RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 ZNF142P52746 1687 aaPredicted RBP6.47□□□□□ -1.37
GABPB1-207ENST00000558335 SYCE3A1L190 88 aa6.47□□□□□ -1.37
GABPB1-207ENST00000558335 PRKAR2AP13861 404 aaKnown RBP6.47□□□□□ -1.37
GABPB1-207ENST00000558335 FBLN1P23142 703 aa6.47□□□□□ -1.37
GABPB1-207ENST00000558335 GUCY2CP25092 1073 aa6.47□□□□□ -1.37
GABPB1-207ENST00000558335 TDO2P48775 406 aa6.47□□□□□ -1.37
GABPB1-207ENST00000558335 PRIM1P49642 420 aaKnown RBP6.47□□□□□ -1.37
GABPB1-207ENST00000558335 SYCP1Q15431 976 aa6.47□□□□□ -1.37
GABPB1-207ENST00000558335 ICE2Q659A1 982 aa6.47□□□□□ -1.37
GABPB1-207ENST00000558335 LARP1Q6PKG0 1096 aaKnown RBP6.47□□□□□ -1.37
GABPB1-207ENST00000558335 KSR2Q6VAB6 950 aa6.47□□□□□ -1.37
GABPB1-207ENST00000558335 PPP1R42Q7Z4L9 355 aa6.47□□□□□ -1.37
GABPB1-207ENST00000558335 LINS1Q8NG48 757 aa6.47□□□□□ -1.37
GABPB1-207ENST00000558335 GPT2Q8TD30 523 aa6.47□□□□□ -1.37
GABPB1-207ENST00000558335 SNRKQ9NRH2 765 aa6.47□□□□□ -1.37
GABPB1-207ENST00000558335 PDRG1Q9NUG6 133 aa6.47□□□□□ -1.37
GABPB1-207ENST00000558335 PHF8Q9UPP1 1060 aa6.47□□□□□ -1.37
GABPB1-207ENST00000558335 R3HCC1Q9Y3T6 440 aaKnown RBP6.47□□□□□ -1.37
GABPB1-207ENST00000558335 MARF1Q9Y4F3 1742 aaKnown RBP6.47□□□□□ -1.37
GABPB1-207ENST00000558335 COL15A1P39059 1388 aa6.46□□□□□ -1.37
GABPB1-207ENST00000558335 CAMTA1Q9Y6Y1 1673 aa6.46□□□□□ -1.37
GABPB1-207ENST00000558335 BTBD11A6QL63 1104 aa6.46□□□□□ -1.38
GABPB1-207ENST00000558335 F6X3S4 739 aa6.46□□□□□ -1.38
GABPB1-207ENST00000558335 CTAGE5O15320 804 aa6.46□□□□□ -1.38
GABPB1-207ENST00000558335 NEMFO60524 1076 aa6.46□□□□□ -1.38
GABPB1-207ENST00000558335 F13A1P00488 732 aa6.46□□□□□ -1.38
GABPB1-207ENST00000558335 EIF4A1P60842 406 aaKnown RBP6.46□□□□□ -1.38
GABPB1-207ENST00000558335 NWD1Q149M9 1564 aa6.46□□□□□ -1.38
GABPB1-207ENST00000558335 TSGA10IPQ3SY00 556 aa6.46□□□□□ -1.38
GABPB1-207ENST00000558335 BEND3Q5T5X7 828 aa6.46□□□□□ -1.38
GABPB1-207ENST00000558335 RUFY3Q7L099 469 aa6.46□□□□□ -1.38
GABPB1-207ENST00000558335 G2E3Q7L622 706 aa6.46□□□□□ -1.38
GABPB1-207ENST00000558335 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.46□□□□□ -1.38
GABPB1-207ENST00000558335 ZGPATQ8N5A5 531 aaKnown RBP6.46□□□□□ -1.38
GABPB1-207ENST00000558335 OTUD7AQ8TE49 926 aaPredicted RBP6.46□□□□□ -1.38
GABPB1-207ENST00000558335 TRIM34Q9BYJ4 488 aa6.46□□□□□ -1.38
GABPB1-207ENST00000558335 RBSNQ9H1K0 784 aa6.46□□□□□ -1.38
GABPB1-207ENST00000558335 ZSCAN16Q9H4T2 348 aaPredicted RBP6.46□□□□□ -1.38
GABPB1-207ENST00000558335 ZSWIM6Q9HCJ5 1215 aa6.46□□□□□ -1.38
GABPB1-207ENST00000558335 DDX19AQ9NUU7 478 aaKnown RBP6.46□□□□□ -1.38
GABPB1-207ENST00000558335 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.46□□□□□ -1.38
GABPB1-207ENST00000558335 TMEM63CQ9P1W3 806 aa6.46□□□□□ -1.38
GABPB1-207ENST00000558335 CFAP45Q9UL16 551 aa6.46□□□□□ -1.38
GABPB1-207ENST00000558335 ZDHHC9Q9Y397 364 aa6.46□□□□□ -1.38
GABPB1-207ENST00000558335 NUB1Q9Y5A7 615 aa6.46□□□□□ -1.38
GABPB1-207ENST00000558335 SNX14Q9Y5W7 946 aa6.46□□□□□ -1.38
GABPB1-207ENST00000558335 UTYO14607 1347 aa6.46□□□□□ -1.38
GABPB1-207ENST00000558335 SLIT3O75094 1523 aa6.45□□□□□ -1.38
GABPB1-207ENST00000558335 NFAT5O94916 1531 aa6.45□□□□□ -1.38
GABPB1-207ENST00000558335 LOC102724159A0A0B4J2E5 919 aa6.45□□□□□ -1.38
GABPB1-207ENST00000558335 PNMA6EA0A0J9YXQ4 647 aa6.45□□□□□ -1.38
GABPB1-207ENST00000558335 CCDC196A0A1B0GTZ2 297 aa6.45□□□□□ -1.38
GABPB1-207ENST00000558335 TUBB4AP04350 444 aa6.45□□□□□ -1.38
GABPB1-207ENST00000558335 LTKP29376 864 aa6.45□□□□□ -1.38
GABPB1-207ENST00000558335 EVX2Q03828 476 aa6.45□□□□□ -1.38
GABPB1-207ENST00000558335 PSME1Q06323 249 aa6.45□□□□□ -1.38
GABPB1-207ENST00000558335 SEMA3FQ13275 785 aa6.45□□□□□ -1.38
GABPB1-207ENST00000558335 MTA1Q13330 715 aa6.45□□□□□ -1.38
GABPB1-207ENST00000558335 PWP2Q15269 919 aaKnown RBP6.45□□□□□ -1.38
GABPB1-207ENST00000558335 NOM1Q5C9Z4 860 aaKnown RBP6.45□□□□□ -1.38
GABPB1-207ENST00000558335 USP48Q86UV5 1035 aa6.45□□□□□ -1.38
GABPB1-207ENST00000558335 ANKLE2Q86XL3 938 aa6.45□□□□□ -1.38
GABPB1-207ENST00000558335 EXOC8Q8IYI6 725 aa6.45□□□□□ -1.38
GABPB1-207ENST00000558335 IL17REQ8NFR9 667 aa6.45□□□□□ -1.38
GABPB1-207ENST00000558335 PI4K2BQ8TCG2 481 aa6.45□□□□□ -1.38
GABPB1-207ENST00000558335 ZNF526Q8TF50 670 aaPredicted RBP6.45□□□□□ -1.38
GABPB1-207ENST00000558335 TTC14Q96N46 770 aa6.45□□□□□ -1.38
GABPB1-207ENST00000558335 LLPHQ9BRT6 129 aaKnown RBP6.45□□□□□ -1.38
GABPB1-207ENST00000558335 LSG1Q9H089 658 aaKnown RBP6.45□□□□□ -1.38
GABPB1-207ENST00000558335 DDX21Q9NR30 783 aaKnown RBP eCLIP6.45□□□□□ -1.38
GABPB1-207ENST00000558335 ADAMTS7Q9UKP4 1686 aa6.45□□□□□ -1.38
GABPB1-207ENST00000558335 ERBB4Q15303 1308 aa6.45□□□□□ -1.38
GABPB1-207ENST00000558335 NPHP3Q7Z494 1330 aa6.45□□□□□ -1.38
GABPB1-207ENST00000558335 RPAP1Q9BWH6 1393 aaPredicted RBP6.44□□□□□ -1.38
GABPB1-207ENST00000558335 SIPA1L3O60292 1781 aaPredicted RBP6.44□□□□□ -1.38
GABPB1-207ENST00000558335 MST1RQ04912 1400 aa6.44□□□□□ -1.38
GABPB1-207ENST00000558335 SPEF2Q9C093 1822 aa6.44□□□□□ -1.38
GABPB1-207ENST00000558335 PI4KAP2A4QPH2 592 aa6.44□□□□□ -1.38
GABPB1-207ENST00000558335 KDM4AO75164 1064 aa6.44□□□□□ -1.38
GABPB1-207ENST00000558335 GIGYF1O75420 1035 aaPredicted RBP6.44□□□□□ -1.38
GABPB1-207ENST00000558335 EIF3JO75822 258 aaKnown RBP6.44□□□□□ -1.38
GABPB1-207ENST00000558335 IPO7O95373 1038 aaKnown RBP6.44□□□□□ -1.38
GABPB1-207ENST00000558335 CASTP20810 708 aaKnown RBP6.44□□□□□ -1.38
GABPB1-207ENST00000558335 SYT1P21579 422 aa6.44□□□□□ -1.38
GABPB1-207ENST00000558335 MAP3K11Q16584 847 aa6.44□□□□□ -1.38
GABPB1-207ENST00000558335 KRT24Q2M2I5 525 aa6.44□□□□□ -1.38
GABPB1-207ENST00000558335 CCDC96Q2M329 555 aa6.44□□□□□ -1.38
GABPB1-207ENST00000558335 ZNF530Q6P9A1 599 aaPredicted RBP6.44□□□□□ -1.38
GABPB1-207ENST00000558335 BLOC1S2Q6QNY1 142 aa6.44□□□□□ -1.38
GABPB1-207ENST00000558335 ANKRD23Q86SG2 305 aa6.44□□□□□ -1.38
GABPB1-207ENST00000558335 PI4KAP1Q8N8J0 262 aa6.44□□□□□ -1.38
GABPB1-207ENST00000558335 PIBF1Q8WXW3 757 aa6.44□□□□□ -1.38
GABPB1-207ENST00000558335 TSPAN18Q96SJ8 248 aa6.44□□□□□ -1.38
GABPB1-207ENST00000558335 RASSF4Q9H2L5 321 aa6.44□□□□□ -1.38
GABPB1-207ENST00000558335 DEF6Q9H4E7 631 aa6.44□□□□□ -1.38
GABPB1-207ENST00000558335 SUDS3Q9H7L9 328 aaPredicted RBP6.44□□□□□ -1.38
GABPB1-207ENST00000558335 ANAPC4Q9UJX5 808 aa6.44□□□□□ -1.38
GABPB1-207ENST00000558335 PAXBP1Q9Y5B6 917 aa6.44□□□□□ -1.38
GABPB1-207ENST00000558335 NCKAP5LQ9HCH0 1330 aa6.44□□□□□ -1.38
GABPB1-207ENST00000558335 KLHL33A6NCF5 533 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms