RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 NOS3P29474 1203 aa6.56□□□□□ -1.36
CASC4-210ENST00000559550 IRAK1P51617 712 aa6.56□□□□□ -1.36
CASC4-210ENST00000559550 AFF1P51825 1210 aaKnown RBP6.56□□□□□ -1.36
CASC4-210ENST00000559550 KCNQ4P56696 695 aa6.56□□□□□ -1.36
CASC4-210ENST00000559550 PRR23CQ6ZRP0 262 aa6.56□□□□□ -1.36
CASC4-210ENST00000559550 MEGF10Q96KG7 1140 aa6.56□□□□□ -1.36
CASC4-210ENST00000559550 ACIN1Q9UKV3 1341 aaKnown RBP6.55□□□□□ -1.36
CASC4-210ENST00000559550 IREB2P48200 963 aaKnown RBP6.55□□□□□ -1.36
CASC4-210ENST00000559550 TEAD4Q15561 434 aa6.55□□□□□ -1.36
CASC4-210ENST00000559550 SCG3Q8WXD2 468 aaKnown RBP6.55□□□□□ -1.36
CASC4-210ENST00000559550 L3MBTL2Q969R5 705 aa6.55□□□□□ -1.36
CASC4-210ENST00000559550 JPH1Q9HDC5 661 aaPredicted RBP6.55□□□□□ -1.36
CASC4-210ENST00000559550 SLAIN2Q9P270 581 aa6.55□□□□□ -1.36
CASC4-210ENST00000559550 GPC6Q9Y625 555 aaPredicted RBP6.55□□□□□ -1.36
CASC4-210ENST00000559550 OAS3Q9Y6K5 1087 aaKnown RBP6.55□□□□□ -1.36
CASC4-210ENST00000559550 ATAD2Q6PL18 1390 aa6.55□□□□□ -1.36
CASC4-210ENST00000559550 CARNS1A5YM72 827 aa6.54□□□□□ -1.36
CASC4-210ENST00000559550 PPP1R12BO60237 982 aaPredicted RBP6.54□□□□□ -1.36
CASC4-210ENST00000559550 SSTR4P31391 388 aa6.54□□□□□ -1.36
CASC4-210ENST00000559550 NOS2P35228 1153 aa6.54□□□□□ -1.36
CASC4-210ENST00000559550 DMRTC2Q8IXT2 367 aaPredicted RBP6.54□□□□□ -1.36
CASC4-210ENST00000559550 NUDT8Q8WV74 236 aa6.54□□□□□ -1.36
CASC4-210ENST00000559550 SLC6A14Q9UN76 642 aa6.54□□□□□ -1.36
CASC4-210ENST00000559550 MED26O95402 600 aa6.53□□□□□ -1.36
CASC4-210ENST00000559550 WEE1P30291 646 aa6.53□□□□□ -1.36
CASC4-210ENST00000559550 NEUROD1Q13562 356 aa6.53□□□□□ -1.36
CASC4-210ENST00000559550 OCLNQ16625 522 aa6.53□□□□□ -1.36
CASC4-210ENST00000559550 SLC51AQ86UW1 340 aa6.53□□□□□ -1.36
CASC4-210ENST00000559550 PRIMPOLQ96LW4 560 aa6.53□□□□□ -1.36
CASC4-210ENST00000559550 ZNF232Q9UNY5 417 aa6.53□□□□□ -1.36
CASC4-210ENST00000559550 RNF114Q9Y508 228 aa6.53□□□□□ -1.36
CASC4-210ENST00000559550 SERTM1A2A2V5 107 aa6.52□□□□□ -1.37
CASC4-210ENST00000559550 TMEM88BA6NKF7 163 aa6.52□□□□□ -1.37
CASC4-210ENST00000559550 PRMT3O60678 531 aa6.52□□□□□ -1.37
CASC4-210ENST00000559550 PSMA6P60900 246 aaKnown RBP6.52□□□□□ -1.37
CASC4-210ENST00000559550 SWI5Q1ZZU3 235 aa6.52□□□□□ -1.37
CASC4-210ENST00000559550 POTEAQ6S8J7 498 aa6.52□□□□□ -1.37
CASC4-210ENST00000559550 CHMP7Q8WUX9 453 aaPredicted RBP6.52□□□□□ -1.37
CASC4-210ENST00000559550 BRD7Q9NPI1 651 aa6.52□□□□□ -1.37
CASC4-210ENST00000559550 NAGPAQ9UK23 515 aa6.52□□□□□ -1.37
CASC4-210ENST00000559550 KIAA1324LA8MWY0 1029 aaPredicted RBP6.51□□□□□ -1.37
CASC4-210ENST00000559550 FSTP19883 344 aa6.51□□□□□ -1.37
CASC4-210ENST00000559550 IGFBP4P22692 258 aa6.51□□□□□ -1.37
CASC4-210ENST00000559550 FBXO11Q86XK2 927 aa6.51□□□□□ -1.37
CASC4-210ENST00000559550 C2orf49Q9BVC5 232 aaPredicted RBP6.51□□□□□ -1.37
CASC4-210ENST00000559550 HCN4Q9Y3Q4 1203 aa6.51□□□□□ -1.37
CASC4-210ENST00000559550 HIRAP54198 1017 aaPredicted RBP6.5□□□□□ -1.37
CASC4-210ENST00000559550 TYRO3Q06418 890 aa6.5□□□□□ -1.37
CASC4-210ENST00000559550 FKBP5Q13451 457 aaPredicted RBP6.5□□□□□ -1.37
CASC4-210ENST00000559550 GRIK5Q16478 980 aa6.5□□□□□ -1.37
CASC4-210ENST00000559550 DZIP1LQ8IYY4 767 aaKnown RBP6.5□□□□□ -1.37
CASC4-210ENST00000559550 BHMTQ93088 406 aa6.5□□□□□ -1.37
CASC4-210ENST00000559550 UBE2OQ9C0C9 1292 aaKnown RBP6.5□□□□□ -1.37
CASC4-210ENST00000559550 KCNH4Q9UQ05 1017 aa6.5□□□□□ -1.37
CASC4-210ENST00000559550 GP2P55259 537 aaKnown RBP6.49□□□□□ -1.37
CASC4-210ENST00000559550 MSL1Q68DK7 614 aa6.49□□□□□ -1.37
CASC4-210ENST00000559550 PSAPL1Q6NUJ1 521 aa6.49□□□□□ -1.37
CASC4-210ENST00000559550 STAG2Q8N3U4 1231 aa6.49□□□□□ -1.37
CASC4-210ENST00000559550 DTWD1Q8N5C7 304 aa6.49□□□□□ -1.37
CASC4-210ENST00000559550 CLP1Q92989 425 aaKnown RBP6.49□□□□□ -1.37
CASC4-210ENST00000559550 NEUROD4Q9HD90 331 aa6.49□□□□□ -1.37
CASC4-210ENST00000559550 CAPN12Q6ZSI9 719 aa6.48□□□□□ -1.37
CASC4-210ENST00000559550 RETREG2Q8NC44 543 aa6.48□□□□□ -1.37
CASC4-210ENST00000559550 HSH2DQ96JZ2 352 aa6.48□□□□□ -1.37
CASC4-210ENST00000559550 CEP63Q96MT8 703 aa6.48□□□□□ -1.37
CASC4-210ENST00000559550 PHACTR1Q9C0D0 580 aa6.48□□□□□ -1.37
CASC4-210ENST00000559550 CXXC1Q9P0U4 656 aaPredicted RBP6.48□□□□□ -1.37
CASC4-210ENST00000559550 ADAMTS4O75173 837 aa6.47□□□□□ -1.37
CASC4-210ENST00000559550 SCNN1AP37088 669 aa6.47□□□□□ -1.37
CASC4-210ENST00000559550 JAG1P78504 1218 aa6.47□□□□□ -1.37
CASC4-210ENST00000559550 IGF2-ASQ6U949 168 aa6.47□□□□□ -1.37
CASC4-210ENST00000559550 ALDH16A1Q8IZ83 802 aa6.47□□□□□ -1.37
CASC4-210ENST00000559550 RHPN1Q8TCX5 695 aa6.47□□□□□ -1.37
CASC4-210ENST00000559550 NGLY1Q96IV0 654 aa6.47□□□□□ -1.37
CASC4-210ENST00000559550 CHMP3Q9Y3E7 222 aa6.47□□□□□ -1.37
CASC4-210ENST00000559550 FOXO3O43524 673 aa6.46□□□□□ -1.38
CASC4-210ENST00000559550 TBC1D8BQ0IIM8 1120 aa6.46□□□□□ -1.38
CASC4-210ENST00000559550 C1orf53Q5VUE5 145 aa6.46□□□□□ -1.38
CASC4-210ENST00000559550 ZNF280CQ8ND82 737 aa6.46□□□□□ -1.38
CASC4-210ENST00000559550 MKNK1Q9BUB5 465 aa6.46□□□□□ -1.38
CASC4-210ENST00000559550 QTRT2Q9H974 415 aaKnown RBP6.46□□□□□ -1.38
CASC4-210ENST00000559550 DNAJB12Q9NXW2 375 aaKnown RBP6.46□□□□□ -1.38
CASC4-210ENST00000559550 RGS9O75916 674 aaPredicted RBP6.45□□□□□ -1.38
CASC4-210ENST00000559550 ATP2B4P23634 1241 aa6.45□□□□□ -1.38
CASC4-210ENST00000559550 PHLDB3Q6NSJ2 640 aa6.45□□□□□ -1.38
CASC4-210ENST00000559550 DEAF1O75398 565 aaPredicted RBP6.44□□□□□ -1.38
CASC4-210ENST00000559550 PLAURQ03405 335 aa6.44□□□□□ -1.38
CASC4-210ENST00000559550 SUSD3Q96L08 255 aa6.44□□□□□ -1.38
CASC4-210ENST00000559550 LPIN3Q9BQK8 851 aa6.44□□□□□ -1.38
CASC4-210ENST00000559550 IGFLR1Q9H665 355 aa6.44□□□□□ -1.38
CASC4-210ENST00000559550 EFCC1Q9HA90 598 aa6.44□□□□□ -1.38
CASC4-210ENST00000559550 USTQ9Y2C2 406 aa6.44□□□□□ -1.38
CASC4-210ENST00000559550 DLL1O00548 723 aa6.43□□□□□ -1.38
CASC4-210ENST00000559550 TGFB1P01137 390 aa6.43□□□□□ -1.38
CASC4-210ENST00000559550 SPINK2P20155 84 aa6.43□□□□□ -1.38
CASC4-210ENST00000559550 SSFA2P28290 1259 aa6.43□□□□□ -1.38
CASC4-210ENST00000559550 RTN1Q16799 776 aa6.43□□□□□ -1.38
CASC4-210ENST00000559550 LCE4AQ5TA78 99 aa6.43□□□□□ -1.38
CASC4-210ENST00000559550 VTI1AQ96AJ9 217 aa6.43□□□□□ -1.38
CASC4-210ENST00000559550 GSX2Q9BZM3 304 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms