RNA–Protein interactions for RNA: ENST00000559598.6

CRNDE-207, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best)

Gene CRNDE, Length 696 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-207ENST00000559598 SLC35F4A4IF30 521 aa9.31□□□□□ -0.92
CRNDE-207ENST00000559598 RHOQP17081 205 aa9.31□□□□□ -0.92
CRNDE-207ENST00000559598 RFX1P22670 979 aa9.31□□□□□ -0.92
CRNDE-207ENST00000559598 IDI1Q13907 227 aa9.31□□□□□ -0.92
CRNDE-207ENST00000559598 CCDC155Q8N6L0 562 aa9.31□□□□□ -0.92
CRNDE-207ENST00000559598 NANOS1Q8WY41 292 aaKnown RBP9.31□□□□□ -0.92
CRNDE-207ENST00000559598 ZNF594Q96JF6 807 aaPredicted RBP9.31□□□□□ -0.92
CRNDE-207ENST00000559598 PIK3R4Q99570 1358 aa9.31□□□□□ -0.92
CRNDE-207ENST00000559598 NHSL1Q5SYE7 1610 aa9.31□□□□□ -0.92
CRNDE-207ENST00000559598 ZFYVE9O95405 1425 aa9.31□□□□□ -0.92
CRNDE-207ENST00000559598 SENP3-EIF4A1A0A087X0R7 540 aa9.3□□□□□ -0.92
CRNDE-207ENST00000559598 BACH1O14867 736 aa9.3□□□□□ -0.92
CRNDE-207ENST00000559598 GTF2E1P29083 439 aaPredicted RBP9.3□□□□□ -0.92
CRNDE-207ENST00000559598 TMEM214Q6NUQ4 689 aaKnown RBP9.3□□□□□ -0.92
CRNDE-207ENST00000559598 NBPF10Q6P3W6 841 aaKnown RBP9.3□□□□□ -0.92
CRNDE-207ENST00000559598 LARP1Q6PKG0 1096 aaKnown RBP9.3□□□□□ -0.92
CRNDE-207ENST00000559598 NBPF15Q8N660 670 aa9.3□□□□□ -0.92
CRNDE-207ENST00000559598 C1orf115Q9H7X2 142 aa9.3□□□□□ -0.92
CRNDE-207ENST00000559598 DKK1O94907 266 aa9.29□□□□□ -0.92
CRNDE-207ENST00000559598 PTK7Q13308 1070 aa9.29□□□□□ -0.92
CRNDE-207ENST00000559598 MTFR1Q15390 333 aa9.29□□□□□ -0.92
CRNDE-207ENST00000559598 CRTC2Q53ET0 693 aaPredicted RBP9.29□□□□□ -0.92
CRNDE-207ENST00000559598 WDR44Q5JSH3 913 aa9.29□□□□□ -0.92
CRNDE-207ENST00000559598 GNASQ5JWF2 1037 aa9.29□□□□□ -0.92
CRNDE-207ENST00000559598 TAS1R3Q7RTX0 852 aa9.29□□□□□ -0.92
CRNDE-207ENST00000559598 PPARGC1BQ86YN6 1023 aaKnown RBP9.29□□□□□ -0.92
CRNDE-207ENST00000559598 CCDC82Q8N4S0 544 aa9.29□□□□□ -0.92
CRNDE-207ENST00000559598 RGS12O14924 1447 aa9.29□□□□□ -0.92
CRNDE-207ENST00000559598 SETD5Q9C0A6 1442 aa9.29□□□□□ -0.92
CRNDE-207ENST00000559598 TMEM131LA2VDJ0 1609 aa9.28□□□□□ -0.92
CRNDE-207ENST00000559598 TRPM2O94759 1503 aa9.28□□□□□ -0.92
CRNDE-207ENST00000559598 ASXL1Q8IXJ9 1541 aa9.28□□□□□ -0.92
CRNDE-207ENST00000559598 A6NJY4 79 aa9.28□□□□□ -0.92
CRNDE-207ENST00000559598 FAM196BA6NMK8 535 aa9.28□□□□□ -0.92
CRNDE-207ENST00000559598 USP17L15C9J2P7 530 aa9.28□□□□□ -0.92
CRNDE-207ENST00000559598 USP17L10C9JJH3 530 aa9.28□□□□□ -0.92
CRNDE-207ENST00000559598 USP17L13C9JLJ4 530 aa9.28□□□□□ -0.92
CRNDE-207ENST00000559598 USP17L12C9JPN9 530 aa9.28□□□□□ -0.92
CRNDE-207ENST00000559598 USP17L11C9JVI0 530 aa9.28□□□□□ -0.92
CRNDE-207ENST00000559598 USP17L21D6R901 530 aa9.28□□□□□ -0.92
CRNDE-207ENST00000559598 USP17L18D6R9N7 530 aa9.28□□□□□ -0.92
CRNDE-207ENST00000559598 USP17L22D6RA61 530 aa9.28□□□□□ -0.92
CRNDE-207ENST00000559598 USP17L17D6RBQ6 530 aa9.28□□□□□ -0.92
CRNDE-207ENST00000559598 USP17L19D6RCP7 530 aa9.28□□□□□ -0.92
CRNDE-207ENST00000559598 USP17L20D6RJB6 530 aa9.28□□□□□ -0.92
CRNDE-207ENST00000559598 ATF3P18847 181 aa9.28□□□□□ -0.92
CRNDE-207ENST00000559598 USP17L24Q0WX57 530 aa9.28□□□□□ -0.92
CRNDE-207ENST00000559598 C19orf44Q9H6X5 657 aa9.28□□□□□ -0.92
CRNDE-207ENST00000559598 TBX22Q9Y458 520 aa9.28□□□□□ -0.92
CRNDE-207ENST00000559598 RBM19Q9Y4C8 960 aaKnown RBP9.28□□□□□ -0.92
CRNDE-207ENST00000559598 AFF2P51816 1311 aa9.28□□□□□ -0.92
CRNDE-207ENST00000559598 PTPN23Q9H3S7 1636 aa9.27□□□□□ -0.92
CRNDE-207ENST00000559598 ATAD2Q6PL18 1390 aa9.27□□□□□ -0.93
CRNDE-207ENST00000559598 PPP1R15AO75807 674 aaPredicted RBP9.27□□□□□ -0.93
CRNDE-207ENST00000559598 RBM6P78332 1123 aaKnown RBP9.27□□□□□ -0.93
CRNDE-207ENST00000559598 RHBDD1Q8TEB9 315 aa9.27□□□□□ -0.93
CRNDE-207ENST00000559598 RIMS2Q9UQ26 1411 aa9.27□□□□□ -0.93
CRNDE-207ENST00000559598 ANKRD30AQ9BXX3 1397 aa9.26□□□□□ -0.93
CRNDE-207ENST00000559598 ABCC5O15440 1437 aa9.26□□□□□ -0.93
CRNDE-207ENST00000559598 DAPK1P53355 1430 aa9.26□□□□□ -0.93
CRNDE-207ENST00000559598 VPS8Q8N3P4 1428 aa9.26□□□□□ -0.93
CRNDE-207ENST00000559598 SFI1A8K8P3 1242 aa9.26□□□□□ -0.93
CRNDE-207ENST00000559598 M0R2N6 131 aa9.26□□□□□ -0.93
CRNDE-207ENST00000559598 CDK2AP1O14519 115 aa9.26□□□□□ -0.93
CRNDE-207ENST00000559598 ITGA6P23229 1130 aa9.26□□□□□ -0.93
CRNDE-207ENST00000559598 EPHA4P54764 986 aa9.26□□□□□ -0.93
CRNDE-207ENST00000559598 C4orf17Q53FE4 359 aa9.26□□□□□ -0.93
CRNDE-207ENST00000559598 CDCA8Q53HL2 280 aa9.26□□□□□ -0.93
CRNDE-207ENST00000559598 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.26□□□□□ -0.93
CRNDE-207ENST00000559598 CNTNAP3BQ96NU0 1288 aa9.26□□□□□ -0.93
CRNDE-207ENST00000559598 CNTNAP3Q9BZ76 1288 aa9.26□□□□□ -0.93
CRNDE-207ENST00000559598 TIMMDC1Q9NPL8 285 aa9.26□□□□□ -0.93
CRNDE-207ENST00000559598 IQSEC3Q9UPP2 1182 aaPredicted RBP9.26□□□□□ -0.93
CRNDE-207ENST00000559598 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.25□□□□□ -0.93
CRNDE-207ENST00000559598 PHKA2P46019 1235 aa9.25□□□□□ -0.93
CRNDE-207ENST00000559598 SEC13P55735 322 aa9.25□□□□□ -0.93
CRNDE-207ENST00000559598 SRPK2P78362 688 aaKnown RBP9.25□□□□□ -0.93
CRNDE-207ENST00000559598 SV2AQ7L0J3 742 aa9.25□□□□□ -0.93
CRNDE-207ENST00000559598 ANKMY2Q8IV38 441 aa9.25□□□□□ -0.93
CRNDE-207ENST00000559598 GPR161Q8N6U8 529 aaKnown RBP9.25□□□□□ -0.93
CRNDE-207ENST00000559598 NGLY1Q96IV0 654 aa9.25□□□□□ -0.93
CRNDE-207ENST00000559598 COL25A1Q9BXS0 654 aaPredicted RBP9.25□□□□□ -0.93
CRNDE-207ENST00000559598 DYRK1BQ9Y463 629 aa9.25□□□□□ -0.93
CRNDE-207ENST00000559598 EP400Q96L91 3159 aa9.24□□□□□ -0.93
CRNDE-207ENST00000559598 ADAMTS13Q76LX8 1427 aa9.24□□□□□ -0.93
CRNDE-207ENST00000559598 BRINP3Q76B58 766 aa9.24□□□□□ -0.93
CRNDE-207ENST00000559598 TNS4Q8IZW8 715 aa9.24□□□□□ -0.93
CRNDE-207ENST00000559598 NIFKQ9BYG3 293 aaKnown RBP9.24□□□□□ -0.93
CRNDE-207ENST00000559598 RRP7BPQ9NSQ0 103 aa9.24□□□□□ -0.93
CRNDE-207ENST00000559598 SCHIP1Q9P0W5 487 aaPredicted RBP9.24□□□□□ -0.93
CRNDE-207ENST00000559598 USP3Q9Y6I4 520 aa9.24□□□□□ -0.93
CRNDE-207ENST00000559598 XRN1Q8IZH2 1706 aaKnown RBP9.24□□□□□ -0.93
CRNDE-207ENST00000559598 LAMC1P11047 1609 aa9.23□□□□□ -0.93
CRNDE-207ENST00000559598 FOXK2Q01167 660 aa9.23□□□□□ -0.93
CRNDE-207ENST00000559598 KRT76Q01546 638 aa9.23□□□□□ -0.93
CRNDE-207ENST00000559598 DPYDQ12882 1025 aa9.23□□□□□ -0.93
CRNDE-207ENST00000559598 ZNF295-AS1Q8N0V1 137 aa9.23□□□□□ -0.93
CRNDE-207ENST00000559598 TSEN2Q8NCE0 465 aaKnown RBP9.23□□□□□ -0.93
CRNDE-207ENST00000559598 LRRC59Q96AG4 307 aaKnown RBP9.23□□□□□ -0.93
CRNDE-207ENST00000559598 ARXQ96QS3 562 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms