RNA–Protein interactions for RNA: ENST00000557765.1

GABRB3-213, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-213ENST00000557765 TTC41PQ6P2S7 1318 aa12.95□□□□□ -0.34
GABRB3-213ENST00000557765 MROH5Q6ZUA9 1318 aa12.95□□□□□ -0.34
GABRB3-213ENST00000557765 KLRG2A4D1S0 409 aaPredicted RBP12.95□□□□□ -0.34
GABRB3-213ENST00000557765 PTPN12Q05209 780 aaKnown RBP12.95□□□□□ -0.34
GABRB3-213ENST00000557765 NFIXQ14938 502 aa12.95□□□□□ -0.34
GABRB3-213ENST00000557765 GRIPAP1Q4V328 841 aa12.95□□□□□ -0.34
GABRB3-213ENST00000557765 PNPLA7Q6ZV29 1317 aa12.94□□□□□ -0.34
GABRB3-213ENST00000557765 NRXN2Q9P2S2 1712 aa12.94□□□□□ -0.34
GABRB3-213ENST00000557765 ERC2O15083 957 aa12.94□□□□□ -0.34
GABRB3-213ENST00000557765 NPHP1O15259 732 aa12.94□□□□□ -0.34
GABRB3-213ENST00000557765 PHF14O94880 888 aa12.94□□□□□ -0.34
GABRB3-213ENST00000557765 PDE6BP35913 854 aa12.94□□□□□ -0.34
GABRB3-213ENST00000557765 RFX5P48382 616 aaPredicted RBP12.94□□□□□ -0.34
GABRB3-213ENST00000557765 OS9Q13438 667 aaPredicted RBP12.94□□□□□ -0.34
GABRB3-213ENST00000557765 ZNF827Q17R98 1081 aa12.94□□□□□ -0.34
GABRB3-213ENST00000557765 TAF7LQ5H9L4 462 aa12.94□□□□□ -0.34
GABRB3-213ENST00000557765 ANKRD45Q5TZF3 282 aa12.94□□□□□ -0.34
GABRB3-213ENST00000557765 RHPN1Q8TCX5 695 aa12.94□□□□□ -0.34
GABRB3-213ENST00000557765 BRIP1Q9BX63 1249 aa12.94□□□□□ -0.34
GABRB3-213ENST00000557765 PARP3Q9Y6F1 533 aa12.94□□□□□ -0.34
GABRB3-213ENST00000557765 ABCC12Q96J65 1359 aa12.94□□□□□ -0.34
GABRB3-213ENST00000557765 EYA2O00167 538 aa12.93□□□□□ -0.34
GABRB3-213ENST00000557765 IGHMBP2P38935 993 aaKnown RBP12.93□□□□□ -0.34
GABRB3-213ENST00000557765 KCNQ4P56696 695 aa12.93□□□□□ -0.34
GABRB3-213ENST00000557765 CRY2Q49AN0 593 aa12.93□□□□□ -0.34
GABRB3-213ENST00000557765 TMED8Q6PL24 325 aaPredicted RBP12.93□□□□□ -0.34
GABRB3-213ENST00000557765 COL23A1Q86Y22 540 aaPredicted RBP12.93□□□□□ -0.34
GABRB3-213ENST00000557765 STAP2Q9UGK3 403 aa12.93□□□□□ -0.34
GABRB3-213ENST00000557765 LRP5O75197 1615 aa12.92□□□□□ -0.34
GABRB3-213ENST00000557765 POLRMTO00411 1230 aaKnown RBP12.92□□□□□ -0.34
GABRB3-213ENST00000557765 SERPINB2P05120 415 aa12.92□□□□□ -0.34
GABRB3-213ENST00000557765 ITGA6P23229 1130 aa12.92□□□□□ -0.34
GABRB3-213ENST00000557765 HOXA10P31260 410 aaPredicted RBP12.92□□□□□ -0.34
GABRB3-213ENST00000557765 BMP2KLQ5H9B9 411 aa12.92□□□□□ -0.34
GABRB3-213ENST00000557765 UPF1Q92900 1129 aaKnown RBP eCLIP12.92□□□□□ -0.34
GABRB3-213ENST00000557765 MPHOSPH8Q99549 860 aa12.92□□□□□ -0.34
GABRB3-213ENST00000557765 BSDC1Q9NW68 430 aaPredicted RBP12.92□□□□□ -0.34
GABRB3-213ENST00000557765 CEP126Q9P2H0 1117 aa12.92□□□□□ -0.34
GABRB3-213ENST00000557765 SRP68Q9UHB9 627 aaKnown RBP12.92□□□□□ -0.34
GABRB3-213ENST00000557765 DDX60Q8IY21 1712 aaKnown RBP12.91□□□□□ -0.34
GABRB3-213ENST00000557765 BBOX1O75936 387 aa12.91□□□□□ -0.34
GABRB3-213ENST00000557765 ALDH1B1P30837 517 aa12.91□□□□□ -0.34
GABRB3-213ENST00000557765 LDHAL6AQ6ZMR3 332 aa12.91□□□□□ -0.34
GABRB3-213ENST00000557765 DDX46Q7L014 1031 aaKnown RBP12.91□□□□□ -0.34
GABRB3-213ENST00000557765 IL27Q8NEV9 243 aa12.91□□□□□ -0.34
GABRB3-213ENST00000557765 CRAMP1Q96RY5 1269 aa12.91□□□□□ -0.34
GABRB3-213ENST00000557765 ANKRD2Q9GZV1 360 aa12.91□□□□□ -0.34
GABRB3-213ENST00000557765 EPHA10Q5JZY3 1008 aa12.9□□□□□ -0.34
GABRB3-213ENST00000557765 PRR5LQ6MZQ0 368 aa12.9□□□□□ -0.34
GABRB3-213ENST00000557765 ANKRD18AQ8IVF6 992 aa12.9□□□□□ -0.34
GABRB3-213ENST00000557765 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.9□□□□□ -0.34
GABRB3-213ENST00000557765 RBM17Q96I25 401 aaKnown RBP12.9□□□□□ -0.34
GABRB3-213ENST00000557765 ZNF512BQ96KM6 892 aaPredicted RBP12.9□□□□□ -0.34
GABRB3-213ENST00000557765 CHMP3Q9Y3E7 222 aa12.9□□□□□ -0.34
GABRB3-213ENST00000557765 GLRX3O76003 335 aaKnown RBP12.89□□□□□ -0.35
GABRB3-213ENST00000557765 IFIT2P09913 472 aaKnown RBP12.89□□□□□ -0.35
GABRB3-213ENST00000557765 MX1P20591 662 aa12.89□□□□□ -0.35
GABRB3-213ENST00000557765 LRRFIP1Q32MZ4 808 aaKnown RBP12.89□□□□□ -0.35
GABRB3-213ENST00000557765 ERFEQ4G0M1 354 aa12.89□□□□□ -0.35
GABRB3-213ENST00000557765 MTFR1LQ9H019 292 aa12.89□□□□□ -0.35
GABRB3-213ENST00000557765 TMX4Q9H1E5 349 aaPredicted RBP12.89□□□□□ -0.35
GABRB3-213ENST00000557765 EXOC6BQ9Y2D4 811 aa12.89□□□□□ -0.35
GABRB3-213ENST00000557765 TUBGCP6Q96RT7 1819 aa12.89□□□□□ -0.35
GABRB3-213ENST00000557765 MSH5O43196 834 aa12.88□□□□□ -0.35
GABRB3-213ENST00000557765 EPB41L2O43491 1005 aaKnown RBP12.88□□□□□ -0.35
GABRB3-213ENST00000557765 RPS8P62241 208 aaKnown RBP12.88□□□□□ -0.35
GABRB3-213ENST00000557765 FAM161AQ3B820 660 aa12.88□□□□□ -0.35
GABRB3-213ENST00000557765 CC2D2BQ6DHV5 1058 aa12.88□□□□□ -0.35
GABRB3-213ENST00000557765 CASC1Q6TDU7 716 aa12.88□□□□□ -0.35
GABRB3-213ENST00000557765 RPGRQ92834 1020 aaKnown RBP12.88□□□□□ -0.35
GABRB3-213ENST00000557765 LNPKQ9C0E8 428 aa12.88□□□□□ -0.35
GABRB3-213ENST00000557765 GREM2Q9H772 168 aa12.88□□□□□ -0.35
GABRB3-213ENST00000557765 CNNM1Q9NRU3 951 aa12.88□□□□□ -0.35
GABRB3-213ENST00000557765 RIPOR2Q9Y4F9 1068 aa12.88□□□□□ -0.35
GABRB3-213ENST00000557765 PDE8BO95263 885 aa12.87□□□□□ -0.35
GABRB3-213ENST00000557765 NPR1P16066 1061 aa12.87□□□□□ -0.35
GABRB3-213ENST00000557765 POLD1P28340 1107 aa12.87□□□□□ -0.35
GABRB3-213ENST00000557765 PDE1AP54750 535 aa12.87□□□□□ -0.35
GABRB3-213ENST00000557765 GRAPQ13588 217 aa12.87□□□□□ -0.35
GABRB3-213ENST00000557765 UBE4AQ14139 1066 aa12.87□□□□□ -0.35
GABRB3-213ENST00000557765 PUM3Q15397 648 aaKnown RBP12.87□□□□□ -0.35
GABRB3-213ENST00000557765 BICDL1Q6ZP65 573 aa12.87□□□□□ -0.35
GABRB3-213ENST00000557765 ATG9AQ7Z3C6 839 aa12.87□□□□□ -0.35
GABRB3-213ENST00000557765 AMIGO3Q86WK7 504 aa12.87□□□□□ -0.35
GABRB3-213ENST00000557765 GRAPLQ8TC17 118 aaPredicted RBP12.87□□□□□ -0.35
GABRB3-213ENST00000557765 LPIN2Q92539 896 aa12.87□□□□□ -0.35
GABRB3-213ENST00000557765 ECHDC1Q9NTX5 307 aa12.87□□□□□ -0.35
GABRB3-213ENST00000557765 SALL3Q9BXA9 1300 aa12.87□□□□□ -0.35
GABRB3-213ENST00000557765 RFX7Q2KHR2 1363 aa12.86□□□□□ -0.35
GABRB3-213ENST00000557765 HIP1O00291 1037 aa12.86□□□□□ -0.35
GABRB3-213ENST00000557765 SASH1O94885 1247 aa12.86□□□□□ -0.35
GABRB3-213ENST00000557765 MMP10P09238 476 aa12.86□□□□□ -0.35
GABRB3-213ENST00000557765 HCLS1P14317 486 aaPredicted RBP12.86□□□□□ -0.35
GABRB3-213ENST00000557765 TNNI3KQ59H18 835 aa12.86□□□□□ -0.35
GABRB3-213ENST00000557765 STYK1Q6J9G0 422 aa12.86□□□□□ -0.35
GABRB3-213ENST00000557765 DEFB132Q7Z7B7 95 aa12.86□□□□□ -0.35
GABRB3-213ENST00000557765 NUTM1Q86Y26 1132 aa12.86□□□□□ -0.35
GABRB3-213ENST00000557765 PLEKHM2Q8IWE5 1019 aa12.86□□□□□ -0.35
GABRB3-213ENST00000557765 ANO8Q9HCE9 1232 aaPredicted RBP12.86□□□□□ -0.35
GABRB3-213ENST00000557765 FPGT-TNNI3KV9GXZ4 949 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms