENST00000559728 CCT4P50991 539 aaKnown RBP11.45□□□□□ -0.58
HMG20A-209ENST00000559728 ST5P78524 1137 aa11.45□□□□□ -0.58
HMG20A-209ENST00000559728 FOXO4P98177 505 aa11.45□□□□□ -0.58
HMG20A-209ENST00000559728 SF3B3Q15393 1217 aaKnown RBP11.45□□□□□ -0.58
HMG20A-209ENST00000559728 UBE3BQ7Z3V4 1068 aa11.45□□□□□ -0.58
HMG20A-209ENST00000559728 SLC51AQ86UW1 340 aa11.45□□□□□ -0.58
HMG20A-209ENST00000559728 DZIP1LQ8IYY4 767 aaKnown RBP11.45□□□□□ -0.58
HMG20A-209ENST00000559728 PANK1Q8TE04 598 aa11.45□□□□□ -0.58
HMG20A-209ENST00000559728 PLA2G12BQ9BX93 195 aa11.45□□□□□ -0.58
HMG20A-209ENST00000559728 PPP1R1BQ9UD71 204 aaPredicted RBP11.45□□□□□ -0.58
HMG20A-209ENST00000559728 COL4A1P02462 1669 aa11.45□□□□□ -0.58
HMG20A-209ENST00000559728 CACNA1FO60840 1977 aa11.45□□□□□ -0.58
HMG20A-209ENST00000559728 HOXA10P31260 410 aaPredicted RBP11.44□□□□□ -0.58
HMG20A-209ENST00000559728 RRP1P56182 461 aaKnown RBP11.44□□□□□ -0.58
HMG20A-209ENST00000559728 C2CD5Q86YS7 1000 aa11.44□□□□□ -0.58
HMG20A-209ENST00000559728 SUCLG2Q96I99 432 aa11.44□□□□□ -0.58
HMG20A-209ENST00000559728 MEIS3Q99687 375 aa11.44□□□□□ -0.58
HMG20A-209ENST00000559728 GOLGB1Q14789 3259 aaKnown RBP11.44□□□□□ -0.58
HMG20A-209ENST00000559728 ZBTB7BO15156 539 aaPredicted RBP11.43□□□□□ -0.58
HMG20A-209ENST00000559728 PDE8AO60658 829 aa11.43□□□□□ -0.58
HMG20A-209ENST00000559728 CSF1RP07333 972 aa11.43□□□□□ -0.58
HMG20A-209ENST00000559728 GTF2E1P29083 439 aaPredicted RBP11.43□□□□□ -0.58
HMG20A-209ENST00000559728 PDE6BP35913 854 aa11.43□□□□□ -0.58
HMG20A-209ENST00000559728 ANKRD44Q8N8A2 993 aa11.43□□□□□ -0.58
HMG20A-209ENST00000559728 TTLL11Q8NHH1 800 aa11.43□□□□□ -0.58
HMG20A-209ENST00000559728 PDE3AQ14432 1141 aa11.42□□□□□ -0.58
HMG20A-209ENST00000559728 RABL6Q3YEC7 729 aaPredicted RBP11.42□□□□□ -0.58
HMG20A-209ENST00000559728 STYK1Q6J9G0 422 aa11.42□□□□□ -0.58
HMG20A-209ENST00000559728 C7orf43Q8WVR3 580 aa11.42□□□□□ -0.58
HMG20A-209ENST00000559728 NLRP3Q96P20 1036 aa11.42□□□□□ -0.58
HMG20A-209ENST00000559728 COL11A2P13942 1736 aaPredicted RBP11.42□□□□□ -0.58
HMG20A-209ENST00000559728 DDX60Q8IY21 1712 aaKnown RBP11.41□□□□□ -0.58
HMG20A-209ENST00000559728 H0YIN7 160 aa11.41□□□□□ -0.58
HMG20A-209ENST00000559728 NPR1P16066 1061 aa11.41□□□□□ -0.58
HMG20A-209ENST00000559728 YBX3P16989 372 aaKnown RBP eCLIP11.41□□□□□ -0.582e-6■■■□□ 18.1
HMG20A-209ENST00000559728 NUBP1P53384 320 aa11.41□□□□□ -0.58
HMG20A-209ENST00000559728 CTSWP56202 376 aa11.41□□□□□ -0.58
HMG20A-209ENST00000559728 RASEFQ8IZ41 740 aa11.41□□□□□ -0.58
HMG20A-209ENST00000559728 MASTLQ96GX5 879 aa11.41□□□□□ -0.58
HMG20A-209ENST00000559728 TSPYL2Q9H2G4 693 aaPredicted RBP11.41□□□□□ -0.58
HMG20A-209ENST00000559728 SEC31BQ9NQW1 1179 aa11.41□□□□□ -0.58
HMG20A-209ENST00000559728 C9orf78Q9NZ63 289 aaPredicted RBP11.41□□□□□ -0.58
HMG20A-209ENST00000559728 WWC3Q9ULE0 1092 aa11.41□□□□□ -0.58
HMG20A-209ENST00000559728 CIZ1Q9ULV3 898 aaPredicted RBP11.41□□□□□ -0.58
HMG20A-209ENST00000559728 PDZRN3Q9UPQ7 1066 aa11.41□□□□□ -0.58
HMG20A-209ENST00000559728 UTRNP46939 3433 aa11.41□□□□□ -0.58
HMG20A-209ENST00000559728 SNED1Q8TER0 1413 aa11.41□□□□□ -0.58
HMG20A-209ENST00000559728 HAX1O00165 279 aa11.4□□□□□ -0.58
HMG20A-209ENST00000559728 NPHP1O15259 732 aa11.4□□□□□ -0.58
HMG20A-209ENST00000559728 MVPQ14764 893 aaKnown RBP11.4□□□□□ -0.58
HMG20A-209ENST00000559728 DCAF8Q5TAQ9 597 aa11.4□□□□□ -0.58
HMG20A-209ENST00000559728 CELF1Q92879 486 aaKnown RBP11.4□□□□□ -0.58
HMG20A-209ENST00000559728 CCDC85AQ96PX6 553 aaPredicted RBP11.4□□□□□ -0.58
HMG20A-209ENST00000559728 CRAMP1Q96RY5 1269 aa11.4□□□□□ -0.58
HMG20A-209ENST00000559728 BICC1Q9H694 974 aaKnown RBP11.4□□□□□ -0.58
HMG20A-209ENST00000559728 GREM2Q9H772 168 aa11.4□□□□□ -0.58
HMG20A-209ENST00000559728 COG6Q9Y2V7 657 aa11.4□□□□□ -0.58
HMG20A-209ENST00000559728 SUPT16HQ9Y5B9 1047 aaKnown RBP11.4□□□□□ -0.58
HMG20A-209ENST00000559728 N4BP2Q86UW6 1770 aaPredicted RBP11.4□□□□□ -0.58
HMG20A-209ENST00000559728 RTL9Q8NET4 1388 aa11.4□□□□□ -0.59
HMG20A-209ENST00000559728 LMBR1LQ6UX01 489 aa11.39□□□□□ -0.59
HMG20A-209ENST00000559728 OLFM4Q6UX06 510 aa11.39□□□□□ -0.59
HMG20A-209ENST00000559728 FTSJ3Q8IY81 847 aaKnown RBP11.39□□□□□ -0.59
HMG20A-209ENST00000559728 PIM2Q9P1W9 311 aa11.39□□□□□ -0.59
HMG20A-209ENST00000559728 LRRFIP2Q9Y608 721 aaKnown RBP11.39□□□□□ -0.59
HMG20A-209ENST00000559728 RFX5P48382 616 aaPredicted RBP11.38□□□□□ -0.59
HMG20A-209ENST00000559728 FAM161AQ3B820 660 aa11.38□□□□□ -0.59
HMG20A-209ENST00000559728 PRPF40BQ6NWY9 871 aaKnown RBP11.38□□□□□ -0.59
HMG20A-209ENST00000559728 ITPRIPQ8IWB1 547 aa11.38□□□□□ -0.59
HMG20A-209ENST00000559728 TTLL6Q8N841 843 aa11.38□□□□□ -0.59
HMG20A-209ENST00000559728 ZNF622Q969S3 477 aaKnown RBP eCLIP11.38□□□□□ -0.59
HMG20A-209ENST00000559728 ZBTB40Q9NUA8 1239 aa11.38□□□□□ -0.59
HMG20A-209ENST00000559728 LAMB2P55268 1798 aa11.38□□□□□ -0.59
HMG20A-209ENST00000559728 GNAI3P08754 354 aa11.37□□□□□ -0.59
HMG20A-209ENST00000559728 UBTFL1P0CB47 393 aaPredicted RBP11.37□□□□□ -0.59
HMG20A-209ENST00000559728 MS4A1P11836 297 aa11.37□□□□□ -0.59
HMG20A-209ENST00000559728 CD44P16070 742 aaKnown RBP11.37□□□□□ -0.59
HMG20A-209ENST00000559728 GRAPQ13588 217 aa11.37□□□□□ -0.59
HMG20A-209ENST00000559728 CCDC152Q4G0S7 254 aa11.37□□□□□ -0.59
HMG20A-209ENST00000559728 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.37□□□□□ -0.59
HMG20A-209ENST00000559728 GRAPLQ8TC17 118 aaPredicted RBP11.37□□□□□ -0.59
HMG20A-209ENST00000559728 CNKSR1Q969H4 720 aa11.37□□□□□ -0.59
HMG20A-209ENST00000559728 RBM17Q96I25 401 aaKnown RBP11.37□□□□□ -0.59
HMG20A-209ENST00000559728 DLEC1Q9Y238 1755 aa11.36□□□□□ -0.59
HMG20A-209ENST00000559728 HSP90B1P14625 803 aaKnown RBP11.36□□□□□ -0.59
HMG20A-209ENST00000559728 ITGA6P23229 1130 aa11.36□□□□□ -0.59
HMG20A-209ENST00000559728 MTX1Q13505 466 aa11.36□□□□□ -0.59
HMG20A-209ENST00000559728 DALRD3Q5D0E6 543 aaKnown RBP11.36□□□□□ -0.59
HMG20A-209ENST00000559728 RPGRQ92834 1020 aaKnown RBP11.36□□□□□ -0.59
HMG20A-209ENST00000559728 FAM212AQ96EL1 285 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms