RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 C2CD2LO14523 706 aa10.34□□□□□ -0.75
RTF1-204ENST00000558117 ARAFP10398 606 aa10.34□□□□□ -0.75
RTF1-204ENST00000558117 BCRP11274 1271 aa10.34□□□□□ -0.75
RTF1-204ENST00000558117 SFSWAPQ12872 951 aaKnown RBP10.34□□□□□ -0.75
RTF1-204ENST00000558117 NEUROD1Q13562 356 aa10.34□□□□□ -0.75
RTF1-204ENST00000558117 KCNH4Q9UQ05 1017 aa10.34□□□□□ -0.75
RTF1-204ENST00000558117 BCS1LQ9Y276 419 aa10.34□□□□□ -0.75
RTF1-204ENST00000558117 MADDQ8WXG6 1647 aa10.33□□□□□ -0.76
RTF1-204ENST00000558117 B4GALNT3Q6L9W6 998 aa10.33□□□□□ -0.76
RTF1-204ENST00000558117 HCN2Q9UL51 889 aa10.33□□□□□ -0.76
RTF1-204ENST00000558117 IQSEC2Q5JU85 1478 aa10.33□□□□□ -0.76
RTF1-204ENST00000558117 IDH3AP50213 366 aa10.32□□□□□ -0.76
RTF1-204ENST00000558117 PDE4CQ08493 712 aa10.32□□□□□ -0.76
RTF1-204ENST00000558117 IFT43Q96FT9 208 aa10.32□□□□□ -0.76
RTF1-204ENST00000558117 AVENQ9NQS1 362 aaPredicted RBP10.32□□□□□ -0.76
RTF1-204ENST00000558117 RUSC2Q8N2Y8 1516 aa10.32□□□□□ -0.76
RTF1-204ENST00000558117 PTPRGP23470 1445 aa10.32□□□□□ -0.76
RTF1-204ENST00000558117 YEATS2Q9ULM3 1422 aa10.32□□□□□ -0.76
RTF1-204ENST00000558117 BRD2P25440 801 aaKnown RBP10.31□□□□□ -0.76
RTF1-204ENST00000558117 ADH6P28332 368 aa10.31□□□□□ -0.76
RTF1-204ENST00000558117 ARSDP51689 593 aa10.31□□□□□ -0.76
RTF1-204ENST00000558117 KCNQ4P56696 695 aa10.31□□□□□ -0.76
RTF1-204ENST00000558117 SPEM2Q0P670 501 aa10.31□□□□□ -0.76
RTF1-204ENST00000558117 SLCO4C1Q6ZQN7 724 aa10.31□□□□□ -0.76
RTF1-204ENST00000558117 NEDD1Q8NHV4 660 aa10.31□□□□□ -0.76
RTF1-204ENST00000558117 GGA1Q9UJY5 639 aa10.31□□□□□ -0.76
RTF1-204ENST00000558117 MTMR7Q9Y216 660 aa10.31□□□□□ -0.76
RTF1-204ENST00000558117 NEURL1BA8MQ27 555 aa10.3□□□□□ -0.76
RTF1-204ENST00000558117 MICAL2O94851 1124 aa10.3□□□□□ -0.76
RTF1-204ENST00000558117 ZNF468Q5VIY5 522 aaPredicted RBP10.3□□□□□ -0.76
RTF1-204ENST00000558117 LRRC4BQ9NT99 713 aa10.3□□□□□ -0.76
RTF1-204ENST00000558117 DNMT3AQ9Y6K1 912 aaPredicted RBP10.3□□□□□ -0.76
RTF1-204ENST00000558117 BCORL1Q5H9F3 1711 aa10.3□□□□□ -0.76
RTF1-204ENST00000558117 LTBP4Q8N2S1 1624 aa10.29□□□□□ -0.76
RTF1-204ENST00000558117 OIP5O43482 229 aa10.29□□□□□ -0.76
RTF1-204ENST00000558117 FAM26DQ5JW98 314 aa10.29□□□□□ -0.76
RTF1-204ENST00000558117 TREML1Q86YW5 311 aa10.29□□□□□ -0.76
RTF1-204ENST00000558117 GALNT6Q8NCL4 622 aa10.29□□□□□ -0.76
RTF1-204ENST00000558117 TNFRSF10BO14763 440 aa10.28□□□□□ -0.76
RTF1-204ENST00000558117 PCBP4P57723 403 aaKnown RBP10.28□□□□□ -0.76
RTF1-204ENST00000558117 SYT9Q86SS6 491 aa10.28□□□□□ -0.76
RTF1-204ENST00000558117 EDARADDQ8WWZ3 215 aa10.28□□□□□ -0.76
RTF1-204ENST00000558117 PNMA5Q96PV4 448 aa10.28□□□□□ -0.76
RTF1-204ENST00000558117 DMGDHQ9UI17 866 aaKnown RBP10.28□□□□□ -0.76
RTF1-204ENST00000558117 MAGI3Q5TCQ9 1506 aa10.28□□□□□ -0.76
RTF1-204ENST00000558117 SRCAPQ6ZRS2 3230 aa10.27□□□□□ -0.77
RTF1-204ENST00000558117 ARHGEF15O94989 841 aa10.27□□□□□ -0.77
RTF1-204ENST00000558117 MARSP56192 900 aaKnown RBP10.27□□□□□ -0.77
RTF1-204ENST00000558117 GRIN2CQ14957 1233 aa10.27□□□□□ -0.77
RTF1-204ENST00000558117 ABTB2Q8N961 1025 aa10.27□□□□□ -0.77
RTF1-204ENST00000558117 SLC30A3Q99726 388 aa10.27□□□□□ -0.77
RTF1-204ENST00000558117 ADAMTS8Q9UP79 889 aa10.27□□□□□ -0.77
RTF1-204ENST00000558117 UHRF1BP1LA0JNW5 1464 aa10.26□□□□□ -0.77
RTF1-204ENST00000558117 AMPD1P23109 780 aa10.26□□□□□ -0.77
RTF1-204ENST00000558117 INPP5BP32019 993 aa10.26□□□□□ -0.77
RTF1-204ENST00000558117 RAB44Q7Z6P3 723 aaPredicted RBP10.26□□□□□ -0.77
RTF1-204ENST00000558117 GTF3C2Q8WUA4 911 aaPredicted RBP10.26□□□□□ -0.77
RTF1-204ENST00000558117 BHMTQ93088 406 aa10.26□□□□□ -0.77
RTF1-204ENST00000558117 TRAIPQ9BWF2 469 aa10.26□□□□□ -0.77
RTF1-204ENST00000558117 FAM13BQ9NYF5 915 aa10.26□□□□□ -0.77
RTF1-204ENST00000558117 ETFBKMTQ8IXQ9 262 aa10.25□□□□□ -0.77
RTF1-204ENST00000558117 EFCC1Q9HA90 598 aa10.25□□□□□ -0.77
RTF1-204ENST00000558117 STIM2Q9P246 746 aa10.25□□□□□ -0.77
RTF1-204ENST00000558117 CUL7Q14999 1698 aa10.25□□□□□ -0.77
RTF1-204ENST00000558117 UBAP1LF5GYI3 381 aa10.24□□□□□ -0.77
RTF1-204ENST00000558117 SIN3BO75182 1162 aa10.24□□□□□ -0.77
RTF1-204ENST00000558117 MTMR3Q13615 1198 aa10.24□□□□□ -0.77
RTF1-204ENST00000558117 CCINQ13939 588 aa10.24□□□□□ -0.77
RTF1-204ENST00000558117 PODNQ7Z5L7 613 aa10.24□□□□□ -0.77
RTF1-204ENST00000558117 RIMS1Q86UR5 1692 aaKnown RBP10.24□□□□□ -0.77
RTF1-204ENST00000558117 STRCQ7RTU9 1775 aa10.24□□□□□ -0.77
RTF1-204ENST00000558117 PTPRTO14522 1441 aa10.24□□□□□ -0.77
RTF1-204ENST00000558117 CD109Q6YHK3 1445 aa10.24□□□□□ -0.77
RTF1-204ENST00000558117 ERICH3Q5RHP9 1530 aa10.23□□□□□ -0.77
RTF1-204ENST00000558117 RNF225M0QZC1 329 aaPredicted RBP10.23□□□□□ -0.77
RTF1-204ENST00000558117 ZBTB39O15060 712 aa10.23□□□□□ -0.77
RTF1-204ENST00000558117 BRD1O95696 1058 aa10.23□□□□□ -0.77
RTF1-204ENST00000558117 EPXP11678 715 aa10.23□□□□□ -0.77
RTF1-204ENST00000558117 ARID4AP29374 1257 aaPredicted RBP10.23□□□□□ -0.77
RTF1-204ENST00000558117 TXNDC2Q86VQ3 553 aa10.23□□□□□ -0.77
RTF1-204ENST00000558117 RGL4Q8IZJ4 473 aa10.23□□□□□ -0.77
RTF1-204ENST00000558117 HELQQ8TDG4 1101 aa10.23□□□□□ -0.77
RTF1-204ENST00000558117 ANO2Q9NQ90 1003 aa10.23□□□□□ -0.77
RTF1-204ENST00000558117 RTCBQ9Y3I0 505 aaKnown RBP10.23□□□□□ -0.77
RTF1-204ENST00000558117 ARID4BQ4LE39 1312 aaPredicted RBP10.23□□□□□ -0.77
RTF1-204ENST00000558117 TTBK1Q5TCY1 1321 aaPredicted RBP10.23□□□□□ -0.77
RTF1-204ENST00000558117 ARAP3Q8WWN8 1544 aa10.23□□□□□ -0.77
RTF1-204ENST00000558117 KDM5BQ9UGL1 1544 aa10.23□□□□□ -0.77
RTF1-204ENST00000558117 SHISA8B8ZZ34 492 aa10.22□□□□□ -0.77
RTF1-204ENST00000558117 ALAS2P22557 587 aa10.22□□□□□ -0.77
RTF1-204ENST00000558117 HSPA1LP34931 641 aa10.22□□□□□ -0.77
RTF1-204ENST00000558117 SERPINB4P48594 390 aa10.22□□□□□ -0.77
RTF1-204ENST00000558117 TBC1D8BQ0IIM8 1120 aa10.22□□□□□ -0.77
RTF1-204ENST00000558117 C1orf229Q6ZS94 237 aaPredicted RBP10.22□□□□□ -0.77
RTF1-204ENST00000558117 FCHSD1Q86WN1 690 aa10.22□□□□□ -0.77
RTF1-204ENST00000558117 CMTR1Q8N1G2 835 aaKnown RBP10.22□□□□□ -0.77
RTF1-204ENST00000558117 RRAGCQ9HB90 399 aa10.22□□□□□ -0.77
RTF1-204ENST00000558117 KLF15Q9UIH9 416 aa10.22□□□□□ -0.77
RTF1-204ENST00000558117 OPLAHO14841 1288 aa10.21□□□□□ -0.77
RTF1-204ENST00000558117 ABL1P00519 1130 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms