RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 C3orf67Q6ZVT6 689 aa15.49■□□□□ 0.07
TPM1-216ENST00000558910 RIC3Q7Z5B4 369 aa15.49■□□□□ 0.07
TPM1-216ENST00000558910 SLC51AQ86UW1 340 aa15.49■□□□□ 0.07
TPM1-216ENST00000558910 RPGRQ92834 1020 aaKnown RBP15.49■□□□□ 0.07
TPM1-216ENST00000558910 UTP14AQ9BVJ6 771 aaKnown RBP15.49■□□□□ 0.07
TPM1-216ENST00000558910 TRMT112Q9UI30 125 aaKnown RBP15.49■□□□□ 0.07
TPM1-216ENST00000558910 NUP98P52948 1817 aa15.49■□□□□ 0.07
TPM1-216ENST00000558910 STK25O00506 426 aa15.48■□□□□ 0.07
TPM1-216ENST00000558910 HOXB7P09629 217 aa15.48■□□□□ 0.07
TPM1-216ENST00000558910 NPR1P16066 1061 aa15.48■□□□□ 0.07
TPM1-216ENST00000558910 PRELPP51888 382 aa15.48■□□□□ 0.07
TPM1-216ENST00000558910 STYK1Q6J9G0 422 aa15.48■□□□□ 0.07
TPM1-216ENST00000558910 HYPKQ9NX55 129 aa15.48■□□□□ 0.07
TPM1-216ENST00000558910 NFKBIEO00221 500 aa15.47■□□□□ 0.07
TPM1-216ENST00000558910 TCIRG1Q13488 830 aa15.47■□□□□ 0.07
TPM1-216ENST00000558910 CACNA1SQ13698 1873 aa15.47■□□□□ 0.07
TPM1-216ENST00000558910 CCDC27Q2M243 656 aa15.47■□□□□ 0.07
TPM1-216ENST00000558910 TWISTNBQ3B726 338 aaPredicted RBP15.47■□□□□ 0.07
TPM1-216ENST00000558910 PARP10Q53GL7 1025 aa15.47■□□□□ 0.07
TPM1-216ENST00000558910 NLRP10Q86W26 655 aa15.47■□□□□ 0.07
TPM1-216ENST00000558910 JARID2Q92833 1246 aaPredicted RBP15.47■□□□□ 0.07
TPM1-216ENST00000558910 MYD88Q99836 296 aa15.47■□□□□ 0.07
TPM1-216ENST00000558910 PDZRN3Q9UPQ7 1066 aa15.47■□□□□ 0.07
TPM1-216ENST00000558910 FANCIQ9NVI1 1328 aa15.46■□□□□ 0.07
TPM1-216ENST00000558910 EXOSC9Q06265 439 aaKnown RBP15.46■□□□□ 0.07
TPM1-216ENST00000558910 HSP90AB3PQ58FF7 597 aa15.46■□□□□ 0.07
TPM1-216ENST00000558910 CCDC30Q5VVM6 783 aa15.46■□□□□ 0.07
TPM1-216ENST00000558910 PLBD2Q8NHP8 589 aa15.46■□□□□ 0.07
TPM1-216ENST00000558910 ARFGEF1Q9Y6D6 1849 aa15.45■□□□□ 0.06
TPM1-216ENST00000558910 TNRC6CQ9HCJ0 1690 aaKnown RBP15.45■□□□□ 0.06
TPM1-216ENST00000558910 LMNB1P20700 586 aa15.45■□□□□ 0.06
TPM1-216ENST00000558910 FAM89AQ96GI7 184 aa15.45■□□□□ 0.06
TPM1-216ENST00000558910 L3MBTL3Q96JM7 780 aaPredicted RBP15.45■□□□□ 0.06
TPM1-216ENST00000558910 NLRP3Q96P20 1036 aa15.45■□□□□ 0.06
TPM1-216ENST00000558910 STK31Q9BXU1 1019 aa15.45■□□□□ 0.06
TPM1-216ENST00000558910 NMRK2Q9NPI5 230 aa15.45■□□□□ 0.06
TPM1-216ENST00000558910 ADCY9O60503 1353 aa15.45■□□□□ 0.06
TPM1-216ENST00000558910 SLX4Q8IY92 1834 aa15.45■□□□□ 0.06
TPM1-216ENST00000558910 G2E3Q7L622 706 aa15.44■□□□□ 0.06
TPM1-216ENST00000558910 SLAIN1Q8ND83 568 aa15.44■□□□□ 0.06
TPM1-216ENST00000558910 TAOK3Q9H2K8 898 aa15.44■□□□□ 0.06
TPM1-216ENST00000558910 ALDH1B1P30837 517 aa15.43■□□□□ 0.06
TPM1-216ENST00000558910 C1QTNF8P60827 252 aa15.43■□□□□ 0.06
TPM1-216ENST00000558910 RBM17Q96I25 401 aaKnown RBP15.43■□□□□ 0.06
TPM1-216ENST00000558910 ZNF277Q9NRM2 450 aaPredicted RBP15.43■□□□□ 0.06
TPM1-216ENST00000558910 DLEC1Q9Y238 1755 aa15.43■□□□□ 0.06
TPM1-216ENST00000558910 CCDC93Q567U6 631 aa15.42■□□□□ 0.06
TPM1-216ENST00000558910 WDR63Q8IWG1 891 aa15.42■□□□□ 0.06
TPM1-216ENST00000558910 CCDC85AQ96PX6 553 aaPredicted RBP15.42■□□□□ 0.06
TPM1-216ENST00000558910 RRAGCQ9HB90 399 aa15.42■□□□□ 0.06
TPM1-216ENST00000558910 MAP3K2Q9Y2U5 619 aa15.42■□□□□ 0.06
TPM1-216ENST00000558910 IL16Q14005 1332 aa15.42■□□□□ 0.06
TPM1-216ENST00000558910 SH3TC1Q8TE82 1336 aa15.42■□□□□ 0.06
TPM1-216ENST00000558910 KLRG2A4D1S0 409 aaPredicted RBP15.41■□□□□ 0.06
TPM1-216ENST00000558910 PPEF1O14829 653 aaPredicted RBP15.41■□□□□ 0.06
TPM1-216ENST00000558910 ISCA1Q9BUE6 129 aa15.41■□□□□ 0.06
TPM1-216ENST00000558910 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.41■□□□□ 0.06
TPM1-216ENST00000558910 PI4KAP2A4QPH2 592 aa15.4■□□□□ 0.06
TPM1-216ENST00000558910 DDX58O95786 925 aaKnown RBP15.4■□□□□ 0.06
TPM1-216ENST00000558910 DIEXFQ68CQ4 756 aaKnown RBP15.4■□□□□ 0.06
TPM1-216ENST00000558910 PI4KAP1Q8N8J0 262 aa15.4■□□□□ 0.06
TPM1-216ENST00000558910 CRY2Q49AN0 593 aa15.39■□□□□ 0.05
TPM1-216ENST00000558910 SOGA3Q5TF21 947 aa15.39■□□□□ 0.05
TPM1-216ENST00000558910 C16orf71Q8IYS4 520 aaPredicted RBP15.39■□□□□ 0.05
TPM1-216ENST00000558910 C7orf43Q8WVR3 580 aa15.39■□□□□ 0.05
TPM1-216ENST00000558910 MYH16Q9H6N6 1097 aa15.39■□□□□ 0.05
TPM1-216ENST00000558910 ABCC4O15439 1325 aa15.39■□□□□ 0.05
TPM1-216ENST00000558910 IBTKQ9P2D0 1353 aaPredicted RBP15.38■□□□□ 0.05
TPM1-216ENST00000558910 IRS4O14654 1257 aaPredicted RBP15.38■□□□□ 0.05
TPM1-216ENST00000558910 KIF3CO14782 793 aa15.38■□□□□ 0.05
TPM1-216ENST00000558910 VAMP4O75379 141 aa15.38■□□□□ 0.05
TPM1-216ENST00000558910 FKBP5Q13451 457 aaPredicted RBP15.38■□□□□ 0.05
TPM1-216ENST00000558910 DDX46Q7L014 1031 aaKnown RBP15.38■□□□□ 0.05
TPM1-216ENST00000558910 MS4A4AQ96JQ5 239 aa15.38■□□□□ 0.05
TPM1-216ENST00000558910 TMX4Q9H1E5 349 aaPredicted RBP15.38■□□□□ 0.05
TPM1-216ENST00000558910 KDM2BQ8NHM5 1336 aa15.38■□□□□ 0.05
TPM1-216ENST00000558910 FKBP4Q02790 459 aaKnown RBP eCLIP15.37■□□□□ 0.05
TPM1-216ENST00000558910 FLIIQ13045 1269 aa15.37■□□□□ 0.05
TPM1-216ENST00000558910 CWF19L2Q2TBE0 894 aaKnown RBP15.37■□□□□ 0.05
TPM1-216ENST00000558910 SLC10A5Q5PT55 438 aa15.37■□□□□ 0.05
TPM1-216ENST00000558910 METTL22Q9BUU2 404 aaPredicted RBP15.37■□□□□ 0.05
TPM1-216ENST00000558910 CHMP4AQ9BY43 222 aa15.37■□□□□ 0.05
TPM1-216ENST00000558910 CWC25Q9NXE8 425 aaPredicted RBP15.37■□□□□ 0.05
TPM1-216ENST00000558910 BOLA1Q9Y3E2 137 aa15.37■□□□□ 0.05
TPM1-216ENST00000558910 ANKRD36CQ5JPF3 1778 aa15.36■□□□□ 0.05
TPM1-216ENST00000558910 SBF1O95248 1867 aa15.36■□□□□ 0.05
TPM1-216ENST00000558910 CCDC88AQ3V6T2 1871 aa15.36■□□□□ 0.05
TPM1-216ENST00000558910 HOXA10P31260 410 aaPredicted RBP15.36■□□□□ 0.05
TPM1-216ENST00000558910 KSR2Q6VAB6 950 aa15.36■□□□□ 0.05
TPM1-216ENST00000558910 RTKN2Q8IZC4 609 aa15.36■□□□□ 0.05
TPM1-216ENST00000558910 CRAMP1Q96RY5 1269 aa15.36■□□□□ 0.05
TPM1-216ENST00000558910 ARFGEF2Q9Y6D5 1785 aa15.35■□□□□ 0.05
TPM1-216ENST00000558910 DDNO94850 711 aaPredicted RBP15.35■□□□□ 0.05
TPM1-216ENST00000558910 NEXNQ0ZGT2 675 aa15.35■□□□□ 0.05
TPM1-216ENST00000558910 CDCA7LQ96GN5 454 aa15.35■□□□□ 0.05
TPM1-216ENST00000558910 GLTPD2A6NH11 291 aa15.34■□□□□ 0.05
TPM1-216ENST00000558910 F6X3S4 739 aa15.34■□□□□ 0.05
TPM1-216ENST00000558910 G3V3G9 751 aa15.34■□□□□ 0.05
TPM1-216ENST00000558910 IGKV5-2P06315 115 aa15.34■□□□□ 0.05
TPM1-216ENST00000558910 IARSP41252 1262 aaKnown RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms