RNA–Protein interactions for RNA: ENST00000557585.5

PRKCH-226, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-226ENST00000557585 C7orf43Q8WVR3 580 aa13.34□□□□□ -0.27
PRKCH-226ENST00000557585 CWC25Q9NXE8 425 aaPredicted RBP13.34□□□□□ -0.27
PRKCH-226ENST00000557585 NOB1Q9ULX3 412 aaKnown RBP13.34□□□□□ -0.27
PRKCH-226ENST00000557585 NFKBIEO00221 500 aa13.33□□□□□ -0.28
PRKCH-226ENST00000557585 PCCAP05165 728 aaPredicted RBP13.33□□□□□ -0.28
PRKCH-226ENST00000557585 CASP7P55210 303 aa13.33□□□□□ -0.28
PRKCH-226ENST00000557585 GCKRQ14397 625 aa13.33□□□□□ -0.28
PRKCH-226ENST00000557585 ZBTB38Q8NAP3 1195 aaPredicted RBP13.33□□□□□ -0.28
PRKCH-226ENST00000557585 CHMP4AQ9BY43 222 aa13.33□□□□□ -0.28
PRKCH-226ENST00000557585 SEC31BQ9NQW1 1179 aa13.33□□□□□ -0.28
PRKCH-226ENST00000557585 SLX4Q8IY92 1834 aa13.33□□□□□ -0.28
PRKCH-226ENST00000557585 H7C1W4 665 aa13.32□□□□□ -0.28
PRKCH-226ENST00000557585 GRIN3BO60391 1043 aa13.32□□□□□ -0.28
PRKCH-226ENST00000557585 UBE3BQ7Z3V4 1068 aa13.32□□□□□ -0.28
PRKCH-226ENST00000557585 NLRP3Q96P20 1036 aa13.32□□□□□ -0.28
PRKCH-226ENST00000557585 ABCC4O15439 1325 aa13.32□□□□□ -0.28
PRKCH-226ENST00000557585 DLEC1Q9Y238 1755 aa13.32□□□□□ -0.28
PRKCH-226ENST00000557585 RIC1Q4ADV7 1423 aa13.31□□□□□ -0.28
PRKCH-226ENST00000557585 DDX60Q8IY21 1712 aaKnown RBP13.31□□□□□ -0.28
PRKCH-226ENST00000557585 GOLGB1Q14789 3259 aaKnown RBP13.31□□□□□ -0.28
PRKCH-226ENST00000557585 HOXA10P31260 410 aaPredicted RBP13.31□□□□□ -0.28
PRKCH-226ENST00000557585 ALDH1L2Q3SY69 923 aa13.31□□□□□ -0.28
PRKCH-226ENST00000557585 EPHA10Q5JZY3 1008 aa13.31□□□□□ -0.28
PRKCH-226ENST00000557585 LINS1Q8NG48 757 aa13.31□□□□□ -0.28
PRKCH-226ENST00000557585 RPGRQ92834 1020 aaKnown RBP13.31□□□□□ -0.28
PRKCH-226ENST00000557585 CNKSR1Q969H4 720 aa13.31□□□□□ -0.28
PRKCH-226ENST00000557585 UTRNP46939 3433 aa13.3□□□□□ -0.28
PRKCH-226ENST00000557585 YY1P25490 414 aa13.3□□□□□ -0.28
PRKCH-226ENST00000557585 NEXNQ0ZGT2 675 aa13.3□□□□□ -0.28
PRKCH-226ENST00000557585 CELF1Q92879 486 aaKnown RBP13.3□□□□□ -0.28
PRKCH-226ENST00000557585 LAMB2P55268 1798 aa13.3□□□□□ -0.28
PRKCH-226ENST00000557585 RBM17Q96I25 401 aaKnown RBP13.29□□□□□ -0.28
PRKCH-226ENST00000557585 TAF1P21675 1872 aa13.29□□□□□ -0.28
PRKCH-226ENST00000557585 WTIPA6NIX2 430 aaPredicted RBP13.28□□□□□ -0.28
PRKCH-226ENST00000557585 PPEF1O14829 653 aaPredicted RBP13.28□□□□□ -0.28
PRKCH-226ENST00000557585 CT47B1P0C2W7 299 aaPredicted RBP13.28□□□□□ -0.28
PRKCH-226ENST00000557585 NBPF7P0C2Y1 421 aaPredicted RBP13.28□□□□□ -0.28
PRKCH-226ENST00000557585 SF3B3Q15393 1217 aaKnown RBP13.28□□□□□ -0.28
PRKCH-226ENST00000557585 C9orf131Q5VYM1 1079 aa13.28□□□□□ -0.28
PRKCH-226ENST00000557585 FRAT1Q92837 279 aaPredicted RBP13.28□□□□□ -0.28
PRKCH-226ENST00000557585 CLUAP1Q96AJ1 413 aa13.28□□□□□ -0.28
PRKCH-226ENST00000557585 KAZALD1Q96I82 304 aa13.28□□□□□ -0.28
PRKCH-226ENST00000557585 CRAMP1Q96RY5 1269 aa13.28□□□□□ -0.28
PRKCH-226ENST00000557585 SRCIN1Q9C0H9 1055 aa13.28□□□□□ -0.28
PRKCH-226ENST00000557585 PDZRN3Q9UPQ7 1066 aa13.28□□□□□ -0.28
PRKCH-226ENST00000557585 RNF123Q5XPI4 1314 aa13.28□□□□□ -0.28
PRKCH-226ENST00000557585 CDHR2Q9BYE9 1310 aa13.28□□□□□ -0.28
PRKCH-226ENST00000557585 SNED1Q8TER0 1413 aa13.28□□□□□ -0.28
PRKCH-226ENST00000557585 CACNA1SQ13698 1873 aa13.27□□□□□ -0.28
PRKCH-226ENST00000557585 PDE8AO60658 829 aa13.27□□□□□ -0.29
PRKCH-226ENST00000557585 CTSWP56202 376 aa13.27□□□□□ -0.29
PRKCH-226ENST00000557585 FOXO4P98177 505 aa13.27□□□□□ -0.29
PRKCH-226ENST00000557585 TTLL11Q8NHH1 800 aa13.27□□□□□ -0.29
PRKCH-226ENST00000557585 SUCLG2Q96I99 432 aa13.27□□□□□ -0.29
PRKCH-226ENST00000557585 GREM2Q9H772 168 aa13.27□□□□□ -0.29
PRKCH-226ENST00000557585 PTPRCP08575 1304 aa13.27□□□□□ -0.29
PRKCH-226ENST00000557585 TRIM27P14373 513 aa13.26□□□□□ -0.29
PRKCH-226ENST00000557585 BRPF1P55201 1214 aaPredicted RBP13.26□□□□□ -0.29
PRKCH-226ENST00000557585 GRAPQ13588 217 aa13.26□□□□□ -0.29
PRKCH-226ENST00000557585 DDX46Q7L014 1031 aaKnown RBP13.26□□□□□ -0.29
PRKCH-226ENST00000557585 ZNF579Q8NAF0 562 aaKnown RBP13.26□□□□□ -0.29
PRKCH-226ENST00000557585 GRAPLQ8TC17 118 aaPredicted RBP13.26□□□□□ -0.29
PRKCH-226ENST00000557585 GPR101Q96P66 508 aaPredicted RBP13.26□□□□□ -0.29
PRKCH-226ENST00000557585 ZNF277Q9NRM2 450 aaPredicted RBP13.26□□□□□ -0.29
PRKCH-226ENST00000557585 RNF181Q9P0P0 153 aa13.26□□□□□ -0.29
PRKCH-226ENST00000557585 ARFGEF1Q9Y6D6 1849 aa13.26□□□□□ -0.29
PRKCH-226ENST00000557585 COL4A5P29400 1685 aa13.25□□□□□ -0.29
PRKCH-226ENST00000557585 GRM8O00222 908 aa13.25□□□□□ -0.29
PRKCH-226ENST00000557585 ALDH1L1O75891 902 aa13.25□□□□□ -0.29
PRKCH-226ENST00000557585 RLBP1P12271 317 aa13.25□□□□□ -0.29
PRKCH-226ENST00000557585 ALDH1B1P30837 517 aa13.25□□□□□ -0.29
PRKCH-226ENST00000557585 CLCN6P51797 869 aa13.25□□□□□ -0.29
PRKCH-226ENST00000557585 FAM161AQ3B820 660 aa13.25□□□□□ -0.29
PRKCH-226ENST00000557585 ZNF526Q8TF50 670 aaPredicted RBP13.25□□□□□ -0.29
PRKCH-226ENST00000557585 USP44Q9H0E7 712 aa13.25□□□□□ -0.29
PRKCH-226ENST00000557585 PLIN1O60240 522 aa13.24□□□□□ -0.29
PRKCH-226ENST00000557585 CCDC93Q567U6 631 aa13.24□□□□□ -0.29
PRKCH-226ENST00000557585 ZNF784Q8NCA9 323 aaPredicted RBP13.24□□□□□ -0.29
PRKCH-226ENST00000557585 ATP6V0A2Q9Y487 856 aa13.24□□□□□ -0.29
PRKCH-226ENST00000557585 CSF1RP07333 972 aa13.23□□□□□ -0.29
PRKCH-226ENST00000557585 GPSM2P81274 684 aa13.23□□□□□ -0.29
PRKCH-226ENST00000557585 LMBR1LQ6UX01 489 aa13.23□□□□□ -0.29
PRKCH-226ENST00000557585 PLCD3Q8N3E9 789 aa13.23□□□□□ -0.29
PRKCH-226ENST00000557585 ANKRD44Q8N8A2 993 aa13.23□□□□□ -0.29
PRKCH-226ENST00000557585 ZNF594Q96JF6 807 aaPredicted RBP13.23□□□□□ -0.29
PRKCH-226ENST00000557585 PLA2G12BQ9BX93 195 aa13.23□□□□□ -0.29
PRKCH-226ENST00000557585 C9orf78Q9NZ63 289 aaPredicted RBP13.23□□□□□ -0.29
PRKCH-226ENST00000557585 UTYO14607 1347 aa13.22□□□□□ -0.29
PRKCH-226ENST00000557585 RPS8P62241 208 aaKnown RBP13.22□□□□□ -0.29
PRKCH-226ENST00000557585 CCDC152Q4G0S7 254 aa13.22□□□□□ -0.29
PRKCH-226ENST00000557585 MEIS3Q99687 375 aa13.22□□□□□ -0.29
PRKCH-226ENST00000557585 API5Q9BZZ5 524 aaKnown RBP13.22□□□□□ -0.29
PRKCH-226ENST00000557585 TAOK3Q9H2K8 898 aa13.22□□□□□ -0.29
PRKCH-226ENST00000557585 BICC1Q9H694 974 aaKnown RBP13.22□□□□□ -0.29
PRKCH-226ENST00000557585 CACNA1FO60840 1977 aa13.21□□□□□ -0.29
PRKCH-226ENST00000557585 KIF16BQ96L93 1317 aa13.21□□□□□ -0.29
PRKCH-226ENST00000557585 SNAP23O00161 211 aa13.21□□□□□ -0.29
PRKCH-226ENST00000557585 BBOX1O75936 387 aa13.21□□□□□ -0.29
PRKCH-226ENST00000557585 LMNB1P20700 586 aa13.21□□□□□ -0.29
PRKCH-226ENST00000557585 ITGA6P23229 1130 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms