RNA–Protein interactions for RNA: ENST00000557654.5

GPHN-215, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 503 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-215ENST00000557654 PIK3R5Q8WYR1 880 aa9.6□□□□□ -0.87
GPHN-215ENST00000557654 SLC6A14Q9UN76 642 aa9.6□□□□□ -0.87
GPHN-215ENST00000557654 ZBTB42B2RXF5 422 aa9.59□□□□□ -0.87
GPHN-215ENST00000557654 UBAP1LF5GYI3 381 aa9.59□□□□□ -0.87
GPHN-215ENST00000557654 KCNMA1Q12791 1236 aa9.59□□□□□ -0.87
GPHN-215ENST00000557654 NOM1Q5C9Z4 860 aaKnown RBP9.59□□□□□ -0.87
GPHN-215ENST00000557654 B4GALNT3Q6L9W6 998 aa9.59□□□□□ -0.87
GPHN-215ENST00000557654 DHX32Q7L7V1 743 aaKnown RBP9.59□□□□□ -0.87
GPHN-215ENST00000557654 EDEM1Q92611 657 aa9.59□□□□□ -0.87
GPHN-215ENST00000557654 NUDT16Q96DE0 195 aaKnown RBP9.59□□□□□ -0.87
GPHN-215ENST00000557654 SUV39H2Q9H5I1 410 aa9.59□□□□□ -0.87
GPHN-215ENST00000557654 NAGPAQ9UK23 515 aa9.59□□□□□ -0.87
GPHN-215ENST00000557654 MTMR7Q9Y216 660 aa9.59□□□□□ -0.87
GPHN-215ENST00000557654 DNM1Q05193 864 aaKnown RBP9.58□□□□□ -0.88
GPHN-215ENST00000557654 EFCC1Q9HA90 598 aa9.58□□□□□ -0.88
GPHN-215ENST00000557654 MKL2Q9ULH7 1088 aa9.58□□□□□ -0.88
GPHN-215ENST00000557654 A6NHS1 94 aa9.57□□□□□ -0.88
GPHN-215ENST00000557654 RNF225M0QZC1 329 aaPredicted RBP9.57□□□□□ -0.88
GPHN-215ENST00000557654 M0R082 166 aa9.57□□□□□ -0.88
GPHN-215ENST00000557654 MMP20O60882 483 aa9.57□□□□□ -0.88
GPHN-215ENST00000557654 MAP3K6O95382 1288 aa9.57□□□□□ -0.88
GPHN-215ENST00000557654 ARID4AP29374 1257 aaPredicted RBP9.57□□□□□ -0.88
GPHN-215ENST00000557654 RASSF7Q02833 373 aa9.57□□□□□ -0.88
GPHN-215ENST00000557654 HFE2Q6ZVN8 426 aa9.57□□□□□ -0.88
GPHN-215ENST00000557654 ZNF417Q8TAU3 575 aa9.57□□□□□ -0.88
GPHN-215ENST00000557654 ZNF587Q96SQ5 575 aaPredicted RBP9.57□□□□□ -0.88
GPHN-215ENST00000557654 C11orf16Q9NQ32 467 aa9.57□□□□□ -0.88
GPHN-215ENST00000557654 FAM13BQ9NYF5 915 aa9.57□□□□□ -0.88
GPHN-215ENST00000557654 PHF20L1A8MW92 1017 aa9.56□□□□□ -0.88
GPHN-215ENST00000557654 CPB1P15086 417 aa9.56□□□□□ -0.88
GPHN-215ENST00000557654 FKBP4Q02790 459 aaKnown RBP eCLIP9.56□□□□□ -0.88
GPHN-215ENST00000557654 MICALL1Q8N3F8 863 aa9.56□□□□□ -0.88
GPHN-215ENST00000557654 NUDT8Q8WV74 236 aa9.56□□□□□ -0.88
GPHN-215ENST00000557654 H3BRB1 525 aa9.55□□□□□ -0.88
GPHN-215ENST00000557654 PDGFAP04085 211 aa9.55□□□□□ -0.88
GPHN-215ENST00000557654 NPR3P17342 541 aa9.55□□□□□ -0.88
GPHN-215ENST00000557654 AAMPQ13685 434 aa9.55□□□□□ -0.88
GPHN-215ENST00000557654 C20orf204Q6ZNR8 217 aa9.55□□□□□ -0.88
GPHN-215ENST00000557654 FAM35AQ86V20 835 aa9.55□□□□□ -0.88
GPHN-215ENST00000557654 TXNDC2Q86VQ3 553 aa9.55□□□□□ -0.88
GPHN-215ENST00000557654 NLRP13Q86W25 1043 aa9.55□□□□□ -0.88
GPHN-215ENST00000557654 TRIM11Q96F44 468 aa9.55□□□□□ -0.88
GPHN-215ENST00000557654 TUT1Q9H6E5 874 aaKnown RBP9.55□□□□□ -0.88
GPHN-215ENST00000557654 TLR7Q9NYK1 1049 aaKnown RBP9.55□□□□□ -0.88
GPHN-215ENST00000557654 COL8A1P27658 744 aa9.54□□□□□ -0.88
GPHN-215ENST00000557654 SF3B2Q13435 895 aaKnown RBP9.54□□□□□ -0.88
GPHN-215ENST00000557654 PSAPL1Q6NUJ1 521 aa9.54□□□□□ -0.88
GPHN-215ENST00000557654 TRPM4Q8TD43 1214 aa9.54□□□□□ -0.88
GPHN-215ENST00000557654 NSUN5Q96P11 429 aaKnown RBP9.54□□□□□ -0.88
GPHN-215ENST00000557654 GGNBP2Q9H3C7 697 aa9.54□□□□□ -0.88
GPHN-215ENST00000557654 POLIQ9UNA4 740 aa9.54□□□□□ -0.88
GPHN-215ENST00000557654 J3QW42 95 aa9.53□□□□□ -0.88
GPHN-215ENST00000557654 GNB5O14775 395 aa9.53□□□□□ -0.88
GPHN-215ENST00000557654 ICMTO60725 284 aa9.53□□□□□ -0.88
GPHN-215ENST00000557654 FAM13AO94988 1023 aa9.53□□□□□ -0.88
GPHN-215ENST00000557654 GDF11O95390 407 aa9.53□□□□□ -0.88
GPHN-215ENST00000557654 GPLD1P80108 840 aa9.53□□□□□ -0.88
GPHN-215ENST00000557654 PLAURQ03405 335 aa9.53□□□□□ -0.88
GPHN-215ENST00000557654 PDE4CQ08493 712 aa9.53□□□□□ -0.88
GPHN-215ENST00000557654 COL9A3Q14050 684 aaPredicted RBP9.53□□□□□ -0.88
GPHN-215ENST00000557654 KANK3Q6NY19 840 aa9.53□□□□□ -0.88
GPHN-215ENST00000557654 CCDC87Q9NVE4 849 aa9.53□□□□□ -0.88
GPHN-215ENST00000557654 TMEM63CQ9P1W3 806 aa9.53□□□□□ -0.88
GPHN-215ENST00000557654 FZD6O60353 706 aa9.52□□□□□ -0.89
GPHN-215ENST00000557654 PSAPP07602 524 aa9.52□□□□□ -0.89
GPHN-215ENST00000557654 MZF1P28698 734 aaPredicted RBP9.52□□□□□ -0.89
GPHN-215ENST00000557654 ECM1Q16610 540 aa9.52□□□□□ -0.89
GPHN-215ENST00000557654 C8orf34Q49A92 452 aa9.52□□□□□ -0.89
GPHN-215ENST00000557654 PERM1Q5SV97 790 aa9.52□□□□□ -0.89
GPHN-215ENST00000557654 JPH1Q9HDC5 661 aaPredicted RBP9.52□□□□□ -0.89
GPHN-215ENST00000557654 FNDC3AQ9Y2H6 1198 aaKnown RBP9.52□□□□□ -0.89
GPHN-215ENST00000557654 CYP2E1P05181 493 aaPredicted RBP9.51□□□□□ -0.89
GPHN-215ENST00000557654 NRLP54845 237 aa9.51□□□□□ -0.89
GPHN-215ENST00000557654 COL13A1Q5TAT6 717 aaPredicted RBP9.51□□□□□ -0.89
GPHN-215ENST00000557654 ALKBH2Q6NS38 261 aa9.51□□□□□ -0.89
GPHN-215ENST00000557654 GLYCTKQ8IVS8 523 aa9.51□□□□□ -0.89
GPHN-215ENST00000557654 TMEM151AQ8N4L1 468 aa9.51□□□□□ -0.89
GPHN-215ENST00000557654 LPIN3Q9BQK8 851 aa9.51□□□□□ -0.89
GPHN-215ENST00000557654 EGFL7Q9UHF1 273 aa9.51□□□□□ -0.89
GPHN-215ENST00000557654 ZNF438Q7Z4V0 828 aa9.5□□□□□ -0.89
GPHN-215ENST00000557654 DCAF5Q96JK2 942 aa9.5□□□□□ -0.89
GPHN-215ENST00000557654 PLVAPQ9BX97 442 aa9.5□□□□□ -0.89
GPHN-215ENST00000557654 ELP3Q9H9T3 547 aa9.5□□□□□ -0.89
GPHN-215ENST00000557654 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.5□□□□□ -0.89
GPHN-215ENST00000557654 LILRB5O75023 590 aa9.49□□□□□ -0.89
GPHN-215ENST00000557654 NID1P14543 1247 aa9.49□□□□□ -0.89
GPHN-215ENST00000557654 EIF2AK2P19525 551 aaKnown RBP9.49□□□□□ -0.89
GPHN-215ENST00000557654 TTC39BQ5VTQ0 682 aaPredicted RBP9.49□□□□□ -0.89
GPHN-215ENST00000557654 OR13H1Q8NG92 308 aa9.49□□□□□ -0.89
GPHN-215ENST00000557654 ABI2Q9NYB9 513 aaPredicted RBP9.49□□□□□ -0.89
GPHN-215ENST00000557654 CNTN3Q9P232 1028 aa9.49□□□□□ -0.89
GPHN-215ENST00000557654 LOC102724428A0A0B4J2F2 783 aa9.48□□□□□ -0.89
GPHN-215ENST00000557654 RGS9O75916 674 aaPredicted RBP9.48□□□□□ -0.89
GPHN-215ENST00000557654 BRD1O95696 1058 aa9.48□□□□□ -0.89
GPHN-215ENST00000557654 SIK1P57059 783 aa9.48□□□□□ -0.89
GPHN-215ENST00000557654 ELMSAN1Q6PJG2 1045 aa9.48□□□□□ -0.89
GPHN-215ENST00000557654 KCTD17Q8N5Z5 321 aa9.48□□□□□ -0.89
GPHN-215ENST00000557654 SMG9Q9H0W8 520 aaKnown RBP9.48□□□□□ -0.89
GPHN-215ENST00000557654 PRDM6Q9NQX0 595 aa9.48□□□□□ -0.89
GPHN-215ENST00000557654 FAM229AH3BQW9 127 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms