RNA–Protein interactions for RNA: ENST00000558357.5

INO80-205, Transcript of INO80 complex subunit, humanhuman

TSL 1 (best)

Gene INO80, Length 5,503 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80-205ENST00000558357 CWC25Q9NXE8 425 aaPredicted RBP12.94□□□□□ -0.34
INO80-205ENST00000558357 TIGD1Q96MW7 591 aa12.93□□□□□ -0.34
INO80-205ENST00000558357 PIK3R4Q99570 1358 aa12.93□□□□□ -0.34
INO80-205ENST00000558357 LRRC45Q96CN5 670 aa12.93□□□□□ -0.34
INO80-205ENST00000558357 TBC1D32Q96NH3 1257 aa12.93□□□□□ -0.34
INO80-205ENST00000558357 SSX2IPQ9Y2D8 614 aa12.93□□□□□ -0.34
INO80-205ENST00000558357 HAND2P61296 217 aa12.93□□□□□ -0.34
INO80-205ENST00000558357 NME9Q86XW9 330 aa12.93□□□□□ -0.34
INO80-205ENST00000558357 CCDC77Q9BR77 488 aa12.93□□□□□ -0.34
INO80-205ENST00000558357 STMN4Q9H169 189 aaPredicted RBP12.93□□□□□ -0.34
INO80-205ENST00000558357 TTC12Q9H892 705 aaPredicted RBP12.93□□□□□ -0.34
INO80-205ENST00000558357 OPA1O60313 960 aa12.93□□□□□ -0.34
INO80-205ENST00000558357 UQCRFS1P1P0C7P4 283 aa12.93□□□□□ -0.34
INO80-205ENST00000558357 GIMAP6Q6P9H5 292 aa12.93□□□□□ -0.34
INO80-205ENST00000558357 BICD1Q96G01 975 aa12.93□□□□□ -0.34
INO80-205ENST00000558357 TMEM87AQ8NBN3 555 aa12.93□□□□□ -0.34
INO80-205ENST00000558357 SKILP12757 684 aa12.92□□□□□ -0.34
INO80-205ENST00000558357 KRT23Q9C075 422 aa12.92□□□□□ -0.34
INO80-205ENST00000558357 TTC21BQ7Z4L5 1316 aa12.92□□□□□ -0.34
INO80-205ENST00000558357 CCDC6Q16204 474 aa12.92□□□□□ -0.34
INO80-205ENST00000558357 SKAP1Q86WV1 359 aa12.92□□□□□ -0.34
INO80-205ENST00000558357 SRRTQ9BXP5 876 aaKnown RBP12.92□□□□□ -0.34
INO80-205ENST00000558357 EMILIN1Q9Y6C2 1016 aa12.92□□□□□ -0.34
INO80-205ENST00000558357 KIF4AO95239 1232 aa12.92□□□□□ -0.34
INO80-205ENST00000558357 WTAPQ15007 396 aa12.92□□□□□ -0.34
INO80-205ENST00000558357 CRNKL1Q9BZJ0 848 aaKnown RBP12.92□□□□□ -0.34
INO80-205ENST00000558357 STAT6P42226 847 aa12.92□□□□□ -0.34
INO80-205ENST00000558357 TMTC2Q8N394 836 aa12.92□□□□□ -0.34
INO80-205ENST00000558357 TMX3Q96JJ7 454 aa12.92□□□□□ -0.34
INO80-205ENST00000558357 MPHOSPH6Q99547 160 aaKnown RBP12.92□□□□□ -0.34
INO80-205ENST00000558357 ZBTB3Q9H5J0 574 aa12.92□□□□□ -0.34
INO80-205ENST00000558357 C6orf229H3BNL8 230 aa12.91□□□□□ -0.34
INO80-205ENST00000558357 TACC1O75410 805 aa12.91□□□□□ -0.34
INO80-205ENST00000558357 TTLL12Q14166 644 aaPredicted RBP12.91□□□□□ -0.34
INO80-205ENST00000558357 PPP1R42Q7Z4L9 355 aa12.91□□□□□ -0.34
INO80-205ENST00000558357 WAPLQ7Z5K2 1190 aa12.91□□□□□ -0.34
INO80-205ENST00000558357 FAM200AQ8TCP9 573 aa12.91□□□□□ -0.34
INO80-205ENST00000558357 DDX23Q9BUQ8 820 aaKnown RBP12.91□□□□□ -0.34
INO80-205ENST00000558357 KLF18A0A0U1RQI7 1052 aa12.91□□□□□ -0.34
INO80-205ENST00000558357 GSTO1P78417 241 aa12.91□□□□□ -0.34
INO80-205ENST00000558357 TRAF1Q13077 416 aa12.91□□□□□ -0.34
INO80-205ENST00000558357 MRPS27Q92552 414 aaKnown RBP12.91□□□□□ -0.34
INO80-205ENST00000558357 SNRKQ9NRH2 765 aa12.91□□□□□ -0.34
INO80-205ENST00000558357 NSD2O96028 1365 aa12.91□□□□□ -0.34
INO80-205ENST00000558357 ATP2C2O75185 946 aa12.91□□□□□ -0.34
INO80-205ENST00000558357 KRT13P13646 458 aa12.91□□□□□ -0.34
INO80-205ENST00000558357 ANO6Q4KMQ2 910 aa12.91□□□□□ -0.34
INO80-205ENST00000558357 SYNCQ9H7C4 482 aa12.91□□□□□ -0.34
INO80-205ENST00000558357 DNAI1Q9UI46 699 aa12.91□□□□□ -0.34
INO80-205ENST00000558357 SUPT6HQ7KZ85 1726 aaKnown RBP12.91□□□□□ -0.34
INO80-205ENST00000558357 GPTP24298 496 aa12.91□□□□□ -0.34
INO80-205ENST00000558357 PIP4K2BP78356 416 aa12.91□□□□□ -0.34
INO80-205ENST00000558357 MXRA7P84157 204 aa12.91□□□□□ -0.34
INO80-205ENST00000558357 BRF1Q92994 677 aa12.91□□□□□ -0.34
INO80-205ENST00000558357 ZFYP08048 801 aaPredicted RBP12.9□□□□□ -0.34
INO80-205ENST00000558357 NOLC1Q14978 699 aaKnown RBP eCLIP12.9□□□□□ -0.34
INO80-205ENST00000558357 TTC14Q96N46 770 aa12.9□□□□□ -0.34
INO80-205ENST00000558357 MMRN2Q9H8L6 949 aa12.9□□□□□ -0.34
INO80-205ENST00000558357 ZBTB43O43298 467 aa12.9□□□□□ -0.34
INO80-205ENST00000558357 TRMT1LQ7Z2T5 733 aaKnown RBP12.9□□□□□ -0.34
INO80-205ENST00000558357 PSMD1Q99460 953 aa12.9□□□□□ -0.34
INO80-205ENST00000558357 CNNM2Q9H8M5 875 aa12.9□□□□□ -0.34
INO80-205ENST00000558357 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.9□□□□□ -0.34
INO80-205ENST00000558357 PSMA7O14818 248 aa12.9□□□□□ -0.34
INO80-205ENST00000558357 RAB11FIP4Q86YS3 637 aa12.9□□□□□ -0.34
INO80-205ENST00000558357 LMBR1Q8WVP7 490 aa12.9□□□□□ -0.34
INO80-205ENST00000558357 CFAP57Q96MR6 1250 aa12.9□□□□□ -0.34
INO80-205ENST00000558357 RAPGEF3O95398 923 aa12.9□□□□□ -0.34
INO80-205ENST00000558357 AFMP43652 599 aa12.9□□□□□ -0.34
INO80-205ENST00000558357 DDX46Q7L014 1031 aaKnown RBP12.9□□□□□ -0.34
INO80-205ENST00000558357 ANKS4BQ8N8V4 417 aa12.9□□□□□ -0.34
INO80-205ENST00000558357 ALG1Q9BT22 464 aa12.9□□□□□ -0.34
INO80-205ENST00000558357 ZHX1Q9UKY1 873 aaPredicted RBP12.9□□□□□ -0.34
INO80-205ENST00000558357 CAMSAP2Q08AD1 1489 aa12.9□□□□□ -0.34
INO80-205ENST00000558357 TIAM1Q13009 1591 aa12.9□□□□□ -0.35
INO80-205ENST00000558357 ATP2A1O14983 1001 aa12.9□□□□□ -0.35
INO80-205ENST00000558357 MSL1Q68DK7 614 aa12.9□□□□□ -0.35
INO80-205ENST00000558357 IL16Q14005 1332 aa12.9□□□□□ -0.35
INO80-205ENST00000558357 TUBB4BP68371 445 aa12.89□□□□□ -0.35
INO80-205ENST00000558357 KRT83P78385 493 aa12.89□□□□□ -0.35
INO80-205ENST00000558357 RNF216Q9NWF9 866 aaPredicted RBP12.89□□□□□ -0.35
INO80-205ENST00000558357 SERPINA10Q9UK55 444 aa12.89□□□□□ -0.35
INO80-205ENST00000558357 CTAGE9A4FU28 777 aa12.89□□□□□ -0.35
INO80-205ENST00000558357 PAIP2Q9BPZ3 127 aaKnown RBP12.89□□□□□ -0.35
INO80-205ENST00000558357 PHF8Q9UPP1 1060 aa12.89□□□□□ -0.35
INO80-205ENST00000558357 CCDC186Q7Z3E2 898 aa12.89□□□□□ -0.35
INO80-205ENST00000558357 UBE3BQ7Z3V4 1068 aa12.89□□□□□ -0.35
INO80-205ENST00000558357 ATRIPQ8WXE1 791 aa12.89□□□□□ -0.35
INO80-205ENST00000558357 RSPH14Q9UHP6 348 aa12.89□□□□□ -0.35
INO80-205ENST00000558357 GNAQP50148 359 aa12.88□□□□□ -0.35
INO80-205ENST00000558357 RAB3IL1Q8TBN0 382 aa12.88□□□□□ -0.35
INO80-205ENST00000558357 RHPN1Q8TCX5 695 aa12.88□□□□□ -0.35
INO80-205ENST00000558357 ESR2Q92731 530 aa12.88□□□□□ -0.35
INO80-205ENST00000558357 MCM6Q14566 821 aa12.88□□□□□ -0.35
INO80-205ENST00000558357 SMC6Q96SB8 1091 aa12.88□□□□□ -0.35
INO80-205ENST00000558357 EPRSP07814 1512 aaKnown RBP12.88□□□□□ -0.35
INO80-205ENST00000558357 NUCB1Q02818 461 aa12.88□□□□□ -0.35
INO80-205ENST00000558357 RTN1Q16799 776 aa12.88□□□□□ -0.35
INO80-205ENST00000558357 IFIT1BQ5T764 474 aaKnown RBP12.88□□□□□ -0.35
INO80-205ENST00000558357 CCDC129Q6ZRS4 1044 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms