RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 DDX60Q8IY21 1712 aaKnown RBP10.49□□□□□ -0.73
TRAF3-205ENST00000558700 LRRC37AA6NMS7 1700 aa10.48□□□□□ -0.73
TRAF3-205ENST00000558700 ADAMTSL1Q8N6G6 1762 aa10.48□□□□□ -0.73
TRAF3-205ENST00000558700 PPEF1O14829 653 aaPredicted RBP10.48□□□□□ -0.73
TRAF3-205ENST00000558700 DDNO94850 711 aaPredicted RBP10.48□□□□□ -0.73
TRAF3-205ENST00000558700 ANXA1P04083 346 aa10.48□□□□□ -0.73
TRAF3-205ENST00000558700 HOXA10P31260 410 aaPredicted RBP10.48□□□□□ -0.73
TRAF3-205ENST00000558700 IARSP41252 1262 aaKnown RBP10.48□□□□□ -0.73
TRAF3-205ENST00000558700 CALD1Q05682 793 aaKnown RBP10.48□□□□□ -0.73
TRAF3-205ENST00000558700 GRIPAP1Q4V328 841 aa10.48□□□□□ -0.73
TRAF3-205ENST00000558700 HDGFL1Q5TGJ6 251 aa10.48□□□□□ -0.73
TRAF3-205ENST00000558700 EFCAB3Q8N7B9 438 aa10.48□□□□□ -0.73
TRAF3-205ENST00000558700 RBM17Q96I25 401 aaKnown RBP10.48□□□□□ -0.73
TRAF3-205ENST00000558700 L3MBTL3Q96JM7 780 aaPredicted RBP10.48□□□□□ -0.73
TRAF3-205ENST00000558700 CRAMP1Q96RY5 1269 aa10.48□□□□□ -0.73
TRAF3-205ENST00000558700 PSMD1Q99460 953 aa10.48□□□□□ -0.73
TRAF3-205ENST00000558700 UTP14AQ9BVJ6 771 aaKnown RBP10.48□□□□□ -0.73
TRAF3-205ENST00000558700 DDX21Q9NR30 783 aaKnown RBP eCLIP10.48□□□□□ -0.73
TRAF3-205ENST00000558700 TESPA1A2RU30 521 aaPredicted RBP10.47□□□□□ -0.73
TRAF3-205ENST00000558700 PPP1R37O75864 691 aa10.47□□□□□ -0.73
TRAF3-205ENST00000558700 AIMP1Q12904 312 aaKnown RBP10.47□□□□□ -0.73
TRAF3-205ENST00000558700 OLFM4Q6UX06 510 aa10.47□□□□□ -0.73
TRAF3-205ENST00000558700 COPS6Q7L5N1 327 aa10.47□□□□□ -0.73
TRAF3-205ENST00000558700 XAGE3Q8WTP9 111 aa10.47□□□□□ -0.73
TRAF3-205ENST00000558700 JDP2Q8WYK2 163 aa10.47□□□□□ -0.73
TRAF3-205ENST00000558700 KLRG1Q96E93 195 aa10.47□□□□□ -0.73
TRAF3-205ENST00000558700 NLRP3Q96P20 1036 aa10.47□□□□□ -0.73
TRAF3-205ENST00000558700 TMX4Q9H1E5 349 aaPredicted RBP10.47□□□□□ -0.73
TRAF3-205ENST00000558700 CHPF2Q9P2E5 772 aa10.47□□□□□ -0.73
TRAF3-205ENST00000558700 ZNF541Q9H0D2 1346 aa10.47□□□□□ -0.73
TRAF3-205ENST00000558700 POTECB2RU33 542 aa10.46□□□□□ -0.73
TRAF3-205ENST00000558700 SEMA3EO15041 775 aa10.46□□□□□ -0.73
TRAF3-205ENST00000558700 HTRA3P83110 453 aa10.46□□□□□ -0.73
TRAF3-205ENST00000558700 KRT24Q2M2I5 525 aa10.46□□□□□ -0.73
TRAF3-205ENST00000558700 SYNE4Q8N205 404 aa10.46□□□□□ -0.73
TRAF3-205ENST00000558700 DNAJC5GQ8N7S2 189 aa10.46□□□□□ -0.73
TRAF3-205ENST00000558700 IFT57Q9NWB7 429 aa10.46□□□□□ -0.73
TRAF3-205ENST00000558700 DBF4Q9UBU7 674 aaPredicted RBP10.46□□□□□ -0.73
TRAF3-205ENST00000558700 COL4A5P29400 1685 aa10.46□□□□□ -0.74
TRAF3-205ENST00000558700 ABCC4O15439 1325 aa10.45□□□□□ -0.74
TRAF3-205ENST00000558700 SH3TC1Q8TE82 1336 aa10.45□□□□□ -0.74
TRAF3-205ENST00000558700 NLRP10Q86W26 655 aa10.45□□□□□ -0.74
TRAF3-205ENST00000558700 LDHDQ86WU2 507 aa10.45□□□□□ -0.74
TRAF3-205ENST00000558700 FBXO22Q8NEZ5 403 aa10.45□□□□□ -0.74
TRAF3-205ENST00000558700 PLBD2Q8NHP8 589 aa10.45□□□□□ -0.74
TRAF3-205ENST00000558700 FZD9O00144 591 aa10.44□□□□□ -0.74
TRAF3-205ENST00000558700 PRKAR2AP13861 404 aaKnown RBP10.44□□□□□ -0.74
TRAF3-205ENST00000558700 PDE4AP27815 886 aa10.44□□□□□ -0.74
TRAF3-205ENST00000558700 ZEB1P37275 1124 aaPredicted RBP10.44□□□□□ -0.74
TRAF3-205ENST00000558700 EIF6P56537 245 aaKnown RBP10.44□□□□□ -0.74
TRAF3-205ENST00000558700 GNAI1P63096 354 aa10.44□□□□□ -0.74
TRAF3-205ENST00000558700 TCIRG1Q13488 830 aa10.44□□□□□ -0.74
TRAF3-205ENST00000558700 SLC10A5Q5PT55 438 aa10.44□□□□□ -0.74
TRAF3-205ENST00000558700 C3orf67Q6ZVT6 689 aa10.44□□□□□ -0.74
TRAF3-205ENST00000558700 IFNL1Q8IU54 200 aa10.44□□□□□ -0.74
TRAF3-205ENST00000558700 GPC2Q8N158 579 aa10.44□□□□□ -0.74
TRAF3-205ENST00000558700 LARGE2Q8N3Y3 721 aa10.44□□□□□ -0.74
TRAF3-205ENST00000558700 JMYQ8N9B5 988 aa10.44□□□□□ -0.74
TRAF3-205ENST00000558700 TAF1DQ9H5J8 278 aaPredicted RBP10.44□□□□□ -0.74
TRAF3-205ENST00000558700 MBIPQ9NS73 344 aa10.44□□□□□ -0.74
TRAF3-205ENST00000558700 HYPKQ9NX55 129 aa10.44□□□□□ -0.74
TRAF3-205ENST00000558700 TRMT112Q9UI30 125 aaKnown RBP10.44□□□□□ -0.74
TRAF3-205ENST00000558700 HACL1Q9UJ83 578 aa10.44□□□□□ -0.74
TRAF3-205ENST00000558700 APAF1O14727 1248 aa10.43□□□□□ -0.74
TRAF3-205ENST00000558700 GOLGA2Q08379 1002 aa10.43□□□□□ -0.74
TRAF3-205ENST00000558700 DUSP27Q5VZP5 1158 aa10.43□□□□□ -0.74
TRAF3-205ENST00000558700 DDX46Q7L014 1031 aaKnown RBP10.43□□□□□ -0.74
TRAF3-205ENST00000558700 NIM1KQ8IY84 436 aa10.43□□□□□ -0.74
TRAF3-205ENST00000558700 SUPT20HQ8NEM7 779 aa10.43□□□□□ -0.74
TRAF3-205ENST00000558700 SLC24A3Q9HC58 644 aa10.43□□□□□ -0.74
TRAF3-205ENST00000558700 ATP6V0A2Q9Y487 856 aa10.43□□□□□ -0.74
TRAF3-205ENST00000558700 DUOX1Q9NRD9 1551 aa10.43□□□□□ -0.74
TRAF3-205ENST00000558700 LTBP1Q14766 1721 aa10.42□□□□□ -0.74
TRAF3-205ENST00000558700 TCERG1O14776 1098 aaKnown RBP10.42□□□□□ -0.74
TRAF3-205ENST00000558700 PPIP5K2O43314 1243 aa10.42□□□□□ -0.74
TRAF3-205ENST00000558700 ZNF853P0CG23 659 aa10.42□□□□□ -0.74
TRAF3-205ENST00000558700 POTEIP0CG38 1075 aa10.42□□□□□ -0.74
TRAF3-205ENST00000558700 POTEJP0CG39 1038 aa10.42□□□□□ -0.74
TRAF3-205ENST00000558700 LMOD1P29536 600 aaPredicted RBP10.42□□□□□ -0.74
TRAF3-205ENST00000558700 EPHX2P34913 555 aa10.42□□□□□ -0.74
TRAF3-205ENST00000558700 GRAPQ13588 217 aa10.42□□□□□ -0.74
TRAF3-205ENST00000558700 EAPPQ56P03 285 aaPredicted RBP10.42□□□□□ -0.74
TRAF3-205ENST00000558700 ANKRD13DQ6ZTN6 518 aa10.42□□□□□ -0.74
TRAF3-205ENST00000558700 TMC4Q7Z404 712 aa10.42□□□□□ -0.74
TRAF3-205ENST00000558700 PNMA8AQ86V59 439 aaPredicted RBP10.42□□□□□ -0.74
TRAF3-205ENST00000558700 GRAPLQ8TC17 118 aaPredicted RBP10.42□□□□□ -0.74
TRAF3-205ENST00000558700 LARP6Q9BRS8 491 aaKnown RBP10.42□□□□□ -0.74
TRAF3-205ENST00000558700 CHMP4AQ9BY43 222 aa10.42□□□□□ -0.74
TRAF3-205ENST00000558700 VPS33BQ9H267 617 aa10.42□□□□□ -0.74
TRAF3-205ENST00000558700 TAF1P21675 1872 aa10.42□□□□□ -0.74
TRAF3-205ENST00000558700 BBOX1O75936 387 aa10.41□□□□□ -0.74
TRAF3-205ENST00000558700 HCLS1P14317 486 aaPredicted RBP10.41□□□□□ -0.74
TRAF3-205ENST00000558700 IFFO2Q5TF58 517 aa10.41□□□□□ -0.74
TRAF3-205ENST00000558700 DPP8Q6V1X1 898 aaPredicted RBP10.41□□□□□ -0.74
TRAF3-205ENST00000558700 HOMEZQ8IX15 550 aa10.41□□□□□ -0.74
TRAF3-205ENST00000558700 ISCA1Q9BUE6 129 aa10.41□□□□□ -0.74
TRAF3-205ENST00000558700 GJA3Q9Y6H8 435 aa10.41□□□□□ -0.74
TRAF3-205ENST00000558700 AOC3Q16853 763 aa10.4□□□□□ -0.74
TRAF3-205ENST00000558700 SLC51AQ86UW1 340 aa10.4□□□□□ -0.74
TRAF3-205ENST00000558700 SP8Q8IXZ3 490 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms