RNA–Protein interactions for RNA: ENST00000558441.1

AC090877.2-201, humanhuman

BASIC

Gene AC090877.2, Length 1,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC090877.2-201ENST00000558441 CCDC85AQ96PX6 553 aaPredicted RBP29.25■■■□□ 2.27
AC090877.2-201ENST00000558441 ATP8B2P98198 1209 aa29.24■■■□□ 2.27
AC090877.2-201ENST00000558441 TNRC6CQ9HCJ0 1690 aaKnown RBP29.23■■■□□ 2.27
AC090877.2-201ENST00000558441 PDZRN3Q9UPQ7 1066 aa29.23■■■□□ 2.27
AC090877.2-201ENST00000558441 PCDHB15Q9Y5E8 787 aa29.23■■■□□ 2.27
AC090877.2-201ENST00000558441 ERICH6BQ5W0A0 696 aa29.23■■■□□ 2.27
AC090877.2-201ENST00000558441 GREM2Q9H772 168 aa29.23■■■□□ 2.27
AC090877.2-201ENST00000558441 SRGAP3O43295 1099 aa29.22■■■□□ 2.27
AC090877.2-201ENST00000558441 FAM161AQ3B820 660 aa29.22■■■□□ 2.27
AC090877.2-201ENST00000558441 CD2APQ9Y5K6 639 aa29.22■■■□□ 2.27
AC090877.2-201ENST00000558441 ANKRD31Q8N7Z5 1873 aa29.21■■■□□ 2.27
AC090877.2-201ENST00000558441 H0YIN7 160 aa29.21■■■□□ 2.27
AC090877.2-201ENST00000558441 RPGRQ92834 1020 aaKnown RBP29.21■■■□□ 2.27
AC090877.2-201ENST00000558441 PPP1R1BQ9UD71 204 aaPredicted RBP29.21■■■□□ 2.27
AC090877.2-201ENST00000558441 RTL9Q8NET4 1388 aa29.2■■■□□ 2.27
AC090877.2-201ENST00000558441 IFIT5Q13325 482 aaKnown RBP29.2■■■□□ 2.27
AC090877.2-201ENST00000558441 CCDC57Q2TAC2 916 aa29.2■■■□□ 2.27
AC090877.2-201ENST00000558441 C2CD5Q86YS7 1000 aa29.2■■■□□ 2.27
AC090877.2-201ENST00000558441 MYH3P11055 1940 aa29.2■■■□□ 2.27
AC090877.2-201ENST00000558441 PNMA6EA0A0J9YXQ4 647 aa29.2■■■□□ 2.26
AC090877.2-201ENST00000558441 SRGNP10124 158 aa29.2■■■□□ 2.26
AC090877.2-201ENST00000558441 ITGA6P23229 1130 aa29.2■■■□□ 2.26
AC090877.2-201ENST00000558441 DDX46Q7L014 1031 aaKnown RBP29.19■■■□□ 2.26
AC090877.2-201ENST00000558441 SIRT2Q8IXJ6 389 aa29.19■■■□□ 2.26
AC090877.2-201ENST00000558441 KLHL34Q8N239 644 aa29.19■■■□□ 2.26
AC090877.2-201ENST00000558441 ANKRD18BA2A2Z9 1011 aa29.18■■■□□ 2.26
AC090877.2-201ENST00000558441 HMMRO75330 724 aa29.18■■■□□ 2.26
AC090877.2-201ENST00000558441 NPR1P16066 1061 aa29.18■■■□□ 2.26
AC090877.2-201ENST00000558441 TGFB2P61812 414 aa29.18■■■□□ 2.26
AC090877.2-201ENST00000558441 SSH3Q8TE77 659 aa29.18■■■□□ 2.26
AC090877.2-201ENST00000558441 RBM17Q96I25 401 aaKnown RBP29.18■■■□□ 2.26
AC090877.2-201ENST00000558441 HOXA10P31260 410 aaPredicted RBP29.17■■■□□ 2.26
AC090877.2-201ENST00000558441 MASTLQ96GX5 879 aa29.17■■■□□ 2.26
AC090877.2-201ENST00000558441 SEC31BQ9NQW1 1179 aa29.17■■■□□ 2.26
AC090877.2-201ENST00000558441 CHRNA5P30532 468 aa29.17■■■□□ 2.26
AC090877.2-201ENST00000558441 POLA2Q14181 598 aa29.17■■■□□ 2.26
AC090877.2-201ENST00000558441 KIF13BQ9NQT8 1826 aa29.16■■■□□ 2.26
AC090877.2-201ENST00000558441 CDC5LQ99459 802 aaKnown RBP29.16■■■□□ 2.26
AC090877.2-201ENST00000558441 RFX5P48382 616 aaPredicted RBP29.15■■■□□ 2.26
AC090877.2-201ENST00000558441 CRAMP1Q96RY5 1269 aa29.15■■■□□ 2.26
AC090877.2-201ENST00000558441 TAF7LQ5H9L4 462 aa29.14■■■□□ 2.26
AC090877.2-201ENST00000558441 STYK1Q6J9G0 422 aa29.14■■■□□ 2.26
AC090877.2-201ENST00000558441 ZNF622Q969S3 477 aaKnown RBP eCLIP29.14■■■□□ 2.25
AC090877.2-201ENST00000558441 A0A0G2JLW4 131 aa29.13■■■□□ 2.25
AC090877.2-201ENST00000558441 DPEP1P16444 411 aa29.13■■■□□ 2.25
AC090877.2-201ENST00000558441 ALDH1B1P30837 517 aa29.12■■■□□ 2.25
AC090877.2-201ENST00000558441 PTPN12Q05209 780 aaKnown RBP29.12■■■□□ 2.25
AC090877.2-201ENST00000558441 GRAPQ13588 217 aa29.12■■■□□ 2.25
AC090877.2-201ENST00000558441 GRAPLQ8TC17 118 aaPredicted RBP29.12■■■□□ 2.25
AC090877.2-201ENST00000558441 HDAC1Q13547 482 aaPredicted RBP29.11■■■□□ 2.25
AC090877.2-201ENST00000558441 ANKRD18AQ8IVF6 992 aa29.11■■■□□ 2.25
AC090877.2-201ENST00000558441 KLHDC4Q8TBB5 520 aa29.11■■■□□ 2.25
AC090877.2-201ENST00000558441 CELF1Q92879 486 aaKnown RBP29.11■■■□□ 2.25
AC090877.2-201ENST00000558441 ZNF594Q96JF6 807 aaPredicted RBP29.11■■■□□ 2.25
AC090877.2-201ENST00000558441 FHDC1Q9C0D6 1143 aaPredicted RBP29.11■■■□□ 2.25
AC090877.2-201ENST00000558441 COPRSQ9NQ92 184 aa29.11■■■□□ 2.25
AC090877.2-201ENST00000558441 IGHMBP2P38935 993 aaKnown RBP29.11■■■□□ 2.25
AC090877.2-201ENST00000558441 RPS8P62241 208 aaKnown RBP29.11■■■□□ 2.25
AC090877.2-201ENST00000558441 RWDD1Q9H446 243 aaPredicted RBP29.11■■■□□ 2.25
AC090877.2-201ENST00000558441 COL11A2P13942 1736 aaPredicted RBP29.1■■■□□ 2.25
AC090877.2-201ENST00000558441 CNKSR1Q969H4 720 aa29.1■■■□□ 2.25
AC090877.2-201ENST00000558441 KCNA3P22001 575 aa29.09■■■□□ 2.25
AC090877.2-201ENST00000558441 PA2G4Q9UQ80 394 aaKnown RBP29.09■■■□□ 2.25
AC090877.2-201ENST00000558441 MPHOSPH8Q99549 860 aa29.08■■■□□ 2.25
AC090877.2-201ENST00000558441 BBOX1O75936 387 aa29.08■■■□□ 2.25
AC090877.2-201ENST00000558441 LDHAL6AQ6ZMR3 332 aa29.08■■■□□ 2.25
AC090877.2-201ENST00000558441 SURF6O75683 361 aaKnown RBP29.07■■■□□ 2.24
AC090877.2-201ENST00000558441 PPP4R2Q9NY27 417 aa29.07■■■□□ 2.24
AC090877.2-201ENST00000558441 NLGN2Q8NFZ4 835 aa29.06■■■□□ 2.24
AC090877.2-201ENST00000558441 SIL1Q9H173 461 aa29.06■■■□□ 2.24
AC090877.2-201ENST00000558441 BSDC1Q9NW68 430 aaPredicted RBP29.06■■■□□ 2.24
AC090877.2-201ENST00000558441 PIM2Q9P1W9 311 aa29.06■■■□□ 2.24
AC090877.2-201ENST00000558441 FBXO3Q9UK99 471 aa29.06■■■□□ 2.24
AC090877.2-201ENST00000558441 NOP58Q9Y2X3 529 aaKnown RBP29.06■■■□□ 2.24
AC090877.2-201ENST00000558441 LRP5O75197 1615 aa29.05■■■□□ 2.24
AC090877.2-201ENST00000558441 EYA2O00167 538 aa29.05■■■□□ 2.24
AC090877.2-201ENST00000558441 IGHDP01880 384 aa29.05■■■□□ 2.24
AC090877.2-201ENST00000558441 TTLL6Q8N841 843 aa29.05■■■□□ 2.24
AC090877.2-201ENST00000558441 SYT17Q9BSW7 474 aa29.05■■■□□ 2.24
AC090877.2-201ENST00000558441 CNNM1Q9NRU3 951 aa29.05■■■□□ 2.24
AC090877.2-201ENST00000558441 KIAA1551Q9HCM1 1747 aa29.04■■■□□ 2.24
AC090877.2-201ENST00000558441 G3BP1Q13283 466 aaKnown RBP eCLIP29.04■■■□□ 2.24
AC090877.2-201ENST00000558441 TMC4Q7Z404 712 aa29.04■■■□□ 2.24
AC090877.2-201ENST00000558441 CCDC136Q96JN2 1154 aa29.04■■■□□ 2.24
AC090877.2-201ENST00000558441 PUS3Q9BZE2 481 aaKnown RBP29.04■■■□□ 2.24
AC090877.2-201ENST00000558441 DCTPP1Q9H773 170 aa29.04■■■□□ 2.24
AC090877.2-201ENST00000558441 COL4A1P02462 1669 aa29.04■■■□□ 2.24
AC090877.2-201ENST00000558441 PPEF1O14829 653 aaPredicted RBP29.03■■■□□ 2.24
AC090877.2-201ENST00000558441 CIAO1O76071 339 aa29.03■■■□□ 2.24
AC090877.2-201ENST00000558441 PRPF40BQ6NWY9 871 aaKnown RBP29.03■■■□□ 2.24
AC090877.2-201ENST00000558441 LRRC24Q50LG9 513 aa29.03■■■□□ 2.24
AC090877.2-201ENST00000558441 HSP90AB4PQ58FF6 505 aa29.03■■■□□ 2.24
AC090877.2-201ENST00000558441 EXOC6BQ9Y2D4 811 aa29.03■■■□□ 2.24
AC090877.2-201ENST00000558441 TAF1P21675 1872 aa29.02■■■□□ 2.24
AC090877.2-201ENST00000558441 DLEC1Q9Y238 1755 aa29.02■■■□□ 2.24
AC090877.2-201ENST00000558441 OS9Q13438 667 aaPredicted RBP29.02■■■□□ 2.24
AC090877.2-201ENST00000558441 IL15P40933 162 aaPredicted RBP29.01■■■□□ 2.23
AC090877.2-201ENST00000558441 RIPOR2Q9Y4F9 1068 aa29.01■■■□□ 2.23
AC090877.2-201ENST00000558441 ATG9AQ7Z3C6 839 aa29■■■□□ 2.23
AC090877.2-201ENST00000558441 DALRD3Q5D0E6 543 aaKnown RBP29■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms